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The map label for this gene is 218901996

Identifier: 218901996

GI number: 218901996

Start: 838434

End: 839630

Strand: Reverse

Name: 218901996

Synonym: BCAH820_0878

Alternate gene names: NA

Gene position: 839630-838434 (Counterclockwise)

Preceding gene: 218901998

Following gene: 218901995

Centisome position: 15.83

GC content: 34.73

Gene sequence:

>1197_bases
ATGGAGCAAAACCCATCTTTGCAAGAAAATACACGCAGTAAACCGAAAAAAAGTAAGAAAAAAATAAAAATTATTATAAG
CGTTATTCTATTCTTTTTAATAGTAGGTGGCGGTTATACTTGGTTTTTAGTAAATAAAGCATCTTCTGCTGTTCGAAATG
CCGCACACGATTTAGCACGCGGTGATAAATCTGATTTACGTGATAAAGCTGTAAAACCTATTACAAACAATGTCTCTGTC
TTAGTAATGGGTGTTGATGAAAGCGATGTCCGAGGAAAAGAATATGGTGAAGCTATAAGAACGGACGCACTATTGCTTGC
AACGTTTAATAAAGATAGCAAAACTGTAAAACTATTAAGTATTCCACGAGATACATATACGTATATTCCAGTGGAAAAGA
AAAAAGATAAAATTACACACGCTCATGCATATGGTTCTACTAAAAACGGAAAAGATGGTGGACCACAAGCGAGTATTGAT
GCAGTTGAAAAATTACTAAATGTTCCTGTTGATTACTTTGTAAAGTTTAACTTCAAATCATTTATGAAAATTGTCGACGA
TTTAGGCGGTATTGAAGTTGATGTACCAGTTGAATTTACTGAACAAGATAGTAATGATAACGCTGATGCAATTCACCTGA
AGAAAGGCGTTCAAAAACTAAATAGTGAAGAAGCTCTTGCTCTTGCTAGAACGCGCCACATCGATAGTGATGCAATGCGT
GGACAACGCCAACAGCTCGTTATTGAAGCMATTTTAGAGAAACTAACAAGCGTTGGATCTGTAACAAAAGTTGGTAATAT
CATTGATGATATTAACGGACAATTCGTTACAAACTTAACATTTGATGATATGCTTTCATTCTATAAATATGGGGCGGATT
CTTCAATTGAGAAATTACAAATCCAAGGTGACGACTGCTATATGGAAAAAGGTGACGATACATGTASCAAATCTGCTGGT
GGCGGCCGAACATATTTCTACAACCCAGATAAAAAAGAATTAGCAAAAGTTACAAATGATCTTCGTACTCATCTTGGATT
ACCTGCATATACAAAAACAGACTCTGATTCGAAAAAAACAAGTACAGAGAAAACAAAAGAATCTAAGTCTGAAAATTCAA
GTGAACGCGAATCAAGTAACAATGAATCAAAAAATAGCAATGAAGACAAAGAAACATCGTCTAACGACAATGAATAA

Upstream 100 bases:

>100_bases
TACGAAATGTAAATGTTTTGTAATGTTTTTTTTCGCTAAATTTCATTATAATAAGTGGATATGAGTGTCGTATTTCAATC
CAAATGAAGGAGTACAGGAA

Downstream 100 bases:

>100_bases
TAAAGAAGCAGTTCTCTATGGAGGTAGAGTACTGCTTCTTTTTATTTCTTCACAATTAAAAATCAGAACTTTCTAACTAT
CTTTTTTAATATTTTTAAAT

Product: transcription antiterminator, LytR family

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MEQNPSLQENTRSKPKKSKKKIKIIISVILFFLIVGGGYTWFLVNKASSAVRNAAHDLARGDKSDLRDKAVKPITNNVSV
LVMGVDESDVRGKEYGEAIRTDALLLATFNKDSKTVKLLSIPRDTYTYIPVEKKKDKITHAHAYGSTKNGKDGGPQASID
AVEKLLNVPVDYFVKFNFKSFMKIVDDLGGIEVDVPVEFTEQDSNDNADAIHLKKGVQKLNSEEALALARTRHIDSDAMR
GQRQQLVIEAILEKLTSVGSVTKVGNIIDDINGQFVTNLTFDDMLSFYKYGADSSIEKLQIQGDDCYMEKGDDTCXKSAG
GGRTYFYNPDKKELAKVTNDLRTHLGLPAYTKTDSDSKKTSTEKTKESKSENSSERESSNNESKNSNEDKETSSNDNE

Sequences:

>Translated_398_residues
MEQNPSLQENTRSKPKKSKKKIKIIISVILFFLIVGGGYTWFLVNKASSAVRNAAHDLARGDKSDLRDKAVKPITNNVSV
LVMGVDESDVRGKEYGEAIRTDALLLATFNKDSKTVKLLSIPRDTYTYIPVEKKKDKITHAHAYGSTKNGKDGGPQASID
AVEKLLNVPVDYFVKFNFKSFMKIVDDLGGIEVDVPVEFTEQDSNDNADAIHLKKGVQKLNSEEALALARTRHIDSDAMR
GQRQQLVIEAILEKLTSVGSVTKVGNIIDDINGQFVTNLTFDDMLSFYKYGADSSIEKLQIQGDDCYMEKGDDTCXKSAG
GGRTYFYNPDKKELAKVTNDLRTHLGLPAYTKTDSDSKKTSTEKTKESKSENSSERESSNNESKNSNEDKETSSNDNE
>Mature_398_residues
MEQNPSLQENTRSKPKKSKKKIKIIISVILFFLIVGGGYTWFLVNKASSAVRNAAHDLARGDKSDLRDKAVKPITNNVSV
LVMGVDESDVRGKEYGEAIRTDALLLATFNKDSKTVKLLSIPRDTYTYIPVEKKKDKITHAHAYGSTKNGKDGGPQASID
AVEKLLNVPVDYFVKFNFKSFMKIVDDLGGIEVDVPVEFTEQDSNDNADAIHLKKGVQKLNSEEALALARTRHIDSDAMR
GQRQQLVIEAILEKLTSVGSVTKVGNIIDDINGQFVTNLTFDDMLSFYKYGADSSIEKLQIQGDDCYMEKGDDTCXKSAG
GGRTYFYNPDKKELAKVTNDLRTHLGLPAYTKTDSDSKKTSTEKTKESKSENSSERESSNNESKNSNEDKETSSNDNE

Specific function: Unknown

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 44094; Mature: 44094

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQNPSLQENTRSKPKKSKKKIKIIISVILFFLIVGGGYTWFLVNKASSAVRNAAHDLAR
CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHC
GDKSDLRDKAVKPITNNVSVLVMGVDESDVRGKEYGEAIRTDALLLATFNKDSKTVKLLS
CCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCEEEEEEECCCCCEEEEEE
IPRDTYTYIPVEKKKDKITHAHAYGSTKNGKDGGPQASIDAVEKLLNVPVDYFVKFNFKS
CCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHEEEECHHH
FMKIVDDLGGIEVDVPVEFTEQDSNDNADAIHLKKGVQKLNSEEALALARTRHIDSDAMR
HHHHHHHCCCEEEEECEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHC
GQRQQLVIEAILEKLTSVGSVTKVGNIIDDINGQFVTNLTFDDMLSFYKYGADSSIEKLQ
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCEEEE
IQGDDCYMEKGDDTCXKSAGGGRTYFYNPDKKELAKVTNDLRTHLGLPAYTKTDSDSKKT
ECCCCEEEECCCCHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
STEKTKESKSENSSERESSNNESKNSNEDKETSSNDNE
HHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEQNPSLQENTRSKPKKSKKKIKIIISVILFFLIVGGGYTWFLVNKASSAVRNAAHDLAR
CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHC
GDKSDLRDKAVKPITNNVSVLVMGVDESDVRGKEYGEAIRTDALLLATFNKDSKTVKLLS
CCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCEEEEEEECCCCCEEEEEE
IPRDTYTYIPVEKKKDKITHAHAYGSTKNGKDGGPQASIDAVEKLLNVPVDYFVKFNFKS
CCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHEEEECHHH
FMKIVDDLGGIEVDVPVEFTEQDSNDNADAIHLKKGVQKLNSEEALALARTRHIDSDAMR
HHHHHHHCCCEEEEECEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHC
GQRQQLVIEAILEKLTSVGSVTKVGNIIDDINGQFVTNLTFDDMLSFYKYGADSSIEKLQ
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCEEEE
IQGDDCYMEKGDDTCXKSAGGGRTYFYNPDKKELAKVTNDLRTHLGLPAYTKTDSDSKKT
ECCCCEEEECCCCHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
STEKTKESKSENSSERESSNNESKNSNEDKETSSNDNE
HHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7816834 [H]