Click here to switch to the map view.

The map label for this gene is ypoC [H]

Identifier: 218902759

GI number: 218902759

Start: 1548066

End: 1548584

Strand: Direct

Name: ypoC [H]

Synonym: BCAH820_1642

Alternate gene names: 218902759

Gene position: 1548066-1548584 (Clockwise)

Preceding gene: 218902758

Following gene: 218902762

Centisome position: 29.19

GC content: 30.25

Gene sequence:

>519_bases
ATGGAGCGAGTTATAGAAATACCGAGAGAATTTCGGTGCTTACCATTTTTTAAAGAAAGTGTAAATTCGATTGCGTATTA
TGCAGAACAGTCTTTCGAAGAAACAATACAAAAGACTTATTTTATATATGATATTGAAAAACAATATGAGCCATGGAATG
AAATTGAAAACAGTATTCCGGTAATGTTGAATGTATGGAAAAATAAGCATGAGGACATTGCTACTTTATTTCGAAACAGA
AAGAAACAAGAAGCTGAAGGTCCGATGATTCTTTTTGCAGCACATTTATTATCAATTGTATATTGGCTAAATGAGCAACC
TGTTCATAGTTTGAATAAAATAGAAGATTTTACGAGTGAATTGGAAGTGCAACCAGTTAATTTTATAGAGCGATATTCGT
TCATTATAAAGAAACCGAATAATTATCATTCTTATATTCAGTTAGCACAGTTGTATATTGAAATAGAAAAGCTATATGTA
AAGAAAATGATAACAAAAAAGAAGTCCTGTTCTCGTTAA

Upstream 100 bases:

>100_bases
TGGACGTTATCACTGCAAGGCACAGCGACCACAATGCGAAGAGTGCCCGTTACTAGAAGTATGCCGAGAAGGAAAGAAGC
GAATGAAGGGGAAATAAAGG

Downstream 100 bases:

>100_bases
GAGAAAGGACTTCTTTTTTTGTATTAAGACTCTGTTGTAACAACATTTCCGTCTGCGTGAGGTGTATCTCCTCCGGTATT
TTGTTGTTGTTCTTGCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: ORFY [H]

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MERVIEIPREFRCLPFFKESVNSIAYYAEQSFEETIQKTYFIYDIEKQYEPWNEIENSIPVMLNVWKNKHEDIATLFRNR
KKQEAEGPMILFAAHLLSIVYWLNEQPVHSLNKIEDFTSELEVQPVNFIERYSFIIKKPNNYHSYIQLAQLYIEIEKLYV
KKMITKKKSCSR

Sequences:

>Translated_172_residues
MERVIEIPREFRCLPFFKESVNSIAYYAEQSFEETIQKTYFIYDIEKQYEPWNEIENSIPVMLNVWKNKHEDIATLFRNR
KKQEAEGPMILFAAHLLSIVYWLNEQPVHSLNKIEDFTSELEVQPVNFIERYSFIIKKPNNYHSYIQLAQLYIEIEKLYV
KKMITKKKSCSR
>Mature_172_residues
MERVIEIPREFRCLPFFKESVNSIAYYAEQSFEETIQKTYFIYDIEKQYEPWNEIENSIPVMLNVWKNKHEDIATLFRNR
KKQEAEGPMILFAAHLLSIVYWLNEQPVHSLNKIEDFTSELEVQPVNFIERYSFIIKKPNNYHSYIQLAQLYIEIEKLYV
KKMITKKKSCSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20799; Mature: 20799

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERVIEIPREFRCLPFFKESVNSIAYYAEQSFEETIQKTYFIYDIEKQYEPWNEIENSIP
CCHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCHHHHHCCCC
VMLNVWKNKHEDIATLFRNRKKQEAEGPMILFAAHLLSIVYWLNEQPVHSLNKIEDFTSE
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LEVQPVNFIERYSFIIKKPNNYHSYIQLAQLYIEIEKLYVKKMITKKKSCSR
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MERVIEIPREFRCLPFFKESVNSIAYYAEQSFEETIQKTYFIYDIEKQYEPWNEIENSIP
CCHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCHHHHHCCCC
VMLNVWKNKHEDIATLFRNRKKQEAEGPMILFAAHLLSIVYWLNEQPVHSLNKIEDFTSE
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LEVQPVNFIERYSFIIKKPNNYHSYIQLAQLYIEIEKLYVKKMITKKKSCSR
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704260; 7814321; 9384377 [H]