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The map label for this gene is namA [H]

Identifier: 218903186

GI number: 218903186

Start: 1968851

End: 1969888

Strand: Reverse

Name: namA [H]

Synonym: BCAH820_2070

Alternate gene names: 218903186

Gene position: 1969888-1968851 (Counterclockwise)

Preceding gene: 218903193

Following gene: 218903183

Centisome position: 37.15

GC content: 39.5

Gene sequence:

>1038_bases
ATGAATTACAAACTTTTTTCACCTTATACAATTAAAGACGTTACATTAAAAAACCGGATTGTTATGTCACCTATGTGCAT
GTATTCATCAGAAAACGAGGATGGCCAAGTAACGAATTTCCATCTCGTTCATTATGGAACAAGAGCTGCCGGTCAAGTTG
GTTTAGTAATGATTGAAGCAACAGCCGTGTTACCTGGAGGTCGAATTTCAAATAAAGACTTAGGCATTTGGGATGACAGT
CTAATTGAAGGCTTACATAAAACGACAACTTTTATACATGATAACGGGGCAAAAGCTGCCATTCAACTCGCTCATGCTGG
AAGAAAAGCTGAATTAGAAACGGATGCTCTCGCTCCATCCGCAGTTCCGTTTAATGAAACTATGAAAACACCAGTAGAAA
TGAGTAAACACCAAATTAAAGATACTGTATTAGCTTTTCAGCAGGCTGCAATACGATCAAAACAAGCTGGATTTGACGTT
ATTGAAATACATGGCGCCCACGGTTATCTCATTAATGAATTTCTTTCTCCGCTTTCCAATAAGCGGACTGATGAATATGG
CGGTTCACCTGAAAACCGCTATCGTTTCTTACGCGAAATCATTGACTCGATAAATGAGGTTTGGAACGGACCGTTATTTG
TTCGTATTTCAGCAAATGATTATCACCCTGACGGGTTAACGGTTCAAGATTACGTTCAATATACGAAATGGATGAAAGAA
CAAGGAGTAGATTTAATCGATTGTAGCTCTGGGGCTGTTGTACCTGCACGCATCGATGTTTATCCTGGGTATCAAGTACA
ATACGCTAAACATATTAAAGAACATGCTAACATTGCAACTGGTGCCGTTGGATTGATTACGACCGGGGCACAAGCAGAGC
AAATTTTAACTAATAACGAAGCAGATTTAATTTTTATCGGACGTGAGTTACTTCGCAATCCTTACTTCCCAAGAATAGCC
GCCAATGAACTTGGCTTTGAGTTAGAAGAACCGTATCAATACGAGCGAGCGCCTGGGAAAATTAGTACAAATAAATAA

Upstream 100 bases:

>100_bases
TGTAACACGAATAGACAAAATTTTTCGTATAAGCGTTTTATTCGAGAAACAAAAACGAGAATGATACAATGTAAGAAAAT
TCAATCTAGGAGGCTATTGG

Downstream 100 bases:

>100_bases
AACCGAGAAGCTTTTCTTCTCGGTTTTATTTATTCTATCGTTGTAATTTCATTCGAATTATAAATGTGGATACCTGATTC
TTCTCGCAATGCAGTTATAT

Product: NADPH dehydrogenase NamA

Products: NA

Alternate protein names: Xenobiotic reductase [H]

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MNYKLFSPYTIKDVTLKNRIVMSPMCMYSSENEDGQVTNFHLVHYGTRAAGQVGLVMIEATAVLPGGRISNKDLGIWDDS
LIEGLHKTTTFIHDNGAKAAIQLAHAGRKAELETDALAPSAVPFNETMKTPVEMSKHQIKDTVLAFQQAAIRSKQAGFDV
IEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSINEVWNGPLFVRISANDYHPDGLTVQDYVQYTKWMKE
QGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILTNNEADLIFIGRELLRNPYFPRIA
ANELGFELEEPYQYERAPGKISTNK

Sequences:

>Translated_345_residues
MNYKLFSPYTIKDVTLKNRIVMSPMCMYSSENEDGQVTNFHLVHYGTRAAGQVGLVMIEATAVLPGGRISNKDLGIWDDS
LIEGLHKTTTFIHDNGAKAAIQLAHAGRKAELETDALAPSAVPFNETMKTPVEMSKHQIKDTVLAFQQAAIRSKQAGFDV
IEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSINEVWNGPLFVRISANDYHPDGLTVQDYVQYTKWMKE
QGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILTNNEADLIFIGRELLRNPYFPRIA
ANELGFELEEPYQYERAPGKISTNK
>Mature_345_residues
MNYKLFSPYTIKDVTLKNRIVMSPMCMYSSENEDGQVTNFHLVHYGTRAAGQVGLVMIEATAVLPGGRISNKDLGIWDDS
LIEGLHKTTTFIHDNGAKAAIQLAHAGRKAELETDALAPSAVPFNETMKTPVEMSKHQIKDTVLAFQQAAIRSKQAGFDV
IEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSINEVWNGPLFVRISANDYHPDGLTVQDYVQYTKWMKE
QGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILTNNEADLIFIGRELLRNPYFPRIA
ANELGFELEEPYQYERAPGKISTNK

Specific function: Catalyzes the reduction of the double bond of an array of alpha, beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes [H]

COG id: COG1902

COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family. NamA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789463, Length=328, Percent_Identity=30.1829268292683, Blast_Score=118, Evalue=5e-28,
Organism=Escherichia coli, GI1787939, Length=236, Percent_Identity=33.0508474576271, Blast_Score=117, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17559802, Length=261, Percent_Identity=31.0344827586207, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI72001454, Length=251, Percent_Identity=31.4741035856574, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17540738, Length=257, Percent_Identity=30.7392996108949, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17565138, Length=181, Percent_Identity=33.1491712707182, Blast_Score=101, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI17559804, Length=174, Percent_Identity=36.7816091954023, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17564188, Length=174, Percent_Identity=34.4827586206897, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17566914, Length=252, Percent_Identity=31.3492063492063, Blast_Score=97, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6325086, Length=220, Percent_Identity=34.0909090909091, Blast_Score=107, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6321973, Length=217, Percent_Identity=34.5622119815668, Blast_Score=105, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001155 [H]

Pfam domain/function: PF00724 Oxidored_FMN [H]

EC number: =1.6.99.1 [H]

Molecular weight: Translated: 38451; Mature: 38451

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYKLFSPYTIKDVTLKNRIVMSPMCMYSSENEDGQVTNFHLVHYGTRAAGQVGLVMIEA
CCCEECCCEEEEEEEECCEEEECHHEECCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEE
TAVLPGGRISNKDLGIWDDSLIEGLHKTTTFIHDNGAKAAIQLAHAGRKAELETDALAPS
EEECCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCHHHCCCC
AVPFNETMKTPVEMSKHQIKDTVLAFQQAAIRSKQAGFDVIEIHGAHGYLINEFLSPLSN
CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHC
KRTDEYGGSPENRYRFLREIIDSINEVWNGPLFVRISANDYHPDGLTVQDYVQYTKWMKE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH
QGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILTNNE
CCCCEEECCCCCEEEEEEEECCCCCHHHHHHHHHHCCHHCCCEEEEECCCHHHHHHCCCC
ADLIFIGRELLRNPYFPRIAANELGFELEEPYQYERAPGKISTNK
CCEEEECHHHHCCCCCCCEEHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNYKLFSPYTIKDVTLKNRIVMSPMCMYSSENEDGQVTNFHLVHYGTRAAGQVGLVMIEA
CCCEECCCEEEEEEEECCEEEECHHEECCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEE
TAVLPGGRISNKDLGIWDDSLIEGLHKTTTFIHDNGAKAAIQLAHAGRKAELETDALAPS
EEECCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCHHHCCCC
AVPFNETMKTPVEMSKHQIKDTVLAFQQAAIRSKQAGFDVIEIHGAHGYLINEFLSPLSN
CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHC
KRTDEYGGSPENRYRFLREIIDSINEVWNGPLFVRISANDYHPDGLTVQDYVQYTKWMKE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH
QGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILTNNE
CCCCEEECCCCCEEEEEEEECCCCCHHHHHHHHHHCCHHCCCEEEEECCCHHHHHHCCCC
ADLIFIGRELLRNPYFPRIAANELGFELEEPYQYERAPGKISTNK
CCEEEECHHHHCCCCCCCEEHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA