Click here to switch to the map view.

The map label for this gene is ypvA [H]

Identifier: 218902773

GI number: 218902773

Start: 1558768

End: 1560705

Strand: Direct

Name: ypvA [H]

Synonym: BCAH820_1656

Alternate gene names: 218902773

Gene position: 1558768-1560705 (Clockwise)

Preceding gene: 218902772

Following gene: 218902774

Centisome position: 29.4

GC content: 36.69

Gene sequence:

>1938_bases
ATGTTTACTGAGAAGAGATTACCATTTGAAGTAGGAAAACAAGACAATTTTTATGATAAGTTGAATGAGTGGATTGGAGA
TGTGTTTTACGACATCCTTCCGGAAAAAGGCTTTGAAGAGCGTGATGAACAAATTTTTATGGCGTTTCAATTAGAGCGTG
CTTTCCAAGAAAAGAAAGTTATGTTCGCAGAAGCGGGTGTAGGAACCGGGAAAACAATTGTATATCTTCTATATGCAATT
TGCTATGCGCGTTATACTGGGAAACCAGCGATTATCGCTTGTGCAGATGAAACGTTAATTGAGCAGCTTGTAAAAGAAGA
AGGGGACATTGCTAAATTATCTGAGGCATTAGGCTTATCGGTAGATGTAAGACTTGCGAAATCAATGGATAATTATTTAT
GTTTACGTAAACTTGAAGATGTTATGAGTGGACGAGCTCCAGAAGTAATTGAAGATGTATACTACGAATTACCGCAGTTT
GTATTTGACCACGGTACGATGCAAAACTTTACTCACTATGGTGACCGAAAAGAATTTCCGCTTTTAAATGATGAGGAATG
GTCAAAAGTAAATTGGGATTACTTCCAAGATTGCTTCACTTGTGATTCTCGTCATCGTTGCGGGCAAACTCTATCACGTG
AACATTATCGTAAAGCGGCAGATTTAATTATTTGTTCTCAAGATTTCTATATGGATCATATTTGGACGTATGATGCTCGT
AAGCGTGAAGGACAAATTCCGTTATTACCAGAAAGCAGTTGTGTTGTATTCGATGAAGGACATCTTGTAGAATATGCAGC
TCAAAAAGCTTTAACATATCGTTTAAAGCAAACGATGATGGAGCAACTTTTAACGAGATTATTACAAAATGATATTCGCG
AGGAGTTTGCGCATTTAGTAGAAGAAACAATTTGGCAAACAGAGCGATTCTTTGATGTGTTACAAGAGAATAAAAAAGAA
ATTGCTGGTTCTGATCGTTTAGAAATTACTGTGACAGAAAAAGTAACGGCTGAAGCGAAGCGACTTTATGCAAAAATTGG
TGAAGTCGGGGACGCATTAGTATTTGAAAGTGAAATGCATACAGTAAACACGTATGATTTAAATATCGTTGATGAACATT
TAGATGTATTAGAGCATTCACTTCGCCTATTCATGCACGAGAAAAATGTAATTACATGGGGTGAAGAAGGTGATGGAGCC
TTCACGTTAGTAATTATGCCGCGTGCAGTTGAAGAAGTATTACAAGAGAAAGTATTCTCAAAGAAAATCCCGTATATTTT
CTCTTCTGCTACATTATCTAACAACGATTCATTCTCATTTACAGCAAATAGCCTAGGGGTAAAAGATTACTTATCATTCT
CAGTTGCCTCACCGTTTGATTATGAGGAGCAAATGGCAGTAAACTTACTATCTCATACGAAAGAAAACGAATGGGAAAGA
AAGTGTCAATATACACTTGAAAATATACAAAAAACAAATGGTCGTACACTTGTATTATTCCGTACAACGCAAGAACTTGC
AGCGTTTAAAGAGTATGTAAGTAAAGAACAAATGTCAGTTCCATTCCTATATGAAGGGGACCAAGAAATTAGTCAGCTTG
TTTCTCGTTTCCAAAATGAAGAAGAAACTGTACTTTGTGCCGTTCATTTATGGGAAGGTTTAGATATTCCTGGTTCATCA
TTATCACATGTTATTATTTGGTCATTACCATTCCCTCCAAACGATCCTGTGTTTGAAGCGAAGCGTAAACATGTGAATGA
TCCATTCTGGGATGTAGATGTACCGTATATGATTTTACGTCTTCGTCAAGGAATTGGACGTTTAATTCGTACGAGTGACG
ATAAAGGGGCTATATCAATCTTCTTATCTGATACTGAAGATGAGAAAGTGGTAGAAGCAGTGAAAAAGGTACTACCAGTA
GAAGGTAAAGAATTATAA

Upstream 100 bases:

>100_bases
CGTGTATTTCTATGTATTGCAACAGGGGAAAGTGGCTGCACCTATATGAGTAGCAGTTGCTATATCTTTTATAGAAAAAC
TTTTTGGTTGGAGGCTAAGG

Downstream 100 bases:

>100_bases
GGAGAAAGCTTGGCGCTTGCCAAGCTTTTTTTCTATTATATATAAAAGGAATTTAGATTTTCGTGTCGAATTAAGTTTGA
GGTAGAAAAAGGAGGTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 645; Mature: 645

Protein sequence:

>645_residues
MFTEKRLPFEVGKQDNFYDKLNEWIGDVFYDILPEKGFEERDEQIFMAFQLERAFQEKKVMFAEAGVGTGKTIVYLLYAI
CYARYTGKPAIIACADETLIEQLVKEEGDIAKLSEALGLSVDVRLAKSMDNYLCLRKLEDVMSGRAPEVIEDVYYELPQF
VFDHGTMQNFTHYGDRKEFPLLNDEEWSKVNWDYFQDCFTCDSRHRCGQTLSREHYRKAADLIICSQDFYMDHIWTYDAR
KREGQIPLLPESSCVVFDEGHLVEYAAQKALTYRLKQTMMEQLLTRLLQNDIREEFAHLVEETIWQTERFFDVLQENKKE
IAGSDRLEITVTEKVTAEAKRLYAKIGEVGDALVFESEMHTVNTYDLNIVDEHLDVLEHSLRLFMHEKNVITWGEEGDGA
FTLVIMPRAVEEVLQEKVFSKKIPYIFSSATLSNNDSFSFTANSLGVKDYLSFSVASPFDYEEQMAVNLLSHTKENEWER
KCQYTLENIQKTNGRTLVLFRTTQELAAFKEYVSKEQMSVPFLYEGDQEISQLVSRFQNEEETVLCAVHLWEGLDIPGSS
LSHVIIWSLPFPPNDPVFEAKRKHVNDPFWDVDVPYMILRLRQGIGRLIRTSDDKGAISIFLSDTEDEKVVEAVKKVLPV
EGKEL

Sequences:

>Translated_645_residues
MFTEKRLPFEVGKQDNFYDKLNEWIGDVFYDILPEKGFEERDEQIFMAFQLERAFQEKKVMFAEAGVGTGKTIVYLLYAI
CYARYTGKPAIIACADETLIEQLVKEEGDIAKLSEALGLSVDVRLAKSMDNYLCLRKLEDVMSGRAPEVIEDVYYELPQF
VFDHGTMQNFTHYGDRKEFPLLNDEEWSKVNWDYFQDCFTCDSRHRCGQTLSREHYRKAADLIICSQDFYMDHIWTYDAR
KREGQIPLLPESSCVVFDEGHLVEYAAQKALTYRLKQTMMEQLLTRLLQNDIREEFAHLVEETIWQTERFFDVLQENKKE
IAGSDRLEITVTEKVTAEAKRLYAKIGEVGDALVFESEMHTVNTYDLNIVDEHLDVLEHSLRLFMHEKNVITWGEEGDGA
FTLVIMPRAVEEVLQEKVFSKKIPYIFSSATLSNNDSFSFTANSLGVKDYLSFSVASPFDYEEQMAVNLLSHTKENEWER
KCQYTLENIQKTNGRTLVLFRTTQELAAFKEYVSKEQMSVPFLYEGDQEISQLVSRFQNEEETVLCAVHLWEGLDIPGSS
LSHVIIWSLPFPPNDPVFEAKRKHVNDPFWDVDVPYMILRLRQGIGRLIRTSDDKGAISIFLSDTEDEKVVEAVKKVLPV
EGKEL
>Mature_645_residues
MFTEKRLPFEVGKQDNFYDKLNEWIGDVFYDILPEKGFEERDEQIFMAFQLERAFQEKKVMFAEAGVGTGKTIVYLLYAI
CYARYTGKPAIIACADETLIEQLVKEEGDIAKLSEALGLSVDVRLAKSMDNYLCLRKLEDVMSGRAPEVIEDVYYELPQF
VFDHGTMQNFTHYGDRKEFPLLNDEEWSKVNWDYFQDCFTCDSRHRCGQTLSREHYRKAADLIICSQDFYMDHIWTYDAR
KREGQIPLLPESSCVVFDEGHLVEYAAQKALTYRLKQTMMEQLLTRLLQNDIREEFAHLVEETIWQTERFFDVLQENKKE
IAGSDRLEITVTEKVTAEAKRLYAKIGEVGDALVFESEMHTVNTYDLNIVDEHLDVLEHSLRLFMHEKNVITWGEEGDGA
FTLVIMPRAVEEVLQEKVFSKKIPYIFSSATLSNNDSFSFTANSLGVKDYLSFSVASPFDYEEQMAVNLLSHTKENEWER
KCQYTLENIQKTNGRTLVLFRTTQELAAFKEYVSKEQMSVPFLYEGDQEISQLVSRFQNEEETVLCAVHLWEGLDIPGSS
LSHVIIWSLPFPPNDPVFEAKRKHVNDPFWDVDVPYMILRLRQGIGRLIRTSDDKGAISIFLSDTEDEKVVEAVKKVLPV
EGKEL

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=608, Percent_Identity=26.8092105263158, Blast_Score=176, Evalue=3e-45,
Organism=Escherichia coli, GI1787018, Length=718, Percent_Identity=23.8161559888579, Blast_Score=87, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014013
- InterPro:   IPR006555 [H]

Pfam domain/function: NA

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 74776; Mature: 74776

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTEKRLPFEVGKQDNFYDKLNEWIGDVFYDILPEKGFEERDEQIFMAFQLERAFQEKKV
CCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MFAEAGVGTGKTIVYLLYAICYARYTGKPAIIACADETLIEQLVKEEGDIAKLSEALGLS
EEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHCCC
VDVRLAKSMDNYLCLRKLEDVMSGRAPEVIEDVYYELPQFVFDHGTMQNFTHYGDRKEFP
EEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCC
LLNDEEWSKVNWDYFQDCFTCDSRHRCGQTLSREHYRKAADLIICSQDFYMDHIWTYDAR
CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCEEEECCCHHHHHEEECCCC
KREGQIPLLPESSCVVFDEGHLVEYAAQKALTYRLKQTMMEQLLTRLLQNDIREEFAHLV
CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EETIWQTERFFDVLQENKKEIAGSDRLEITVTEKVTAEAKRLYAKIGEVGDALVFESEMH
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCHHEEECCCC
TVNTYDLNIVDEHLDVLEHSLRLFMHEKNVITWGEEGDGAFTLVIMPRAVEEVLQEKVFS
EEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCHHHHHHHHHHHHH
KKIPYIFSSATLSNNDSFSFTANSLGVKDYLSFSVASPFDYEEQMAVNLLSHTKENEWER
HCCCCEEECCEECCCCCEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHH
KCQYTLENIQKTNGRTLVLFRTTQELAAFKEYVSKEQMSVPFLYEGDQEISQLVSRFQNE
HHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCC
EETVLCAVHLWEGLDIPGSSLSHVIIWSLPFPPNDPVFEAKRKHVNDPFWDVDVPYMILR
CCEEEEEEEHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHH
LRQGIGRLIRTSDDKGAISIFLSDTEDEKVVEAVKKVLPVEGKEL
HHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MFTEKRLPFEVGKQDNFYDKLNEWIGDVFYDILPEKGFEERDEQIFMAFQLERAFQEKKV
CCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MFAEAGVGTGKTIVYLLYAICYARYTGKPAIIACADETLIEQLVKEEGDIAKLSEALGLS
EEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHCCC
VDVRLAKSMDNYLCLRKLEDVMSGRAPEVIEDVYYELPQFVFDHGTMQNFTHYGDRKEFP
EEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCC
LLNDEEWSKVNWDYFQDCFTCDSRHRCGQTLSREHYRKAADLIICSQDFYMDHIWTYDAR
CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCEEEECCCHHHHHEEECCCC
KREGQIPLLPESSCVVFDEGHLVEYAAQKALTYRLKQTMMEQLLTRLLQNDIREEFAHLV
CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EETIWQTERFFDVLQENKKEIAGSDRLEITVTEKVTAEAKRLYAKIGEVGDALVFESEMH
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCHHEEECCCC
TVNTYDLNIVDEHLDVLEHSLRLFMHEKNVITWGEEGDGAFTLVIMPRAVEEVLQEKVFS
EEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCHHHHHHHHHHHHH
KKIPYIFSSATLSNNDSFSFTANSLGVKDYLSFSVASPFDYEEQMAVNLLSHTKENEWER
HCCCCEEECCEECCCCCEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHH
KCQYTLENIQKTNGRTLVLFRTTQELAAFKEYVSKEQMSVPFLYEGDQEISQLVSRFQNE
HHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCC
EETVLCAVHLWEGLDIPGSSLSHVIIWSLPFPPNDPVFEAKRKHVNDPFWDVDVPYMILR
CCEEEEEEEHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHH
LRQGIGRLIRTSDDKGAISIFLSDTEDEKVVEAVKKVLPVEGKEL
HHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]