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The map label for this gene is ymfD [H]

Identifier: 218903139

GI number: 218903139

Start: 1929184

End: 1930482

Strand: Direct

Name: ymfD [H]

Synonym: BCAH820_2023

Alternate gene names: 218903139

Gene position: 1929184-1930482 (Clockwise)

Preceding gene: 218903138

Following gene: 218903141

Centisome position: 36.38

GC content: 36.34

Gene sequence:

>1299_bases
ATGAAAAATTACGTTCCAGCAGGGCTATTACATGGTAAGAAATATATGATGAAAGGTTTCGAAGCCAACATGTTAAAAAA
AGAAAACTGTTGTTTAATTGCGCTTGCATCAGTTCCACTTGTTATGACATTAGGGAATTCAATGCTCATTCCAATCCTGC
CGACAATTGAAAAAAAATTACATATTTCATCGTTTCAAGTATCCATGATTATTACAATTTACTCTATCGTAGCCATTCTA
CTTATACCGATTGCTGGTTATTTATCAGATCGATGGGGGAGAAAGATGGTAATGGTTCCGAGTTTGCTGATTGCGGCCAT
AGGAGGAGCGATAACTGGTTGGGTATCTTGGAAAGTTGATAATCCCTACACTTGGATATTGATTGGTAGAGCGATTCAAG
GTATTGGTGCTGCTGGTGCAATGCCAGTTGTTATACCGTGTGTTGGTGATTTATACAAGGATGAAAAACAAGTTAGTACA
GGTTTAGGAATCATAGAAACATCCAATACATTTGGGAAAGTGTTGAGCCCTATTTTAGGATCTGCTCTTGCTGCCATTGT
ATGGTTTTTACCATTTTGGGCGATTCCAGTTTTATGCATAGTATCAATTGTTTTATTACTTGTTCTAGTAAAGGCAAAGA
AACAAGAAGGAGAAGTACCGCCACTTAAAGAGTTTATCAAATCTATTGTCGCTACGTTTCGAGAAAAGGGAAGATGGTTG
ATTGCCATTTTTGCATTAGGTGCAATTATTATGCTTATTTTATTCGGAATTCTCTTTTATTTGTCAACTATATTGGAATC
AAAGTATGACATTCATGGTATATGGAAAGGGTGTGTACTTGCGATTCCGTTACTTGTACTGTCACTTAGTTCATATATGG
CTGGTAAAAAAATTGGAGATAATCAAAATGTGATGAAGAAGTGTATTTATATTGGTTTTTTAATGGCTGCTACATCAGTT
ATCATTCCTTTATTTATAAAAGGGATTTATTTACTACTTCTTTGTCTCGTTATTATGGGGATAGGAATTGGTATGGCACT
CCCATGTTTAGATGCTCTCATTACACAAGGGATTGAAAAGGAGCAAAGGGGAACGGTTACGTCATTTTATAGTTCTATGC
GATTTATCGGTGTAGCAGCTGGACCGCCTCTATACTCTTTTTTCATGAAAGGTACTGACCATGAAGTGTTTTATTTAACA
AGTATTTTCGCTGCTATCGGTGCTGTTATAGCGATCATTTGGATTAAACCAGCAAAAGATGCAAAGAACGTAAAACAGAA
ACCGGAACCTACTTCATAA

Upstream 100 bases:

>100_bases
ATATTGTGAACTGGATTCAAAGAATAGGAATAATACTATGTTTTCCCCAATTTCTTTTGTTGTGAATGGGAAGTAGTAAA
GATGTAATAGCCCTGGTGGA

Downstream 100 bases:

>100_bases
TTTGAAAGAGAATTGCATGATGTTTTCAGTAACATGCAATTCTCTTTCGTTCACTAAGAATAAATAACTTGTTTTAACAT
ATAAAGTGCAACACCCCATA

Product: putative multidrug resistance protein

Products: Proton [Cytoplasm]; drug [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MKNYVPAGLLHGKKYMMKGFEANMLKKENCCLIALASVPLVMTLGNSMLIPILPTIEKKLHISSFQVSMIITIYSIVAIL
LIPIAGYLSDRWGRKMVMVPSLLIAAIGGAITGWVSWKVDNPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDEKQVST
GLGIIETSNTFGKVLSPILGSALAAIVWFLPFWAIPVLCIVSIVLLLVLVKAKKQEGEVPPLKEFIKSIVATFREKGRWL
IAIFALGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGDNQNVMKKCIYIGFLMAATSV
IIPLFIKGIYLLLLCLVIMGIGIGMALPCLDALITQGIEKEQRGTVTSFYSSMRFIGVAAGPPLYSFFMKGTDHEVFYLT
SIFAAIGAVIAIIWIKPAKDAKNVKQKPEPTS

Sequences:

>Translated_432_residues
MKNYVPAGLLHGKKYMMKGFEANMLKKENCCLIALASVPLVMTLGNSMLIPILPTIEKKLHISSFQVSMIITIYSIVAIL
LIPIAGYLSDRWGRKMVMVPSLLIAAIGGAITGWVSWKVDNPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDEKQVST
GLGIIETSNTFGKVLSPILGSALAAIVWFLPFWAIPVLCIVSIVLLLVLVKAKKQEGEVPPLKEFIKSIVATFREKGRWL
IAIFALGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGDNQNVMKKCIYIGFLMAATSV
IIPLFIKGIYLLLLCLVIMGIGIGMALPCLDALITQGIEKEQRGTVTSFYSSMRFIGVAAGPPLYSFFMKGTDHEVFYLT
SIFAAIGAVIAIIWIKPAKDAKNVKQKPEPTS
>Mature_432_residues
MKNYVPAGLLHGKKYMMKGFEANMLKKENCCLIALASVPLVMTLGNSMLIPILPTIEKKLHISSFQVSMIITIYSIVAIL
LIPIAGYLSDRWGRKMVMVPSLLIAAIGGAITGWVSWKVDNPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDEKQVST
GLGIIETSNTFGKVLSPILGSALAAIVWFLPFWAIPVLCIVSIVLLLVLVKAKKQEGEVPPLKEFIKSIVATFREKGRWL
IAIFALGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGDNQNVMKKCIYIGFLMAATSV
IIPLFIKGIYLLLLCLVIMGIGIGMALPCLDALITQGIEKEQRGTVTSFYSSMRFIGVAAGPPLYSFFMKGTDHEVFYLT
SIFAAIGAVIAIIWIKPAKDAKNVKQKPEPTS

Specific function: Involved in secretion of bacillibactin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001958 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47078; Mature: 47078

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNYVPAGLLHGKKYMMKGFEANMLKKENCCLIALASVPLVMTLGNSMLIPILPTIEKKL
CCCCCCHHHHHHHHHHHCCCHHCCCCCCCCEEEEHHHHCHHHHCCCCEEEECHHHHHHHH
HISSFQVSMIITIYSIVAILLIPIAGYLSDRWGRKMVMVPSLLIAAIGGAITGWVSWKVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHEEEEEEC
NPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDEKQVSTGLGIIETSNTFGKVLSPILG
CCEEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHH
SALAAIVWFLPFWAIPVLCIVSIVLLLVLVKAKKQEGEVPPLKEFIKSIVATFREKGRWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEE
IAIFALGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NQNVMKKCIYIGFLMAATSVIIPLFIKGIYLLLLCLVIMGIGIGMALPCLDALITQGIEK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EQRGTVTSFYSSMRFIGVAAGPPLYSFFMKGTDHEVFYLTSIFAAIGAVIAIIWIKPAKD
HHCCHHHHHHHHHHHEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
AKNVKQKPEPTS
HHHHCCCCCCCC
>Mature Secondary Structure
MKNYVPAGLLHGKKYMMKGFEANMLKKENCCLIALASVPLVMTLGNSMLIPILPTIEKKL
CCCCCCHHHHHHHHHHHCCCHHCCCCCCCCEEEEHHHHCHHHHCCCCEEEECHHHHHHHH
HISSFQVSMIITIYSIVAILLIPIAGYLSDRWGRKMVMVPSLLIAAIGGAITGWVSWKVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHEEEEEEC
NPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDEKQVSTGLGIIETSNTFGKVLSPILG
CCEEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHH
SALAAIVWFLPFWAIPVLCIVSIVLLLVLVKAKKQEGEVPPLKEFIKSIVATFREKGRWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEE
IAIFALGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NQNVMKKCIYIGFLMAATSVIIPLFIKGIYLLLLCLVIMGIGIGMALPCLDALITQGIEK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EQRGTVTSFYSSMRFIGVAAGPPLYSFFMKGTDHEVFYLTSIFAAIGAVIAIIWIKPAKD
HHCCHHHHHHHHHHHEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
AKNVKQKPEPTS
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]