Click here to switch to the map view.

The map label for this gene is fliY [H]

Identifier: 218902846

GI number: 218902846

Start: 1638753

End: 1640393

Strand: Direct

Name: fliY [H]

Synonym: BCAH820_1729

Alternate gene names: 218902846

Gene position: 1638753-1640393 (Clockwise)

Preceding gene: 218902845

Following gene: 218902847

Centisome position: 30.9

GC content: 35.89

Gene sequence:

>1641_bases
ATGCCTGAGCAACACACAAAAGGGGATACGAGCACAATTGTGCTAGAAAAAGAAAATGAGCATTTAACGCCTCAAGAATG
CGATATTCTTGGCGAAATTGCAAATATATCATTTGGTTCAGCTTCGACTGTATTATCAACAATCTTAAATAGGCAAGTAA
GCATTACTGCTCCTCGCATCGAATTGGTAGATTTATATGATTCAAGCGACGTCGAAGTTCCACACGTTGTACTAAATATT
CATTTTACAAAAGGATTAGATATGGAAAACCTTCTTGTCCTTAAGCAAGATGTTGCATTATCCATTGCTGATTTAATGAT
GATGGGAACAGGTGAAGTGGAGGACGGAAAAGAACTTGGTGAATTAGAGCTAAGTGCTGTACAAGAAGCGATGAATCAAA
TGATGGGGTTCGCAGCTACATCTATGTCTGAATTCTTCCAAGATACAGTAGATATGTCTCCGCCGACAATTAAAGTTGTA
AAGCTATCAGAAGAAATGGAGAAAATCTCGGAAATCGATGGGAATCAAACGATTGTTAAAGTATCGTTTGATTTAAAAAT
AGATAATCTTGTAAACTCTAAACTTGTGCAAATTGTTTCAGTTGAACATGCGAAACAAATGATAAATAAATTAATGCAAT
TATCTGGTGAAGTAGAAGAGCAAGACGAGCCAGCAGAAGTAGTGGAAACTGAGATTGTAGAAGAACAAGTTGAAAAAGAG
CATTTAACGCAAGAAGAGAAAGATGTCCTTGGTGAAATTGCAAATATTTCAATTGGTTCCGCTTCAACAGTATTGTCAAC
GCTTTTAAATCAGCCAGTTTCAATTAGTACACCGAATGTAGAAGCAATCAATGTTCGCCATTATGATGGAGTACCAGTCC
CGTTTGTTATTTTAAATGTTGATTTTGTTGAAGGACTAAAGAATGAGAATGTATTCGTATTTACGAAAGATGTCGCTTTA
ACAATGGTAGATTTAATGATGATGGGGACAGGGGAAGTTGATCCAGAGAAAGAACTTAGTGAATTAGAACTGAGCGGTAT
TAAAGAAATCATGAACCAAATGATGGGGCATGCTGCAACGGCGATGTCAGAAATGTTTCAAGAAAAAATGGACATGACAC
CACCAAATGTTAAATTTGTAACTTTAAAAGAAGAAATGGAATATTTGGGAGAGTCAATGGAAGTGGACGAACTCGTTCAA
ATTACGTTCAACCTTGAAATTGGCGACCTGCTTCAATCAAAAATGTATCAAATTTTACCGATTTCAGAAGCGAAAGAAAT
GGTAAGAAGACTTCTATATCCAATGGTGGAAGAAGAAGAGATTGTTACGGAAGAAATTGAAGAAGAAAAAGTTGTAGAAC
CTGTTGTGCAACCTATTGAATTTAAAGAAGTAAAACAAATGGAACCAGTATACATGGACACATCCATCCTACAAAATGTA
GAAATGAACGTGAAATTTGTATTTGGAAGCACAGTGAAAACCATTCAAGATATTTTAAGTTTACAAGAGAATGAAGCGGT
TGTGCTAGATGAAGATATTGACGAGCCAATTCGTATTTATGTAAATGATGTATTGGTGGCGTATGGTGAACTTGTAAATG
TAGATGGATTTTTCGGAGTAAAAGTGACGAAATCGCTATAA

Upstream 100 bases:

>100_bases
GGGAATAAATACATATTAACGTTTTATATAATAAGTTTGTTAAAATAAAATGAGAGTTTATATCATTTGATAGAAAAACA
GAAATGAGGAGGCAGAGAAA

Downstream 100 bases:

>100_bases
GTCGTTGAAATAGGAGTTTGAGCTAGTAGATGAAAAACGTAAAGTTTTTTCTAATGAGCTGGTTATGCATACATGTGTGC
TTGCTCTTCCCGCTGCAAAG

Product: flagellar motor switch protein

Products: NA

Alternate protein names: CheY-P phosphatase FliY [H]

Number of amino acids: Translated: 546; Mature: 545

Protein sequence:

>546_residues
MPEQHTKGDTSTIVLEKENEHLTPQECDILGEIANISFGSASTVLSTILNRQVSITAPRIELVDLYDSSDVEVPHVVLNI
HFTKGLDMENLLVLKQDVALSIADLMMMGTGEVEDGKELGELELSAVQEAMNQMMGFAATSMSEFFQDTVDMSPPTIKVV
KLSEEMEKISEIDGNQTIVKVSFDLKIDNLVNSKLVQIVSVEHAKQMINKLMQLSGEVEEQDEPAEVVETEIVEEQVEKE
HLTQEEKDVLGEIANISIGSASTVLSTLLNQPVSISTPNVEAINVRHYDGVPVPFVILNVDFVEGLKNENVFVFTKDVAL
TMVDLMMMGTGEVDPEKELSELELSGIKEIMNQMMGHAATAMSEMFQEKMDMTPPNVKFVTLKEEMEYLGESMEVDELVQ
ITFNLEIGDLLQSKMYQILPISEAKEMVRRLLYPMVEEEEIVTEEIEEEKVVEPVVQPIEFKEVKQMEPVYMDTSILQNV
EMNVKFVFGSTVKTIQDILSLQENEAVVLDEDIDEPIRIYVNDVLVAYGELVNVDGFFGVKVTKSL

Sequences:

>Translated_546_residues
MPEQHTKGDTSTIVLEKENEHLTPQECDILGEIANISFGSASTVLSTILNRQVSITAPRIELVDLYDSSDVEVPHVVLNI
HFTKGLDMENLLVLKQDVALSIADLMMMGTGEVEDGKELGELELSAVQEAMNQMMGFAATSMSEFFQDTVDMSPPTIKVV
KLSEEMEKISEIDGNQTIVKVSFDLKIDNLVNSKLVQIVSVEHAKQMINKLMQLSGEVEEQDEPAEVVETEIVEEQVEKE
HLTQEEKDVLGEIANISIGSASTVLSTLLNQPVSISTPNVEAINVRHYDGVPVPFVILNVDFVEGLKNENVFVFTKDVAL
TMVDLMMMGTGEVDPEKELSELELSGIKEIMNQMMGHAATAMSEMFQEKMDMTPPNVKFVTLKEEMEYLGESMEVDELVQ
ITFNLEIGDLLQSKMYQILPISEAKEMVRRLLYPMVEEEEIVTEEIEEEKVVEPVVQPIEFKEVKQMEPVYMDTSILQNV
EMNVKFVFGSTVKTIQDILSLQENEAVVLDEDIDEPIRIYVNDVLVAYGELVNVDGFFGVKVTKSL
>Mature_545_residues
PEQHTKGDTSTIVLEKENEHLTPQECDILGEIANISFGSASTVLSTILNRQVSITAPRIELVDLYDSSDVEVPHVVLNIH
FTKGLDMENLLVLKQDVALSIADLMMMGTGEVEDGKELGELELSAVQEAMNQMMGFAATSMSEFFQDTVDMSPPTIKVVK
LSEEMEKISEIDGNQTIVKVSFDLKIDNLVNSKLVQIVSVEHAKQMINKLMQLSGEVEEQDEPAEVVETEIVEEQVEKEH
LTQEEKDVLGEIANISIGSASTVLSTLLNQPVSISTPNVEAINVRHYDGVPVPFVILNVDFVEGLKNENVFVFTKDVALT
MVDLMMMGTGEVDPEKELSELELSGIKEIMNQMMGHAATAMSEMFQEKMDMTPPNVKFVTLKEEMEYLGESMEVDELVQI
TFNLEIGDLLQSKMYQILPISEAKEMVRRLLYPMVEEEEIVTEEIEEEKVVEPVVQPIEFKEVKQMEPVYMDTSILQNVE
MNVKFVFGSTVKTIQDILSLQENEAVVLDEDIDEPIRIYVNDVLVAYGELVNVDGFFGVKVTKSL

Specific function: Component of the flagellar switch. Binds CheY-P and increases its hydrolysis rate in vitro. May function constitutively to remove CheY-P around the flagellar switch to maintain an optimal level of CheY-P whereas CheC may function after addition of an attr

COG id: COG1776

COG function: function code NT; Chemotaxis protein CheC, inhibitor of MCP methylation

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Note=The switch is localized at the base of the flagellar motor, in or near the C-ring, attached to the MS-ring (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliN/MopA/SpaO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007597
- InterPro:   IPR012826
- InterPro:   IPR001172
- InterPro:   IPR001543 [H]

Pfam domain/function: PF04509 CheC; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 61116; Mature: 60985

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEQHTKGDTSTIVLEKENEHLTPQECDILGEIANISFGSASTVLSTILNRQVSITAPRI
CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCE
ELVDLYDSSDVEVPHVVLNIHFTKGLDMENLLVLKQDVALSIADLMMMGTGEVEDGKELG
EEEEECCCCCCCCCEEEEEEEEECCCCHHHHEEEHHHHHHHHHHHHHHCCCCCCCCHHHH
ELELSAVQEAMNQMMGFAATSMSEFFQDTVDMSPPTIKVVKLSEEMEKISEIDGNQTIVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCCEEEE
VSFDLKIDNLVNSKLVQIVSVEHAKQMINKLMQLSGEVEEQDEPAEVVETEIVEEQVEKE
EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
HLTQEEKDVLGEIANISIGSASTVLSTLLNQPVSISTPNVEAINVRHYDGVPVPFVILNV
HCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEECCCCEEEEEEEECCCCCCCEEEEEE
DFVEGLKNENVFVFTKDVALTMVDLMMMGTGEVDPEKELSELELSGIKEIMNQMMGHAAT
HHHHCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AMSEMFQEKMDMTPPNVKFVTLKEEMEYLGESMEVDELVQITFNLEIGDLLQSKMYQILP
HHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCC
ISEAKEMVRRLLYPMVEEEEIVTEEIEEEKVVEPVVQPIEFKEVKQMEPVYMDTSILQNV
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEECHHHHHCC
EMNVKFVFGSTVKTIQDILSLQENEAVVLDEDIDEPIRIYVNDVLVAYGELVNVDGFFGV
CCEEEEEECCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
KVTKSL
EEECCC
>Mature Secondary Structure 
PEQHTKGDTSTIVLEKENEHLTPQECDILGEIANISFGSASTVLSTILNRQVSITAPRI
CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCE
ELVDLYDSSDVEVPHVVLNIHFTKGLDMENLLVLKQDVALSIADLMMMGTGEVEDGKELG
EEEEECCCCCCCCCEEEEEEEEECCCCHHHHEEEHHHHHHHHHHHHHHCCCCCCCCHHHH
ELELSAVQEAMNQMMGFAATSMSEFFQDTVDMSPPTIKVVKLSEEMEKISEIDGNQTIVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCCEEEE
VSFDLKIDNLVNSKLVQIVSVEHAKQMINKLMQLSGEVEEQDEPAEVVETEIVEEQVEKE
EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
HLTQEEKDVLGEIANISIGSASTVLSTLLNQPVSISTPNVEAINVRHYDGVPVPFVILNV
HCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEECCCCEEEEEEEECCCCCCCEEEEEE
DFVEGLKNENVFVFTKDVALTMVDLMMMGTGEVDPEKELSELELSGIKEIMNQMMGHAAT
HHHHCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AMSEMFQEKMDMTPPNVKFVTLKEEMEYLGESMEVDELVQITFNLEIGDLLQSKMYQILP
HHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCC
ISEAKEMVRRLLYPMVEEEEIVTEEIEEEKVVEPVVQPIEFKEVKQMEPVYMDTSILQNV
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEECHHHHHCC
EMNVKFVFGSTVKTIQDILSLQENEAVVLDEDIDEPIRIYVNDVLVAYGELVNVDGFFGV
CCEEEEEECCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
KVTKSL
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1447979; 9384377; 1898932 [H]