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The map label for this gene is yhjP [H]

Identifier: 218902053

GI number: 218902053

Start: 887313

End: 889052

Strand: Reverse

Name: yhjP [H]

Synonym: BCAH820_0935

Alternate gene names: 218902053

Gene position: 889052-887313 (Counterclockwise)

Preceding gene: 218902055

Following gene: 218902052

Centisome position: 16.77

GC content: 34.08

Gene sequence:

>1740_bases
ATGAAAATTATGGACTATTACATTAGACTAAGACTACATGCACAAGATCAACAACATATGCGAAATAGCTTACAAGAATT
AGCGGATGTTTTATATTGCAGTACGAAAAACGTAAAGATCTTATTAAAGAAAATGAGCGAGGAACAATTAATTAGCTGGA
CTCCAGGGCGAGGCCGTGGAAATAAAACGGAAATTCTATTTTCACATAATTTCGTAGAAGCGATTGAATCCTATACAGAT
GAACTGTTAGCGCAAGAAAAATTAAAAGATATCTTTCTTCTTTTAAAAGAACCCCTACCCCTTGCACTTCAAAAAAAGAT
AGAAAATAAACTACATCATCATTTTGGATACGAGCCTTCAAATGATATGTACGACATATTAAAAATTCCTATATCGAGAA
AGATATTCCCATTAGATCCGGCTTTTGTCGCTGTAACTACGGAGAGCCATCTTACGAGTCAAATTTTTGATACGTTAGTC
ATTTATAACGATGTTACGGAAAAAATGGAGCCGCACATTGCGCATACGTGGGAATTAAGTGAAGACGGGCTTACATGGAC
CTTTTATTTACGAAAGGATGTACATTTTCATAACGAAACAGTTTTAACTTCTAAAGATGTACAATTTTCATTTGAAAGAC
TAAAAGAAGTTCACTCTCCTTTCGAATGGTTAACAGAAGAAATTGTTCAAATTGAAACGCCATCACCACTGCAAATAAGG
TTCCATTTAGCAAAACCCAACCTTTTTTTCTTACACTATGTAAGTTCCATACAACTAGCAATTTTACCGCGTGAAGTGAG
TATCGAAAATCATCATTATATAGGTACCGGACCTTTCAAACTTACTCATTACTCTGAAGACAATATCGTACTCGAAGCAT
TCTCTCATTATTTTAAAGAGCGCGCTTTATTAGACCGTATTGAATTTTGGAGTATTCCTGATCATGTGCAAATCGATGCT
GATTATGAACTACCAAATGAAGAAGAAAATGAAAGGCATGATATACAAATAGAAGAAATAGGTTGTATTTATGCTGGATT
CAACTTTACAAAACCTGGTCCTCATCACGACATTTACTTTCGAAAGGCTTGGAGAGAACTATATGATGTTGAAACGATAC
TTCGTAGCATAGAGGGTAGACGAACAATTGCTGCATCAAGCTTTTTCCCTGAAAGAAGTCGCCAAGCTTCTAAAAGATCT
TACTCTTTAGAAAAAGCGAAAGAGTATTTAAAAAAGAGCACTTATAATGGAGAGACGATACATATTTACTTCTTCGCATT
TAAAGATAGTGCAAATGATGCATATTTCTTAAAAGAACGATGTGAAAGTTTAGGTATACAAGTAGAGCTTCACCCATTTC
TCGTTTCAGATTATATGAACCGTTCTATCGATCAACATGCCGATATTATTTTCATGGGAGAAGTGTTTGCTGCTGATCAT
GAACTTGCATTCTTAAATGTATTTAAAAATAAAAGCTGCTTCGTAAGTCGGTTCATGGACCCGCACTATGAAAAACAAAT
TAACTGTTTACTTGATACATTTTTATTAGAAGTAAATAAAGAAAAGCGCTACGAGCTCATGTATGAGATCGAAGAATTTT
TACAAACAGAACACATCATTTTATTTAACTATCACGTTTTAAAAAGAAAAACATATCCTTCTTCTTTAAAAAATGTAACA
ATTGATTCATTCGGTTGGGCAAATTTTGCAAAGTTATGGATACAGCCATCCATGTCTTAA

Upstream 100 bases:

>100_bases
CCCCCTCCTTATGCTTACTTATTTTACTTTGAAAAAAAGGAAGAAAAAGGTTAGAATATTCTAAAGAGTTTCCCCTTTTA
TATTAGAAGGAAGTGTATAT

Downstream 100 bases:

>100_bases
AATGCGATTCATTATAAAAGGAGAGGAACTATGAAACGCACCCTAGAAAAAAGATTTTCCTATCTATACACAGGTGAATT
ATTTTCAGTCATTACTTTTA

Product: putative ABC transporter, substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MKIMDYYIRLRLHAQDQQHMRNSLQELADVLYCSTKNVKILLKKMSEEQLISWTPGRGRGNKTEILFSHNFVEAIESYTD
ELLAQEKLKDIFLLLKEPLPLALQKKIENKLHHHFGYEPSNDMYDILKIPISRKIFPLDPAFVAVTTESHLTSQIFDTLV
IYNDVTEKMEPHIAHTWELSEDGLTWTFYLRKDVHFHNETVLTSKDVQFSFERLKEVHSPFEWLTEEIVQIETPSPLQIR
FHLAKPNLFFLHYVSSIQLAILPREVSIENHHYIGTGPFKLTHYSEDNIVLEAFSHYFKERALLDRIEFWSIPDHVQIDA
DYELPNEEENERHDIQIEEIGCIYAGFNFTKPGPHHDIYFRKAWRELYDVETILRSIEGRRTIAASSFFPERSRQASKRS
YSLEKAKEYLKKSTYNGETIHIYFFAFKDSANDAYFLKERCESLGIQVELHPFLVSDYMNRSIDQHADIIFMGEVFAADH
ELAFLNVFKNKSCFVSRFMDPHYEKQINCLLDTFLLEVNKEKRYELMYEIEEFLQTEHIILFNYHVLKRKTYPSSLKNVT
IDSFGWANFAKLWIQPSMS

Sequences:

>Translated_579_residues
MKIMDYYIRLRLHAQDQQHMRNSLQELADVLYCSTKNVKILLKKMSEEQLISWTPGRGRGNKTEILFSHNFVEAIESYTD
ELLAQEKLKDIFLLLKEPLPLALQKKIENKLHHHFGYEPSNDMYDILKIPISRKIFPLDPAFVAVTTESHLTSQIFDTLV
IYNDVTEKMEPHIAHTWELSEDGLTWTFYLRKDVHFHNETVLTSKDVQFSFERLKEVHSPFEWLTEEIVQIETPSPLQIR
FHLAKPNLFFLHYVSSIQLAILPREVSIENHHYIGTGPFKLTHYSEDNIVLEAFSHYFKERALLDRIEFWSIPDHVQIDA
DYELPNEEENERHDIQIEEIGCIYAGFNFTKPGPHHDIYFRKAWRELYDVETILRSIEGRRTIAASSFFPERSRQASKRS
YSLEKAKEYLKKSTYNGETIHIYFFAFKDSANDAYFLKERCESLGIQVELHPFLVSDYMNRSIDQHADIIFMGEVFAADH
ELAFLNVFKNKSCFVSRFMDPHYEKQINCLLDTFLLEVNKEKRYELMYEIEEFLQTEHIILFNYHVLKRKTYPSSLKNVT
IDSFGWANFAKLWIQPSMS
>Mature_579_residues
MKIMDYYIRLRLHAQDQQHMRNSLQELADVLYCSTKNVKILLKKMSEEQLISWTPGRGRGNKTEILFSHNFVEAIESYTD
ELLAQEKLKDIFLLLKEPLPLALQKKIENKLHHHFGYEPSNDMYDILKIPISRKIFPLDPAFVAVTTESHLTSQIFDTLV
IYNDVTEKMEPHIAHTWELSEDGLTWTFYLRKDVHFHNETVLTSKDVQFSFERLKEVHSPFEWLTEEIVQIETPSPLQIR
FHLAKPNLFFLHYVSSIQLAILPREVSIENHHYIGTGPFKLTHYSEDNIVLEAFSHYFKERALLDRIEFWSIPDHVQIDA
DYELPNEEENERHDIQIEEIGCIYAGFNFTKPGPHHDIYFRKAWRELYDVETILRSIEGRRTIAASSFFPERSRQASKRS
YSLEKAKEYLKKSTYNGETIHIYFFAFKDSANDAYFLKERCESLGIQVELHPFLVSDYMNRSIDQHADIIFMGEVFAADH
ELAFLNVFKNKSCFVSRFMDPHYEKQINCLLDTFLLEVNKEKRYELMYEIEEFLQTEHIILFNYHVLKRKTYPSSLKNVT
IDSFGWANFAKLWIQPSMS

Specific function: Unknown

COG id: COG4533

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786256, Length=351, Percent_Identity=26.7806267806268, Blast_Score=139, Evalue=7e-34,
Organism=Escherichia coli, GI1786650, Length=570, Percent_Identity=23.6842105263158, Blast_Score=135, Evalue=1e-32,
Organism=Escherichia coli, GI1789966, Length=390, Percent_Identity=23.0769230769231, Blast_Score=97, Evalue=4e-21,
Organism=Escherichia coli, GI1787551, Length=483, Percent_Identity=20.4968944099379, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 68547; Mature: 68547

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIMDYYIRLRLHAQDQQHMRNSLQELADVLYCSTKNVKILLKKMSEEQLISWTPGRGRG
CCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCCC
NKTEILFSHNFVEAIESYTDELLAQEKLKDIFLLLKEPLPLALQKKIENKLHHHFGYEPS
CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC
NDMYDILKIPISRKIFPLDPAFVAVTTESHLTSQIFDTLVIYNDVTEKMEPHIAHTWELS
CCCHHHHCCCCCCCEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
EDGLTWTFYLRKDVHFHNETVLTSKDVQFSFERLKEVHSPFEWLTEEIVQIETPSPLQIR
CCCCEEEEEEEEECEECCCEEEECCCHHHHHHHHHHHHCHHHHHHHHHEECCCCCCEEEE
FHLAKPNLFFLHYVSSIQLAILPREVSIENHHYIGTGPFKLTHYSEDNIVLEAFSHYFKE
EEEECCCEEEEEECCCEEEEEEECEECCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHH
RALLDRIEFWSIPDHVQIDADYELPNEEENERHDIQIEEIGCIYAGFNFTKPGPHHDIYF
HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHH
RKAWRELYDVETILRSIEGRRTIAASSFFPERSRQASKRSYSLEKAKEYLKKSTYNGETI
HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCEE
HIYFFAFKDSANDAYFLKERCESLGIQVELHPFLVSDYMNRSIDQHADIIFMGEVFAADH
EEEEEEEECCCCCHHHHHHHHHHCCCEEEECHHHHHHHHHCCHHHCCCEEEEECHHHCCC
ELAFLNVFKNKSCFVSRFMDPHYEKQINCLLDTFLLEVNKEKRYELMYEIEEFLQTEHII
CEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEE
LFNYHVLKRKTYPSSLKNVTIDSFGWANFAKLWIQPSMS
EEEEEEEECCCCCCHHCCCEECCCCCCCEEHEEEECCCC
>Mature Secondary Structure
MKIMDYYIRLRLHAQDQQHMRNSLQELADVLYCSTKNVKILLKKMSEEQLISWTPGRGRG
CCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCCC
NKTEILFSHNFVEAIESYTDELLAQEKLKDIFLLLKEPLPLALQKKIENKLHHHFGYEPS
CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC
NDMYDILKIPISRKIFPLDPAFVAVTTESHLTSQIFDTLVIYNDVTEKMEPHIAHTWELS
CCCHHHHCCCCCCCEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
EDGLTWTFYLRKDVHFHNETVLTSKDVQFSFERLKEVHSPFEWLTEEIVQIETPSPLQIR
CCCCEEEEEEEEECEECCCEEEECCCHHHHHHHHHHHHCHHHHHHHHHEECCCCCCEEEE
FHLAKPNLFFLHYVSSIQLAILPREVSIENHHYIGTGPFKLTHYSEDNIVLEAFSHYFKE
EEEECCCEEEEEECCCEEEEEEECEECCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHH
RALLDRIEFWSIPDHVQIDADYELPNEEENERHDIQIEEIGCIYAGFNFTKPGPHHDIYF
HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHH
RKAWRELYDVETILRSIEGRRTIAASSFFPERSRQASKRSYSLEKAKEYLKKSTYNGETI
HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCEE
HIYFFAFKDSANDAYFLKERCESLGIQVELHPFLVSDYMNRSIDQHADIIFMGEVFAADH
EEEEEEEECCCCCHHHHHHHHHHCCCEEEECHHHHHHHHHCCHHHCCCEEEEECHHHCCC
ELAFLNVFKNKSCFVSRFMDPHYEKQINCLLDTFLLEVNKEKRYELMYEIEEFLQTEHII
CEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEE
LFNYHVLKRKTYPSSLKNVTIDSFGWANFAKLWIQPSMS
EEEEEEEECCCCCCHHCCCEECCCCCCCEEHEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]