BacMap

Definition	Bacillus cereus AH820, complete genome.
Accession	NC_011773
Length	5,302,683

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The map label for this gene is ybbO [C]

Identifier: 218902935

GI number: 218902935

Start: 1713097

End: 1713807

Strand: Reverse

Name: ybbO [C]

Synonym: BCAH820_1818

Alternate gene names: 218902935

Gene position: 1713807-1713097 (Counterclockwise)

Preceding gene: 218902937

Following gene: 218902934

Centisome position: 32.32

GC content: 32.21

Gene sequence:

>711_bases
ATGAAAAAATATGCTTTTATAACAGGTGCGAATAAAGGAATTGGATATGAACTTGTTCGTCAATTAGCAGAAAAAGATTA
TCACGTATTTTTAGGTGCTCGTAATGAACAACTTGGACAACAAGCCGTAGAATCTTTAAATGTTTCAAACGTTTCCTATA
TTCAAGTAGATATTTCAAGTTCACAATCCATTCAAGAAGCAACAAAGAAAATTTACGAAACGACTGACCACTTACATTTA
TTAATTAATAACGCAGGCATAGCACTCGACTTCAATACGCTACCTAGCGAATTAAATATTGAAACTTTACGTCAAGGATT
TGAAGTTAACTTTTTTGGAACATTCCAAATGGTGCAAGCCTTTTTGCCATTATTAAAGAAATCAAGCAACAGTAAAATAA
TAAATGTAACAACTGACATGGCCTCACTAACAATGTTTGCTAATGGTGAAACACATCCAATTAATACACTAGGATATAAT
TCTTCCAAAACAGCTATTAATGCTTTAACATTAGCTTTTAGTAAAGAATTTGCTACTAACGGTCCAGAAGTATTTGGGGT
AACTCCTGGTTTTACAACTACGGATCTTAATGGAAATTCCCCCGGTGGCCATACAACTACTGAAAGTGCTAAAATTATTA
GTAAATATGCATTAAGTAAAACAAACTATAATGGTAAAATACTTAATAAAGATGGCATTATACCTTGGTAA

Upstream 100 bases:

>100_bases
ATTATATATTTATTTAAAAAAATTCCTCTTGACCTAAACTTAAGTTTAGGCTGTATCCTTTCCTTTGTAACCTACTATAA
CACTACTGGAGGAATTCAAT

Downstream 100 bases:

>100_bases
TAAAAGGATGAATGATATGTATTATACAATTGGGCAAGTCGCCAAAATGCAACACTTAACAATTTCTCAAATACGTTATT
ACGATAAACAAGGACTATTC

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MKKYAFITGANKGIGYELVRQLAEKDYHVFLGARNEQLGQQAVESLNVSNVSYIQVDISSSQSIQEATKKIYETTDHLHL
LINNAGIALDFNTLPSELNIETLRQGFEVNFFGTFQMVQAFLPLLKKSSNSKIINVTTDMASLTMFANGETHPINTLGYN
SSKTAINALTLAFSKEFATNGPEVFGVTPGFTTTDLNGNSPGGHTTTESAKIISKYALSKTNYNGKILNKDGIIPW

Sequences:

>Translated_236_residues
MKKYAFITGANKGIGYELVRQLAEKDYHVFLGARNEQLGQQAVESLNVSNVSYIQVDISSSQSIQEATKKIYETTDHLHL
LINNAGIALDFNTLPSELNIETLRQGFEVNFFGTFQMVQAFLPLLKKSSNSKIINVTTDMASLTMFANGETHPINTLGYN
SSKTAINALTLAFSKEFATNGPEVFGVTPGFTTTDLNGNSPGGHTTTESAKIISKYALSKTNYNGKILNKDGIIPW
>Mature_236_residues
MKKYAFITGANKGIGYELVRQLAEKDYHVFLGARNEQLGQQAVESLNVSNVSYIQVDISSSQSIQEATKKIYETTDHLHL
LINNAGIALDFNTLPSELNIETLRQGFEVNFFGTFQMVQAFLPLLKKSSNSKIINVTTDMASLTMFANGETHPINTLGYN
SSKTAINALTLAFSKEFATNGPEVFGVTPGFTTTDLNGNSPGGHTTTESAKIISKYALSKTNYNGKILNKDGIIPW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI4504503, Length=203, Percent_Identity=31.0344827586207, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI150247226, Length=198, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI19743808, Length=196, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI166795268, Length=206, Percent_Identity=29.126213592233, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI7706318, Length=209, Percent_Identity=25.3588516746411, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI7705421, Length=264, Percent_Identity=29.1666666666667, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI225579078, Length=219, Percent_Identity=31.5068493150685, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI44680136, Length=206, Percent_Identity=26.6990291262136, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI44680133, Length=206, Percent_Identity=26.6990291262136, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI17738292, Length=206, Percent_Identity=26.6990291262136, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI186928839, Length=213, Percent_Identity=27.2300469483568, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI4502599, Length=140, Percent_Identity=35, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI4502601, Length=150, Percent_Identity=30.6666666666667, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI40548397, Length=197, Percent_Identity=26.3959390862944, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI214010158, Length=197, Percent_Identity=26.3959390862944, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI214010156, Length=197, Percent_Identity=26.3959390862944, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI22758144, Length=197, Percent_Identity=26.3959390862944, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI193804850, Length=213, Percent_Identity=27.2300469483568, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1786701, Length=200, Percent_Identity=27.5, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787335, Length=194, Percent_Identity=26.2886597938144, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1786812, Length=197, Percent_Identity=27.4111675126904, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87082160, Length=206, Percent_Identity=26.2135922330097, Blast_Score=67, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17558006, Length=238, Percent_Identity=30.2521008403361, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17558990, Length=244, Percent_Identity=26.2295081967213, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17559962, Length=210, Percent_Identity=29.5238095238095, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17542178, Length=228, Percent_Identity=32.4561403508772, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17541382, Length=252, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17559964, Length=210, Percent_Identity=29.0476190476191, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI193207563, Length=239, Percent_Identity=26.3598326359833, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17532177, Length=237, Percent_Identity=28.2700421940928, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI72001658, Length=227, Percent_Identity=29.0748898678414, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17505416, Length=230, Percent_Identity=30.4347826086957, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17558994, Length=244, Percent_Identity=23.7704918032787, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17558996, Length=253, Percent_Identity=25.6916996047431, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17532791, Length=138, Percent_Identity=30.4347826086957, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17558992, Length=236, Percent_Identity=27.5423728813559, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17561402, Length=198, Percent_Identity=26.7676767676768, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71994604, Length=215, Percent_Identity=30.6976744186047, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6322227, Length=204, Percent_Identity=26.9607843137255, Blast_Score=69, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6323882, Length=203, Percent_Identity=25.615763546798, Blast_Score=67, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6322067, Length=208, Percent_Identity=29.8076923076923, Blast_Score=66, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24640547, Length=250, Percent_Identity=26.4, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24586328, Length=140, Percent_Identity=35, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24639444, Length=206, Percent_Identity=29.126213592233, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI28573296, Length=207, Percent_Identity=28.0193236714976, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45553409, Length=184, Percent_Identity=28.2608695652174, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24647948, Length=184, Percent_Identity=28.2608695652174, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI19921754, Length=205, Percent_Identity=29.2682926829268, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24643142, Length=198, Percent_Identity=30.8080808080808, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24647946, Length=184, Percent_Identity=28.2608695652174, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI20129347, Length=212, Percent_Identity=25, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24656154, Length=232, Percent_Identity=29.7413793103448, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI19922628, Length=232, Percent_Identity=29.7413793103448, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI161076371, Length=241, Percent_Identity=27.8008298755187, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21358495, Length=207, Percent_Identity=24.1545893719807, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI21356301, Length=207, Percent_Identity=25.1207729468599, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI22024069, Length=209, Percent_Identity=28.7081339712919, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI45554248, Length=218, Percent_Identity=29.3577981651376, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24640117, Length=218, Percent_Identity=29.3577981651376, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 25826; Mature: 25826

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYAFITGANKGIGYELVRQLAEKDYHVFLGARNEQLGQQAVESLNVSNVSYIQVDISS
CCEEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEEEECCC
SQSIQEATKKIYETTDHLHLLINNAGIALDFNTLPSELNIETLRQGFEVNFFGTFQMVQA
CHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCCCCCCHHHHHCCCEEEEEHHHHHHHH
FLPLLKKSSNSKIINVTTDMASLTMFANGETHPINTLGYNSSKTAINALTLAFSKEFATN
HHHHHHCCCCCEEEEEEECCEEEEEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCC
GPEVFGVTPGFTTTDLNGNSPGGHTTTESAKIISKYALSKTNYNGKILNKDGIIPW
CCEEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCC
>Mature Secondary Structure
MKKYAFITGANKGIGYELVRQLAEKDYHVFLGARNEQLGQQAVESLNVSNVSYIQVDISS
CCEEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEEEECCC
SQSIQEATKKIYETTDHLHLLINNAGIALDFNTLPSELNIETLRQGFEVNFFGTFQMVQA
CHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCCCCCCHHHHHCCCEEEEEHHHHHHHH
FLPLLKKSSNSKIINVTTDMASLTMFANGETHPINTLGYNSSKTAINALTLAFSKEFATN
HHHHHHCCCCCEEEEEEECCEEEEEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCC
GPEVFGVTPGFTTTDLNGNSPGGHTTTESAKIISKYALSKTNYNGKILNKDGIIPW
CCEEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12950922 [H]