Click here to switch to the map view.

The map label for this gene is ssb2 [H]

Identifier: 218903309

GI number: 218903309

Start: 2077978

End: 2078316

Strand: Direct

Name: ssb2 [H]

Synonym: BCAH820_2193

Alternate gene names: 218903309

Gene position: 2077978-2078316 (Clockwise)

Preceding gene: 218903308

Following gene: 218903310

Centisome position: 39.19

GC content: 39.53

Gene sequence:

>339_bases
ATGATGAATCGAGTTGTATTAATCGGTAGATTGACAAAGGATCCAGAATTATACTACACAAAGCAAGGCGTCGCATATGC
ACGAGTATATGTTGCGGTGAATAGAGGTTTTCGAAATAGTTTAGGTGAGCAACAAGTCGATTTTATTAATTGTGTCGTAT
GGCGAAAATCGGCTGAGAATGTAACCGAATATTGTACGAAAGGGTCCCTTGTTGGAATTACTGGACGTATTCATACGAGG
AATTACGAGGATGATCAAGGAAAGAGAATATATATAACGGAAGTCGTGATTGAGAGCATTACATTTTTGGAGAGAAGGCG
GGAGGGTGCATCACAATAA

Upstream 100 bases:

>100_bases
ATGAAATAATTTTTTTACTATAAAATATATTATTTTACACTTTTTACCTCTCACACATTTTTCTTTACAATAAAGAAAAA
TGTGTGAGGTGGTATAAATT

Downstream 100 bases:

>100_bases
GATGGGCCTTGAGGAAATTAAAGTATGATGGTGGAAAGAAATCAGCAAAATAAAGCATCCGAGTAGGAGTATAGAGTGGT
AACATGTTACAATACAGCTA

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB 3; Helix-destabilizing protein 3 [H]

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MMNRVVLIGRLTKDPELYYTKQGVAYARVYVAVNRGFRNSLGEQQVDFINCVVWRKSAENVTEYCTKGSLVGITGRIHTR
NYEDDQGKRIYITEVVIESITFLERRREGASQ

Sequences:

>Translated_112_residues
MMNRVVLIGRLTKDPELYYTKQGVAYARVYVAVNRGFRNSLGEQQVDFINCVVWRKSAENVTEYCTKGSLVGITGRIHTR
NYEDDQGKRIYITEVVIESITFLERRREGASQ
>Mature_112_residues
MMNRVVLIGRLTKDPELYYTKQGVAYARVYVAVNRGFRNSLGEQQVDFINCVVWRKSAENVTEYCTKGSLVGITGRIHTR
NYEDDQGKRIYITEVVIESITFLERRREGASQ

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=99, Percent_Identity=38.3838383838384, Blast_Score=68, Evalue=1e-13,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 12940; Mature: 12940

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNRVVLIGRLTKDPELYYTKQGVAYARVYVAVNRGFRNSLGEQQVDFINCVVWRKSAEN
CCCCEEEEEECCCCCCEEEECCCCEEEEEEEEECCCHHCCCCCHHHHHHHHEEECCCCHH
VTEYCTKGSLVGITGRIHTRNYEDDQGKRIYITEVVIESITFLERRREGASQ
HHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMNRVVLIGRLTKDPELYYTKQGVAYARVYVAVNRGFRNSLGEQQVDFINCVVWRKSAEN
CCCCEEEEEECCCCCCEEEECCCCEEEEEEEEECCCHHCCCCCHHHHHHHHEEECCCCHH
VTEYCTKGSLVGITGRIHTRNYEDDQGKRIYITEVVIESITFLERRREGASQ
HHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]