| Definition | Bacillus cereus AH820, complete genome. |
|---|---|
| Accession | NC_011773 |
| Length | 5,302,683 |
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The map label for this gene is ygfF [C]
Identifier: 218903003
GI number: 218903003
Start: 1785557
End: 1786315
Strand: Reverse
Name: ygfF [C]
Synonym: BCAH820_1886
Alternate gene names: 218903003
Gene position: 1786315-1785557 (Counterclockwise)
Preceding gene: 218903010
Following gene: 218903002
Centisome position: 33.69
GC content: 38.34
Gene sequence:
>759_bases ATGTTAAAAGGAAAAGTAGCATTAGTTACAGGAGCAAGCCGAGGAATTGGACGTGCTATTGCAAAACGTTTAGCAAACGA CGGTGCATTAGTTGCTATTCATTATGGTAATCGAAAAGAAGAGGCTGAAGAAACCGTTTATGAAATCCAGTCAAATGGCG GATCAGCTTTTTCCATCGGTGCAAACCTTGAATCTTTACATGGTGTAGAAGCTCTTTATAGTTCTTTAGATAACGAATTA CAAAAAAGAAACGGTGGTACTAAGTTTGATATTTTAATAAACAACGCTGGAATTGGTCCTGGTGCTTTTATTGAAGAAAC GACTGAACAATTTTTTGATAGAATGGTTTCAGTAAATGCAAAAGCACCATTCTTTATCATCCAACAAGCTCTATCTCGTT TACGTGACAATAGCCGAATTATTAATATTTCATCCGCTGCCACTCGTATTTCTTTACCTGATTTCATTGCATATAGTATG ACGAAAGGCGCTATTAATACAATGACTTTCACACTAGCAAAACAGCTCGGAGCAAGAGGAATAACGGTGAATGCAATACT TCCAGGATTTATTAAAACAGATATGAATGCAGAACTCTTGAGTGACCCAATGATGAAACAATACGCCACTACTATTTCCG CTTTCAATCGCTTAGGTGAAGTAGAAGACATTGCCGATACCGCGGCATTTCTCGCTTCACCAGACAGCCGCTGGGTTACT GGACAATTAATTGATGTTAGCGGAGGATCTTGTTTATAA
Upstream 100 bases:
>100_bases CTTCTTACACATACTCATATATTACTTAAGTATGTCCGCATTACTACATAAAGAAAAATAACTTAAAAACAATTAAAATT TATGAGGAGATGAGAAAACT
Downstream 100 bases:
>100_bases AAAAGCATATATTTTCAAATCTTTTTTATTGCGCAATAAAACAATTTATATAATACTATATAAAACATATATTTAGGAGG ATTACAGCAATGTCCGAAAA
Product: short chain dehydrogenase
Products: NA
Alternate protein names: ORFC [H]
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL QKRNGGTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSM TKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVT GQLIDVSGGSCL
Sequences:
>Translated_252_residues MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL QKRNGGTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSM TKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVT GQLIDVSGGSCL >Mature_252_residues MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL QKRNGGTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSM TKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVT GQLIDVSGGSCL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=252, Percent_Identity=33.3333333333333, Blast_Score=124, Evalue=6e-29, Organism=Homo sapiens, GI5031737, Length=254, Percent_Identity=33.4645669291339, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI15277342, Length=258, Percent_Identity=32.9457364341085, Blast_Score=119, Evalue=2e-27, Organism=Homo sapiens, GI126723750, Length=255, Percent_Identity=31.3725490196078, Blast_Score=100, Evalue=9e-22, Organism=Homo sapiens, GI33667109, Length=200, Percent_Identity=34, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI7705925, Length=254, Percent_Identity=29.1338582677165, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI209862901, Length=227, Percent_Identity=26.8722466960352, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI19923983, Length=227, Percent_Identity=26.8722466960352, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI40254992, Length=247, Percent_Identity=26.7206477732794, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI126723191, Length=189, Percent_Identity=31.2169312169312, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI19923817, Length=265, Percent_Identity=26.4150943396226, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI59889578, Length=184, Percent_Identity=32.6086956521739, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI109715829, Length=242, Percent_Identity=28.9256198347107, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI10190746, Length=272, Percent_Identity=27.9411764705882, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI2367175, Length=251, Percent_Identity=33.8645418326693, Blast_Score=135, Evalue=3e-33, Organism=Escherichia coli, GI2367365, Length=246, Percent_Identity=30.8943089430894, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI1787335, Length=254, Percent_Identity=35.0393700787402, Blast_Score=110, Evalue=8e-26, Organism=Escherichia coli, GI1790717, Length=251, Percent_Identity=29.8804780876494, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1787905, Length=251, Percent_Identity=34.6613545816733, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI87082160, Length=262, Percent_Identity=32.4427480916031, Blast_Score=98, Evalue=4e-22, Organism=Escherichia coli, GI1789378, Length=253, Percent_Identity=32.0158102766798, Blast_Score=97, Evalue=7e-22, Organism=Escherichia coli, GI87082100, Length=263, Percent_Identity=31.1787072243346, Blast_Score=97, Evalue=7e-22, Organism=Escherichia coli, GI1788459, Length=252, Percent_Identity=31.3492063492063, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1789208, Length=254, Percent_Identity=30.7086614173228, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1789057, Length=264, Percent_Identity=29.5454545454545, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787545, Length=255, Percent_Identity=23.1372549019608, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786812, Length=261, Percent_Identity=26.0536398467433, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17561402, Length=263, Percent_Identity=35.7414448669202, Blast_Score=117, Evalue=5e-27, Organism=Caenorhabditis elegans, GI17560676, Length=253, Percent_Identity=32.0158102766798, Blast_Score=112, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17555706, Length=253, Percent_Identity=32.4110671936759, Blast_Score=106, Evalue=9e-24, Organism=Caenorhabditis elegans, GI25147288, Length=254, Percent_Identity=31.8897637795276, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17562910, Length=262, Percent_Identity=33.206106870229, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI115534694, Length=250, Percent_Identity=31.6, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17562906, Length=267, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17559104, Length=265, Percent_Identity=32.4528301886792, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI71994604, Length=249, Percent_Identity=29.3172690763052, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17531453, Length=275, Percent_Identity=33.0909090909091, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17562908, Length=267, Percent_Identity=32.9588014981273, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI193204405, Length=267, Percent_Identity=33.3333333333333, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17560220, Length=266, Percent_Identity=31.9548872180451, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17536025, Length=258, Percent_Identity=29.8449612403101, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=28.1124497991968, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17536651, Length=258, Percent_Identity=28.2945736434109, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17562904, Length=265, Percent_Identity=30.5660377358491, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71982365, Length=210, Percent_Identity=31.9047619047619, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17555612, Length=220, Percent_Identity=30.4545454545455, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17538486, Length=267, Percent_Identity=32.2097378277154, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17544670, Length=265, Percent_Identity=28.3018867924528, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI72000259, Length=265, Percent_Identity=29.0566037735849, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17560332, Length=269, Percent_Identity=31.2267657992565, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17561272, Length=258, Percent_Identity=30.6201550387597, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17508895, Length=199, Percent_Identity=30.6532663316583, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17565030, Length=265, Percent_Identity=30.5660377358491, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17564282, Length=200, Percent_Identity=28.5, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17560150, Length=261, Percent_Identity=28.735632183908, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17558628, Length=253, Percent_Identity=30.4347826086957, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI72001658, Length=213, Percent_Identity=28.169014084507, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17563726, Length=266, Percent_Identity=29.3233082706767, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17551412, Length=266, Percent_Identity=29.6992481203008, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17508651, Length=254, Percent_Identity=28.3464566929134, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17562990, Length=261, Percent_Identity=28.735632183908, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17538480, Length=274, Percent_Identity=28.4671532846715, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI86565303, Length=214, Percent_Identity=28.0373831775701, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193203115, Length=248, Percent_Identity=24.5967741935484, Blast_Score=64, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71997099, Length=213, Percent_Identity=29.1079812206573, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=255, Percent_Identity=25.8823529411765, Blast_Score=66, Evalue=5e-12, Organism=Drosophila melanogaster, GI24643142, Length=251, Percent_Identity=37.4501992031873, Blast_Score=133, Evalue=1e-31, Organism=Drosophila melanogaster, GI24639444, Length=253, Percent_Identity=35.1778656126482, Blast_Score=125, Evalue=3e-29, Organism=Drosophila melanogaster, GI21355319, Length=258, Percent_Identity=34.4961240310078, Blast_Score=115, Evalue=3e-26, Organism=Drosophila melanogaster, GI28571526, Length=261, Percent_Identity=31.8007662835249, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI21357041, Length=254, Percent_Identity=32.6771653543307, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI24644339, Length=254, Percent_Identity=32.6771653543307, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI23397609, Length=261, Percent_Identity=29.5019157088123, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24644337, Length=258, Percent_Identity=30.2325581395349, Blast_Score=94, Evalue=8e-20, Organism=Drosophila melanogaster, GI21357673, Length=253, Percent_Identity=26.8774703557312, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24640492, Length=200, Percent_Identity=28.5, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI22024069, Length=208, Percent_Identity=31.25, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24584748, Length=201, Percent_Identity=27.363184079602, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI161076933, Length=201, Percent_Identity=27.363184079602, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI28573296, Length=208, Percent_Identity=30.7692307692308, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI45554248, Length=222, Percent_Identity=31.981981981982, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24640117, Length=222, Percent_Identity=31.981981981982, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI19921754, Length=221, Percent_Identity=29.8642533936652, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 27017; Mature: 27017
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIG CCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEC ANLESLHGVEALYSSLDNELQKRNGGTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNA CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC KAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARG CCCHHHHHHHHHHHCCCCEEEEEECCHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCC ITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVT EEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEE GQLIDVSGGSCL EEEEECCCCCCC >Mature Secondary Structure MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIG CCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEC ANLESLHGVEALYSSLDNELQKRNGGTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNA CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC KAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARG CCCHHHHHHHHHHHCCCCEEEEEECCHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCC ITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVT EEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEE GQLIDVSGGSCL EEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8868443 [H]