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The map label for this gene is sirB [H]

Identifier: 218903290

GI number: 218903290

Start: 2059233

End: 2059943

Strand: Reverse

Name: sirB [H]

Synonym: BCAH820_2174

Alternate gene names: 218903290

Gene position: 2059943-2059233 (Counterclockwise)

Preceding gene: 218903291

Following gene: 218903289

Centisome position: 38.85

GC content: 35.58

Gene sequence:

>711_bases
ATGAAAGGAATTGTATATGTTGGACACGGTAGTCGCTTGCAAGAGGGTAACGAACAATTCATTCACTTTATTCAATCTGT
TATGAAAGAACGTAACGAAAGAATTCAAAGAATAGCTTTTCTAGAACTAACGACACCTACCATTTCTGATGCAGTTACAG
AAACGATACTAGAGGGAGCAACTGAAATAATGATTGTACCTATTTTATTATTTGCAGTAGCTCACTATAAATGTGATATT
CCTTTTGAGATAGAAAAAATGCAAAAGCAATATCCACATATAACATTTTCAGTTGTACCACCTTTTAGTACGCATCCGCA
TATGGTTGAACTTGTAGTGAAAAGAATACGTGAAGCTATGCCAATGCAAAATAGTAGTATTTTACTCGTAGGAAGAGGTA
GTAGTGACCCCCAGCCGATACATGAGTTACAGCAAATTGGAGTAGCTGTCGAACAAAAACTCGGTATGCGAGTATGTTGT
TCCTTTTTAACGAAAGGAACGCCCTCTTTTACTGCTGAGCTCAAGACTATAACATCGACTGCATCTCATGTATATGTCAT
GCCGTACCTTCTCTTTACTGGATTATTGCTTCAAAAAATTAAGTTGCATACAAAAAAATACGATCACGTTACAACTTGTA
ACTGTCTTCAGTTTGATACATATATGAAATTAACATTACTAGAACGAATGGAGGAATATGTGTATGTATAA

Upstream 100 bases:

>100_bases
ATACCGACGTTCCAACTTTACGCTATGCAAATAAAGTCGGGTTTCATAACATTGATCATCAATTACAAGAAACTCTTATG
CAGAAAGACATGGTAAGACA

Downstream 100 bases:

>100_bases
CATGTACCCTCTTATGTTTAATCTACATAATAAAGTGGTCGTTATCATTGGTGGAGGTAAAATCGCATATCGAAAAGCGT
CTGGATTAAAAGATACAGGC

Product: cbiX domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MKGIVYVGHGSRLQEGNEQFIHFIQSVMKERNERIQRIAFLELTTPTISDAVTETILEGATEIMIVPILLFAVAHYKCDI
PFEIEKMQKQYPHITFSVVPPFSTHPHMVELVVKRIREAMPMQNSSILLVGRGSSDPQPIHELQQIGVAVEQKLGMRVCC
SFLTKGTPSFTAELKTITSTASHVYVMPYLLFTGLLLQKIKLHTKKYDHVTTCNCLQFDTYMKLTLLERMEEYVYV

Sequences:

>Translated_236_residues
MKGIVYVGHGSRLQEGNEQFIHFIQSVMKERNERIQRIAFLELTTPTISDAVTETILEGATEIMIVPILLFAVAHYKCDI
PFEIEKMQKQYPHITFSVVPPFSTHPHMVELVVKRIREAMPMQNSSILLVGRGSSDPQPIHELQQIGVAVEQKLGMRVCC
SFLTKGTPSFTAELKTITSTASHVYVMPYLLFTGLLLQKIKLHTKKYDHVTTCNCLQFDTYMKLTLLERMEEYVYV
>Mature_236_residues
MKGIVYVGHGSRLQEGNEQFIHFIQSVMKERNERIQRIAFLELTTPTISDAVTETILEGATEIMIVPILLFAVAHYKCDI
PFEIEKMQKQYPHITFSVVPPFSTHPHMVELVVKRIREAMPMQNSSILLVGRGSSDPQPIHELQQIGVAVEQKLGMRVCC
SFLTKGTPSFTAELKTITSTASHVYVMPYLLFTGLLLQKIKLHTKKYDHVTTCNCLQFDTYMKLTLLERMEEYVYV

Specific function: Chelates iron to the siroheme precursor [H]

COG id: COG2138

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiX family. SirB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002762 [H]

Pfam domain/function: PF01903 CbiX [H]

EC number: =4.99.1.4 [H]

Molecular weight: Translated: 26980; Mature: 26980

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGIVYVGHGSRLQEGNEQFIHFIQSVMKERNERIQRIAFLELTTPTISDAVTETILEGA
CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCC
TEIMIVPILLFAVAHYKCDIPFEIEKMQKQYPHITFSVVPPFSTHPHMVELVVKRIREAM
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHC
PMQNSSILLVGRGSSDPQPIHELQQIGVAVEQKLGMRVCCSFLTKGTPSFTAELKTITST
CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ASHVYVMPYLLFTGLLLQKIKLHTKKYDHVTTCNCLQFDTYMKLTLLERMEEYVYV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKGIVYVGHGSRLQEGNEQFIHFIQSVMKERNERIQRIAFLELTTPTISDAVTETILEGA
CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCC
TEIMIVPILLFAVAHYKCDIPFEIEKMQKQYPHITFSVVPPFSTHPHMVELVVKRIREAM
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHC
PMQNSSILLVGRGSSDPQPIHELQQIGVAVEQKLGMRVCCSFLTKGTPSFTAELKTITST
CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ASHVYVMPYLLFTGLLLQKIKLHTKKYDHVTTCNCLQFDTYMKLTLLERMEEYVYV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA