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The map label for this gene is 218902666

Identifier: 218902666

GI number: 218902666

Start: 1462533

End: 1464071

Strand: Reverse

Name: 218902666

Synonym: BCAH820_1549

Alternate gene names: NA

Gene position: 1464071-1462533 (Counterclockwise)

Preceding gene: 218902667

Following gene: 218902665

Centisome position: 27.61

GC content: 53.74

Gene sequence:

>1539_bases
TTGTATATCGCTAAGTTATTCAAAGTAGATTGTTGTACGATTGACAAACTAGTTAGACTCATAACAGAGATCCAAACTAT
TCTAGTTCAATACGGATCAGGTTGCCTTGGAGGCGGAGGCGCAACAGGTGCTACTGGCGCTACTGGCGCTACTGGGCCTC
AAGGGCCGGCGGGTGCTACTGGTGCTACTGGGCCTCAAGGACCAGCGGGTGCGCAAGGTGCTACTGGACCTCAAGGACCT
CAAGGTGCTCAAGGACCAGCAGGTGTTCAAGGTGCTACTGGACCTCAAGGACCTCAAGGTATTCAAGGACCAGCGGGTGC
TACTGGCGCTACTGGACCTCAAGGACCTCAAGGTATTCAAGGACCAGCGGGTGCTACTGGCGCTACTGGACCTCAAGGAC
CTCAAGGTATTCAAGGACCAGCGGGTGCTACTGGCGCTACTGGACCTCAAGGGCCTCAAGGTGTTCAAGGACCGGCGGGT
GCTACTGGCGCTACTGGTGCGCAAGGTGCTCAAGGACCAGCGGGTGCTACTGGCGCTACTGGTGCGCAAGGTGCTCAAGG
GCCAGCGGGTGCTACTGGACCTCAAGGTATTCAAGGACCGGCAGGTGCTACTGGCGCTACTGGTGCGCAAGGTGCTCAAG
GACCGGCGGGTGCTACTGGCGCTACTGGTGCGCAAGGTGCTCAAGGGCCAGCGGGTGCTACTGGCGCTACTGGTGCGCAA
GGTGCTCAAGGGCCAGCGGGTGCTACTGGACCTCAAGGACCTCAAGGTATTCAAGGACCAGCAGGTGCTACTGGCGCTAC
TGGTGCGCAAGGGCCAGCGGGTGCTACTGGACCTCAAGGTATTCAAGGACCGGCAGGTGCTACTGGCGCTACTGGTGCGC
AAGGTGCTCAAGGACCAGCGGGTGCTACTGGCGCTACTGGTGCGCAAGGTGCTCAAGGACCGGCAGGTGCTACTGGCGCT
ACTGGTGCGCAAGGTGCTCAAGGGCCAGCAGGTGCTACTGGCGCTACTGGTGCGCAAGGTGCTCAAGGGCCAGCGGGTGC
TACTGGACCTCAAGGTATTCAAGGACCGGCAGGTGCTACTGGCGCTACTGGTGCGCAAGGACCAGCGGGTGCTACTGGCG
CTACTGGACCAGCGGGTACACCAATTCCTGTAACGATTGCGGCAATCGGAAACTCCAATGCTCAAACAATATCCCCTGGT
ACAAACATCCAATTTAATCAAGTTTTCGAAATAAATAACATTAATTTTAATGACACTGCAGATACTTTAACAATTTTAGA
AACAGGCGTATATGATATTAGTTTCTCAGCGTCTACAACTTTCCCAGGATCTTCACCATTTGGATTCGGTATTTCATTCA
ATGGTCAACCACCTACTCGTAATTTCTCAACTAACGTTATCGGTAGTGCTGTATCGTTCTCTACAATCGTTACTTTAGAA
GCTGGTACAACAATTTCTGTACAACCTACAGCAAACACTATTTCTATTCCTAACACAGGCGATACAACAGCAACACTATC
TGTATTCCGAATTTACTAA

Upstream 100 bases:

>100_bases
TGGAAATTCTATTATTGCTAATTTATTAACTATTTTAAGAACAACACCTTTCTCATGCGGAGCATTATACGTTGAGCTAC
AAAGCTTGCTTAATTATTTA

Downstream 100 bases:

>100_bases
TTTTCGCTTAAAAAGTATATTTATAATAATATGTATCGTTTAACCGTGCATTAAATCTCTCTTTATATAGAAAGGAGCAC
TTATTTGGGAGGATAAGTGC

Product: group-specific protein

Products: NA

Alternate protein names: Collagen Triple Helix Repeat Protein; Group-Specific Protein; Collagen Triple Helix Repeat Domain-Containing Protein; Collagen-Like Protein

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MYIAKLFKVDCCTIDKLVRLITEIQTILVQYGSGCLGGGGATGATGATGATGPQGPAGATGATGPQGPAGAQGATGPQGP
QGAQGPAGVQGATGPQGPQGIQGPAGATGATGPQGPQGIQGPAGATGATGPQGPQGIQGPAGATGATGPQGPQGVQGPAG
ATGATGAQGAQGPAGATGATGAQGAQGPAGATGPQGIQGPAGATGATGAQGAQGPAGATGATGAQGAQGPAGATGATGAQ
GAQGPAGATGPQGPQGIQGPAGATGATGAQGPAGATGPQGIQGPAGATGATGAQGAQGPAGATGATGAQGAQGPAGATGA
TGAQGAQGPAGATGATGAQGAQGPAGATGPQGIQGPAGATGATGAQGPAGATGATGPAGTPIPVTIAAIGNSNAQTISPG
TNIQFNQVFEINNINFNDTADTLTILETGVYDISFSASTTFPGSSPFGFGISFNGQPPTRNFSTNVIGSAVSFSTIVTLE
AGTTISVQPTANTISIPNTGDTTATLSVFRIY

Sequences:

>Translated_512_residues
MYIAKLFKVDCCTIDKLVRLITEIQTILVQYGSGCLGGGGATGATGATGATGPQGPAGATGATGPQGPAGAQGATGPQGP
QGAQGPAGVQGATGPQGPQGIQGPAGATGATGPQGPQGIQGPAGATGATGPQGPQGIQGPAGATGATGPQGPQGVQGPAG
ATGATGAQGAQGPAGATGATGAQGAQGPAGATGPQGIQGPAGATGATGAQGAQGPAGATGATGAQGAQGPAGATGATGAQ
GAQGPAGATGPQGPQGIQGPAGATGATGAQGPAGATGPQGIQGPAGATGATGAQGAQGPAGATGATGAQGAQGPAGATGA
TGAQGAQGPAGATGATGAQGAQGPAGATGPQGIQGPAGATGATGAQGPAGATGATGPAGTPIPVTIAAIGNSNAQTISPG
TNIQFNQVFEINNINFNDTADTLTILETGVYDISFSASTTFPGSSPFGFGISFNGQPPTRNFSTNVIGSAVSFSTIVTLE
AGTTISVQPTANTISIPNTGDTTATLSVFRIY
>Mature_512_residues
MYIAKLFKVDCCTIDKLVRLITEIQTILVQYGSGCLGGGGATGATGATGATGPQGPAGATGATGPQGPAGAQGATGPQGP
QGAQGPAGVQGATGPQGPQGIQGPAGATGATGPQGPQGIQGPAGATGATGPQGPQGIQGPAGATGATGPQGPQGVQGPAG
ATGATGAQGAQGPAGATGATGAQGAQGPAGATGPQGIQGPAGATGATGAQGAQGPAGATGATGAQGAQGPAGATGATGAQ
GAQGPAGATGPQGPQGIQGPAGATGATGAQGPAGATGPQGIQGPAGATGATGAQGAQGPAGATGATGAQGAQGPAGATGA
TGAQGAQGPAGATGATGAQGAQGPAGATGPQGIQGPAGATGATGAQGPAGATGATGPAGTPIPVTIAAIGNSNAQTISPG
TNIQFNQVFEINNINFNDTADTLTILETGVYDISFSASTTFPGSSPFGFGISFNGQPPTRNFSTNVIGSAVSFSTIVTLE
AGTTISVQPTANTISIPNTGDTTATLSVFRIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI115392133, Length=371, Percent_Identity=40.9703504043127, Blast_Score=159, Evalue=6e-39,
Organism=Homo sapiens, GI111118970, Length=364, Percent_Identity=40.3846153846154, Blast_Score=136, Evalue=5e-32,
Organism=Homo sapiens, GI111118968, Length=364, Percent_Identity=40.3846153846154, Blast_Score=135, Evalue=8e-32,
Organism=Homo sapiens, GI111118972, Length=364, Percent_Identity=40.3846153846154, Blast_Score=135, Evalue=8e-32,
Organism=Homo sapiens, GI89363017, Length=381, Percent_Identity=40.4199475065617, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI111118976, Length=376, Percent_Identity=45.2127659574468, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI111118974, Length=376, Percent_Identity=45.2127659574468, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI110735435, Length=389, Percent_Identity=37.2750642673522, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI4502951, Length=302, Percent_Identity=41.7218543046358, Blast_Score=112, Evalue=9e-25,
Organism=Homo sapiens, GI48762934, Length=423, Percent_Identity=37.8250591016548, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI11386161, Length=313, Percent_Identity=42.1725239616613, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI18780273, Length=338, Percent_Identity=38.1656804733728, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI183583553, Length=292, Percent_Identity=37.6712328767123, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI32140760, Length=254, Percent_Identity=41.3385826771654, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI5803080, Length=233, Percent_Identity=42.0600858369099, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI4502961, Length=336, Percent_Identity=37.202380952381, Blast_Score=103, Evalue=6e-22,
Organism=Homo sapiens, GI98985806, Length=350, Percent_Identity=38.5714285714286, Blast_Score=102, Evalue=7e-22,
Organism=Homo sapiens, GI98985810, Length=350, Percent_Identity=38.5714285714286, Blast_Score=102, Evalue=8e-22,
Organism=Homo sapiens, GI299523257, Length=350, Percent_Identity=38.5714285714286, Blast_Score=102, Evalue=9e-22,
Organism=Homo sapiens, GI115527070, Length=311, Percent_Identity=39.871382636656, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI115527066, Length=311, Percent_Identity=39.871382636656, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI299523253, Length=350, Percent_Identity=38.5714285714286, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI115527062, Length=311, Percent_Identity=39.871382636656, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI156616290, Length=353, Percent_Identity=35.6940509915014, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI122937273, Length=406, Percent_Identity=28.3251231527094, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI154759255, Length=515, Percent_Identity=30.6796116504854, Blast_Score=100, Evalue=5e-21,
Organism=Homo sapiens, GI73486666, Length=348, Percent_Identity=41.0919540229885, Blast_Score=99, Evalue=8e-21,
Organism=Homo sapiens, GI116256354, Length=505, Percent_Identity=32.4752475247525, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI110349772, Length=367, Percent_Identity=40.8719346049046, Blast_Score=93, Evalue=7e-19,
Organism=Homo sapiens, GI65301115, Length=160, Percent_Identity=43.125, Blast_Score=93, Evalue=7e-19,
Organism=Homo sapiens, GI56847616, Length=160, Percent_Identity=43.125, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI87196339, Length=324, Percent_Identity=40.1234567901235, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI148536823, Length=396, Percent_Identity=33.5858585858586, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI16357503, Length=396, Percent_Identity=33.5858585858586, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI73486664, Length=213, Percent_Identity=42.7230046948357, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI148536825, Length=313, Percent_Identity=36.1022364217252, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI38570073, Length=416, Percent_Identity=31.7307692307692, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI89276751, Length=353, Percent_Identity=34.8441926345609, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI240255535, Length=337, Percent_Identity=37.0919881305638, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI40805823, Length=233, Percent_Identity=39.0557939914163, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI55743106, Length=337, Percent_Identity=37.0919881305638, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI55743098, Length=337, Percent_Identity=37.0919881305638, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI38570075, Length=424, Percent_Identity=32.311320754717, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI119829187, Length=232, Percent_Identity=42.2413793103448, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI119508426, Length=228, Percent_Identity=40.7894736842105, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI47778921, Length=373, Percent_Identity=36.9973190348526, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI145701009, Length=265, Percent_Identity=27.5471698113208, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI89142730, Length=437, Percent_Identity=31.8077803203661, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI29725624, Length=407, Percent_Identity=34.8894348894349, Blast_Score=67, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71992048, Length=342, Percent_Identity=43.5672514619883, Blast_Score=166, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI71988210, Length=371, Percent_Identity=35.0404312668464, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71988208, Length=371, Percent_Identity=35.0404312668464, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17566918, Length=290, Percent_Identity=33.7931034482759, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI25153132, Length=258, Percent_Identity=34.8837209302326, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17569903, Length=189, Percent_Identity=41.2698412698413, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17535735, Length=196, Percent_Identity=37.2448979591837, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17539078, Length=200, Percent_Identity=37.5, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17507107, Length=145, Percent_Identity=44.8275862068966, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI115532372, Length=201, Percent_Identity=33.8308457711443, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17568911, Length=354, Percent_Identity=35.0282485875706, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17553572, Length=179, Percent_Identity=40.7821229050279, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17568913, Length=354, Percent_Identity=35.0282485875706, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24581820, Length=349, Percent_Identity=41.2607449856734, Blast_Score=128, Evalue=9e-30,
Organism=Drosophila melanogaster, GI24581822, Length=349, Percent_Identity=41.2607449856734, Blast_Score=128, Evalue=9e-30,
Organism=Drosophila melanogaster, GI24581824, Length=349, Percent_Identity=41.2607449856734, Blast_Score=128, Evalue=9e-30,
Organism=Drosophila melanogaster, GI17137252, Length=376, Percent_Identity=38.8297872340425, Blast_Score=126, Evalue=4e-29,
Organism=Drosophila melanogaster, GI221379525, Length=130, Percent_Identity=40.7692307692308, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221379533, Length=116, Percent_Identity=41.3793103448276, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46124; Mature: 46124

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCEEEEECCCCEEECCCCCCCEEEEEEEEEC
>Mature Secondary Structure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CCCEEEEECCCCEEECCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA