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The map label for this gene is gerLC1 [H]

Identifier: 218901904

GI number: 218901904

Start: 744087

End: 745229

Strand: Direct

Name: gerLC1 [H]

Synonym: BCAH820_0765

Alternate gene names: 218901904

Gene position: 744087-745229 (Clockwise)

Preceding gene: 218901903

Following gene: 218901905

Centisome position: 14.03

GC content: 35.08

Gene sequence:

>1143_bases
ATGGTTATGGTTTTAGCTGGATCTATAAGTGGGTGCTCTGAATTAGAAGAAATAGAAGAAAGAGGATTTGTAGTAGGCGC
AGCTTACGATATTGTGAAGAAAAAGAAATCAAATCCGATTATGAAAGGGACGTATCAGATGGTACTTCCCAGTAAGTTAG
CACAACAAGGTGGACAGGGCGATGGAGATAGTGAAAATTATATTAACGTAAGTGCGAAAGCAGATAGCGTCTTTGAGCAA
ATAAGAATAATTGCTAAAAAAATTAGTCGAACATTATTTTTTCCGCATATACAAGTCATTATTTTTTCGGATGAATTACT
AGCGAATCCGTATGTTTTGCAAAATACGTTAGATGTATATTTTCGTGACCATGAAATGAGAAGAAATATTCGTTTGTTCG
TTTCCAAGAAAAATGCAGAATCTATTTTAAAACAGAGTGCAAAACCTGAAAACTTACCGGCGCAGTACATTGATATGTTA
GCTGAGCATCCTCCGAAAAACGCTCAAATGATTGAGGCGGCGAGAATTGGTGAAGTGCAAGGGAAAATGATCGCAGATCG
AAGTTTTGCATTACCTCTCTTAGGATTAACTAAACAAGGCGTACAAATGGAAGGAGCGGCATTGATCCGTGGAAAGGATA
ATAAGTGCGTTGGAACTTTGAGTGGAGAACAAACATTAGGAATGAACTATGTAATAGGTAAAAAAATTGGAGGTTTCTTT
ACTGTTCGTAAAAAGAATCAGCTCATTACATATGAAATTCATAAGTTGCGCCGAAAGATCCAAGTGTCTACTGAAAATGC
TACAAAACCGAAGTTTGATATTCATTTGTCCACAGAAGGCATATTAGCTGAATTACATTTTAATGAACCGAAACAAGTGA
TGAATGAAAAGTTTTTAAAGAAAGAGATTTCAAAGGAAATGAAGAAGCGTATTGAAAAGTCTATACAGCTTGTTCAAAAA
AAATATAAGGTAGATGTATTGGAATTAGGAGAGGTATATAAGAGGCATAATTATAAAGAGTGGAAGAAAATTAGTAAGGA
TTGGGATCAAGGCCAGAATTATTTTAGTAATGCTGAAATTAATGTTCACGTTGATCCAACAATTGAACATTCAGGTTCAG
CATTACCAAAGAAAGTGAAGTAA

Upstream 100 bases:

>100_bases
ATAGATATGGGGTTTGTCGTATTAGCTCCTTTGCTAGTTTTTATTGTATATAAAATAAAAAGAAGGAATGGTAGAAATGA
AACACCTTCTTAAAATTATA

Downstream 100 bases:

>100_bases
GGTGATGGAAGTTGTTTACTGGATTAGGAATTAGTTGCACAATATTAATAGCGATTCTTCCAGGAGCCATATACTTTATT
CATAAGAAACTCACAACGTA

Product: spore germination protein GerLC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MVMVLAGSISGCSELEEIEERGFVVGAAYDIVKKKKSNPIMKGTYQMVLPSKLAQQGGQGDGDSENYINVSAKADSVFEQ
IRIIAKKISRTLFFPHIQVIIFSDELLANPYVLQNTLDVYFRDHEMRRNIRLFVSKKNAESILKQSAKPENLPAQYIDML
AEHPPKNAQMIEAARIGEVQGKMIADRSFALPLLGLTKQGVQMEGAALIRGKDNKCVGTLSGEQTLGMNYVIGKKIGGFF
TVRKKNQLITYEIHKLRRKIQVSTENATKPKFDIHLSTEGILAELHFNEPKQVMNEKFLKKEISKEMKKRIEKSIQLVQK
KYKVDVLELGEVYKRHNYKEWKKISKDWDQGQNYFSNAEINVHVDPTIEHSGSALPKKVK

Sequences:

>Translated_380_residues
MVMVLAGSISGCSELEEIEERGFVVGAAYDIVKKKKSNPIMKGTYQMVLPSKLAQQGGQGDGDSENYINVSAKADSVFEQ
IRIIAKKISRTLFFPHIQVIIFSDELLANPYVLQNTLDVYFRDHEMRRNIRLFVSKKNAESILKQSAKPENLPAQYIDML
AEHPPKNAQMIEAARIGEVQGKMIADRSFALPLLGLTKQGVQMEGAALIRGKDNKCVGTLSGEQTLGMNYVIGKKIGGFF
TVRKKNQLITYEIHKLRRKIQVSTENATKPKFDIHLSTEGILAELHFNEPKQVMNEKFLKKEISKEMKKRIEKSIQLVQK
KYKVDVLELGEVYKRHNYKEWKKISKDWDQGQNYFSNAEINVHVDPTIEHSGSALPKKVK
>Mature_380_residues
MVMVLAGSISGCSELEEIEERGFVVGAAYDIVKKKKSNPIMKGTYQMVLPSKLAQQGGQGDGDSENYINVSAKADSVFEQ
IRIIAKKISRTLFFPHIQVIIFSDELLANPYVLQNTLDVYFRDHEMRRNIRLFVSKKNAESILKQSAKPENLPAQYIDML
AEHPPKNAQMIEAARIGEVQGKMIADRSFALPLLGLTKQGVQMEGAALIRGKDNKCVGTLSGEQTLGMNYVIGKKIGGFF
TVRKKNQLITYEIHKLRRKIQVSTENATKPKFDIHLSTEGILAELHFNEPKQVMNEKFLKKEISKEMKKRIEKSIQLVQK
KYKVDVLELGEVYKRHNYKEWKKISKDWDQGQNYFSNAEINVHVDPTIEHSGSALPKKVK

Specific function: May be involved in spore germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKC lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008844 [H]

Pfam domain/function: PF05504 Spore_GerAC [H]

EC number: NA

Molecular weight: Translated: 43127; Mature: 43127

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMVLAGSISGCSELEEIEERGFVVGAAYDIVKKKKSNPIMKGTYQMVLPSKLAQQGGQG
CEEEEECCCCCHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCCCHHHHHCCHHHHHCCCCC
DGDSENYINVSAKADSVFEQIRIIAKKISRTLFFPHIQVIIFSDELLANPYVLQNTLDVY
CCCCCCEEEEECHHHHHHHHHHHHHHHHHHHEECCEEEEEEEECHHHCCCCHHHHHHHHE
FRDHEMRRNIRLFVSKKNAESILKQSAKPENLPAQYIDMLAEHPPKNAQMIEAARIGEVQ
ECCHHHCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCHHC
GKMIADRSFALPLLGLTKQGVQMEGAALIRGKDNKCVGTLSGEQTLGMNYVIGKKIGGFF
CCEEECCCCCCCHHCCCCCCCEECCEEEEECCCCCEEEECCCCCCCCCEEEECCCCCCEE
TVRKKNQLITYEIHKLRRKIQVSTENATKPKFDIHLSTEGILAELHFNEPKQVMNEKFLK
EEECCCCEEHHHHHHHHHHEEECCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHH
KEISKEMKKRIEKSIQLVQKKYKVDVLELGEVYKRHNYKEWKKISKDWDQGQNYFSNAEI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEE
NVHVDPTIEHSGSALPKKVK
EEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVMVLAGSISGCSELEEIEERGFVVGAAYDIVKKKKSNPIMKGTYQMVLPSKLAQQGGQG
CEEEEECCCCCHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCCCHHHHHCCHHHHHCCCCC
DGDSENYINVSAKADSVFEQIRIIAKKISRTLFFPHIQVIIFSDELLANPYVLQNTLDVY
CCCCCCEEEEECHHHHHHHHHHHHHHHHHHHEECCEEEEEEEECHHHCCCCHHHHHHHHE
FRDHEMRRNIRLFVSKKNAESILKQSAKPENLPAQYIDMLAEHPPKNAQMIEAARIGEVQ
ECCHHHCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCHHC
GKMIADRSFALPLLGLTKQGVQMEGAALIRGKDNKCVGTLSGEQTLGMNYVIGKKIGGFF
CCEEECCCCCCCHHCCCCCCCEECCEEEEECCCCCEEEECCCCCCCCCEEEECCCCCCEE
TVRKKNQLITYEIHKLRRKIQVSTENATKPKFDIHLSTEGILAELHFNEPKQVMNEKFLK
EEECCCCEEHHHHHHHHHHEEECCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHH
KEISKEMKKRIEKSIQLVQKKYKVDVLELGEVYKRHNYKEWKKISKDWDQGQNYFSNAEI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEE
NVHVDPTIEHSGSALPKKVK
EEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]