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The map label for this gene is yhfW [H]

Identifier: 218902524

GI number: 218902524

Start: 1341062

End: 1342255

Strand: Direct

Name: yhfW [H]

Synonym: BCAH820_1407

Alternate gene names: 218902524

Gene position: 1341062-1342255 (Clockwise)

Preceding gene: 218902523

Following gene: 218902525

Centisome position: 25.29

GC content: 34.76

Gene sequence:

>1194_bases
ATGAACCTTATAAGTGGTAAGTTGTTTTGGAATAGAGGAGTTTCTGTACCTTGTTATCCACCGTTAGAAAATGATATGAT
ATGTGATGTGCTTGTAGTCGGAAGTGGCGAAGCAGGTGCCCATATAGCGTATTTTTTAGCGAAAATTGGCATGAGTGTGA
TGCTTATTGAAAAAAGAGAAATTGCATGTGGTAGTACATTTGCAAATGTAGGTTTATTACAGTTTTTTCATGATAAATCG
TTAACCTCACTTATTCATACATTTGGTGAAGAAAAAGGGGTACGAGCATATAAGCTTTGTTACGAAGCGTTACGAACAAT
GGAGAAAGTTGTACCGACTCTCGATATTGATCCCCAGTTTATTCCACGAAATAGTTTATATTATGCAAGTAAAAGTGAAG
ATGTCTCATCTTTACAAGAGGAGTACAATACGTTACAGAAATATGGATTTCCTGTTGAGTATTTTACAGAAGTTGATATT
AAGGAACGTTATTCCTTTACAAAACAAGCGGCATTATATACACATGGTGATGCTGAGGTAAATCCGTATTTATTAGCGCA
TAGTCTTTTGCATAAAGCAAATCAAATGGGTGCTATTATACATGAACATACAGAGGTCATACATATAAAAAAACGTCAAA
ATGATTTAATTTGTTATACGAAAACAGGAAATCAAATTGTAGCAAAGAATATTATTATGGCGACGGGCTATGAAGCGCTT
TTTGGGAAGAAAGAAAAAAATACAACAGTAGAGACATCTTATGCAGTTGTGACAAATGAAATAGATCAGTTTGAAGGCTG
GCATGAGCGATCATTGATTTGGGAAACAGCACGTCCCTACTTATATTTTCGGACGTATAAAAACCGCATTATGGTAGGCG
GATTAGATGAAGCGATGCAAATTCAATCGATTGGTGATACGAAACTATTGCATAAGCGTGATATCCTTATTAACATTGTA
AGAGAGATGTTCCCCCAGTATAAGAATATACAAGCAGAGTATTATTGGGCAGCAGCATTTGGCAGTAGTCATGATGGTCT
TCCTATTTTAAAAGAAGACAAAAAGATACATAATTTATTTTACGCATTACTGCACGGAGGTAATGGAACTGTGTATGGAA
TGGTATTTGCAAAAATATTTGAGCAGTTATTTACAAATAAAGAAAGGGAAGATTTTTCTTTATTTAATCGATAG

Upstream 100 bases:

>100_bases
AGTAAAAATGAAAAATCCAACTAGCGTTGTGTTAGTTGGATTTTTTTATGGAAAATAACAAAACATAGAAAGGAGAAATT
TATATTGTAGGAGTATAATT

Downstream 100 bases:

>100_bases
AAAAAAGGTAGCGAAGTGATGGAATGAGAGATATAAAAAAGTTTTTACAAAAATTGCGTCCCGTACAACTCATTGTTTTA
TTTTATTTATTAGCAGTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MNLISGKLFWNRGVSVPCYPPLENDMICDVLVVGSGEAGAHIAYFLAKIGMSVMLIEKREIACGSTFANVGLLQFFHDKS
LTSLIHTFGEEKGVRAYKLCYEALRTMEKVVPTLDIDPQFIPRNSLYYASKSEDVSSLQEEYNTLQKYGFPVEYFTEVDI
KERYSFTKQAALYTHGDAEVNPYLLAHSLLHKANQMGAIIHEHTEVIHIKKRQNDLICYTKTGNQIVAKNIIMATGYEAL
FGKKEKNTTVETSYAVVTNEIDQFEGWHERSLIWETARPYLYFRTYKNRIMVGGLDEAMQIQSIGDTKLLHKRDILINIV
REMFPQYKNIQAEYYWAAAFGSSHDGLPILKEDKKIHNLFYALLHGGNGTVYGMVFAKIFEQLFTNKEREDFSLFNR

Sequences:

>Translated_397_residues
MNLISGKLFWNRGVSVPCYPPLENDMICDVLVVGSGEAGAHIAYFLAKIGMSVMLIEKREIACGSTFANVGLLQFFHDKS
LTSLIHTFGEEKGVRAYKLCYEALRTMEKVVPTLDIDPQFIPRNSLYYASKSEDVSSLQEEYNTLQKYGFPVEYFTEVDI
KERYSFTKQAALYTHGDAEVNPYLLAHSLLHKANQMGAIIHEHTEVIHIKKRQNDLICYTKTGNQIVAKNIIMATGYEAL
FGKKEKNTTVETSYAVVTNEIDQFEGWHERSLIWETARPYLYFRTYKNRIMVGGLDEAMQIQSIGDTKLLHKRDILINIV
REMFPQYKNIQAEYYWAAAFGSSHDGLPILKEDKKIHNLFYALLHGGNGTVYGMVFAKIFEQLFTNKEREDFSLFNR
>Mature_397_residues
MNLISGKLFWNRGVSVPCYPPLENDMICDVLVVGSGEAGAHIAYFLAKIGMSVMLIEKREIACGSTFANVGLLQFFHDKS
LTSLIHTFGEEKGVRAYKLCYEALRTMEKVVPTLDIDPQFIPRNSLYYASKSEDVSSLQEEYNTLQKYGFPVEYFTEVDI
KERYSFTKQAALYTHGDAEVNPYLLAHSLLHKANQMGAIIHEHTEVIHIKKRQNDLICYTKTGNQIVAKNIIMATGYEAL
FGKKEKNTTVETSYAVVTNEIDQFEGWHERSLIWETARPYLYFRTYKNRIMVGGLDEAMQIQSIGDTKLLHKRDILINIV
REMFPQYKNIQAEYYWAAAFGSSHDGLPILKEDKKIHNLFYALLHGGNGTVYGMVFAKIFEQLFTNKEREDFSLFNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI24797151, Length=388, Percent_Identity=23.4536082474227, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1787559, Length=385, Percent_Identity=22.0779220779221, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR017941
- InterPro:   IPR005805 [H]

Pfam domain/function: PF01266 DAO; PF00355 Rieske [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 45523; Mature: 45523

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLISGKLFWNRGVSVPCYPPLENDMICDVLVVGSGEAGAHIAYFLAKIGMSVMLIEKRE
CCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEEECCC
IACGSTFANVGLLQFFHDKSLTSLIHTFGEEKGVRAYKLCYEALRTMEKVVPTLDIDPQF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
IPRNSLYYASKSEDVSSLQEEYNTLQKYGFPVEYFTEVDIKERYSFTKQAALYTHGDAEV
CCCCCEEECCCCCHHHHHHHHHHHHHHHCCCHHHEEECCHHHHHHHHHHHEEEECCCCCC
NPYLLAHSLLHKANQMGAIIHEHTEVIHIKKRQNDLICYTKTGNQIVAKNIIMATGYEAL
CHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCEEEHHHEEEECCCHHH
FGKKEKNTTVETSYAVVTNEIDQFEGWHERSLIWETARPYLYFRTYKNRIMVGGLDEAMQ
HCCCCCCCEEEEEEEEEECCHHHHCCCHHHCEEEECCCCEEEEEEECCEEEECCCCHHHH
IQSIGDTKLLHKRDILINIVREMFPQYKNIQAEYYWAAAFGSSHDGLPILKEDKKIHNLF
HHCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHH
YALLHGGNGTVYGMVFAKIFEQLFTNKEREDFSLFNR
HHHEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCC
>Mature Secondary Structure
MNLISGKLFWNRGVSVPCYPPLENDMICDVLVVGSGEAGAHIAYFLAKIGMSVMLIEKRE
CCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEEECCC
IACGSTFANVGLLQFFHDKSLTSLIHTFGEEKGVRAYKLCYEALRTMEKVVPTLDIDPQF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
IPRNSLYYASKSEDVSSLQEEYNTLQKYGFPVEYFTEVDIKERYSFTKQAALYTHGDAEV
CCCCCEEECCCCCHHHHHHHHHHHHHHHCCCHHHEEECCHHHHHHHHHHHEEEECCCCCC
NPYLLAHSLLHKANQMGAIIHEHTEVIHIKKRQNDLICYTKTGNQIVAKNIIMATGYEAL
CHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCEEEHHHEEEECCCHHH
FGKKEKNTTVETSYAVVTNEIDQFEGWHERSLIWETARPYLYFRTYKNRIMVGGLDEAMQ
HCCCCCCCEEEEEEEEEECCHHHHCCCHHHCEEEECCCCEEEEEEECCEEEECCCCHHHH
IQSIGDTKLLHKRDILINIVREMFPQYKNIQAEYYWAAAFGSSHDGLPILKEDKKIHNLF
HHCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHH
YALLHGGNGTVYGMVFAKIFEQLFTNKEREDFSLFNR
HHHEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]