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The map label for this gene is gerLA [H]

Identifier: 218901902

GI number: 218901902

Start: 741485

End: 742954

Strand: Direct

Name: gerLA [H]

Synonym: BCAH820_0763

Alternate gene names: 218901902

Gene position: 741485-742954 (Clockwise)

Preceding gene: 218901901

Following gene: 218901903

Centisome position: 13.98

GC content: 36.67

Gene sequence:

>1470_bases
TTGATAGAGCTAAAAGGTAACTTATTTGAAGTTATGAAAGAAATTAGGGATGAGTTAGGTTCGCCTAATGATTTAACAAT
TAGGGAAGTTGCCCTTGCTGGTAGTTTTACACGCTGTGCTGTTGTTTTTTTATGTGGGTTAACAGATAAGGATAATGTTT
ATAAATATGTCGTTCGTACACTTCAATATGAAGAAATACAAAAAGACGAAGCTGTTGTTCAAACATTATTGGATCGCTTT
ATTTCTATTGCAGAAGTAGGTAAGAAGACAACGTTTCCCGATATTATAAATGCGATTTTAGCGGGAGATACAGTTATATT
AATTGATAATATTCAAACTGCTATCGTAATTAATAGTAGAGCTTGGGAAAAAAGAAGTTTAGAACCGCCAGTAACAGAAG
ATTTAATACGTGGACCGAGGGTCGGATTAAATGAAGATATTAACGTAAATAAAATGTTAATTCGCCGTAGTTTACGTGAC
CCAAAGCTGAGATTTCAATCTTATATTATGGGAAAGAGATCCCAAAAAGAAGTGACTTTAGTATATATAGAAGACATTAT
CAATCCTTACATTGTAAAAGAGCTAGATCGGCGTCTTCAATCCATAGTGACAGATGTCGTTTTTGAGACGGGTACAATTG
AGCAACTAATTCAAGATAATAATTTGTCACCATTTCCGCAGTTTTTGAATACGGAAAGGCCTGATAATATTGTGGCCTCA
TTAGCGAAAGGAAAGGCAGCTATTTTAGTGGATGGATCACCTTTTGCCCTTATAGCTCCGCTAGTATTTGTTGATATTTT
TCAATCTGTGGAAGATCACTATGAGCGTTGGGTAATAGGGACTTTATTAAGAATTTTGCGGATGGGTTCTGGTATAGTTG
CAATTTTAATGCCGGCGATGTATGTAGCGCTCGTCTCATATCACCAAGGACTTATTCCTTCTAAATTGGCTTATTCGATT
GCTGGAGCAAGAGAAGGTGTTCCTTTTCCTGCCTATATTGAAACGTTAATGATGGCATTAACGATGGAGTTAATACGAGA
AGCAGGAATTAGGTTGCCGAAACCGATGGGACAAACAATTGGGATTGTAGGTGGTCTTGTAATTGGAGAGGCAGCGGTGA
ATGCAGGAATTGTAAATCCATTTTTAGTTATCATTATTGCGGTTACAGCTATTGCTACATTTTCACTTCCAGTGTATAGC
ATCACAATTACGTTTCGGATTTTACTTTTCGTCTTTGTGTTAGCAGCAACGGCTTTTGGGTTGTATGGAATCATTCTAGC
TCTTATTGCACTTGCTGTTCATATTACAAATTTAACAAGTGTTGGTGTACCGTATACAACTCCAATTGCTCCTGCATTTT
ATAAAGATTGGAAAGAAGAGTTTATTCGCATGCCAAAATCAATGTTGAAAGAGAGACCGGAATATTTACAAACGAAAGAT
TCTACAGTACGTCCAAAGGAGCGAGAATAA

Upstream 100 bases:

>100_bases
AGAGCTATCGTTGAAAAGAGATAGCTCTTTTTTGTATATATTTTCTTCTATTAGCGGAATCTAACTAAAAACTTGTTGAA
AAGGAAGTTAGGTGGGGGAC

Downstream 100 bases:

>100_bases
TTGAAACCATTTGAGTATGGCGATGAAGAAATTGGATCTCGGGAAATTGGGTTTGCGGTATCATCGACCATTATTGGTAT
AGGCGCATTATCTATGCCAA

Product: spore germination protein GerLA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MIELKGNLFEVMKEIRDELGSPNDLTIREVALAGSFTRCAVVFLCGLTDKDNVYKYVVRTLQYEEIQKDEAVVQTLLDRF
ISIAEVGKKTTFPDIINAILAGDTVILIDNIQTAIVINSRAWEKRSLEPPVTEDLIRGPRVGLNEDINVNKMLIRRSLRD
PKLRFQSYIMGKRSQKEVTLVYIEDIINPYIVKELDRRLQSIVTDVVFETGTIEQLIQDNNLSPFPQFLNTERPDNIVAS
LAKGKAAILVDGSPFALIAPLVFVDIFQSVEDHYERWVIGTLLRILRMGSGIVAILMPAMYVALVSYHQGLIPSKLAYSI
AGAREGVPFPAYIETLMMALTMELIREAGIRLPKPMGQTIGIVGGLVIGEAAVNAGIVNPFLVIIIAVTAIATFSLPVYS
ITITFRILLFVFVLAATAFGLYGIILALIALAVHITNLTSVGVPYTTPIAPAFYKDWKEEFIRMPKSMLKERPEYLQTKD
STVRPKERE

Sequences:

>Translated_489_residues
MIELKGNLFEVMKEIRDELGSPNDLTIREVALAGSFTRCAVVFLCGLTDKDNVYKYVVRTLQYEEIQKDEAVVQTLLDRF
ISIAEVGKKTTFPDIINAILAGDTVILIDNIQTAIVINSRAWEKRSLEPPVTEDLIRGPRVGLNEDINVNKMLIRRSLRD
PKLRFQSYIMGKRSQKEVTLVYIEDIINPYIVKELDRRLQSIVTDVVFETGTIEQLIQDNNLSPFPQFLNTERPDNIVAS
LAKGKAAILVDGSPFALIAPLVFVDIFQSVEDHYERWVIGTLLRILRMGSGIVAILMPAMYVALVSYHQGLIPSKLAYSI
AGAREGVPFPAYIETLMMALTMELIREAGIRLPKPMGQTIGIVGGLVIGEAAVNAGIVNPFLVIIIAVTAIATFSLPVYS
ITITFRILLFVFVLAATAFGLYGIILALIALAVHITNLTSVGVPYTTPIAPAFYKDWKEEFIRMPKSMLKERPEYLQTKD
STVRPKERE
>Mature_489_residues
MIELKGNLFEVMKEIRDELGSPNDLTIREVALAGSFTRCAVVFLCGLTDKDNVYKYVVRTLQYEEIQKDEAVVQTLLDRF
ISIAEVGKKTTFPDIINAILAGDTVILIDNIQTAIVINSRAWEKRSLEPPVTEDLIRGPRVGLNEDINVNKMLIRRSLRD
PKLRFQSYIMGKRSQKEVTLVYIEDIINPYIVKELDRRLQSIVTDVVFETGTIEQLIQDNNLSPFPQFLNTERPDNIVAS
LAKGKAAILVDGSPFALIAPLVFVDIFQSVEDHYERWVIGTLLRILRMGSGIVAILMPAMYVALVSYHQGLIPSKLAYSI
AGAREGVPFPAYIETLMMALTMELIREAGIRLPKPMGQTIGIVGGLVIGEAAVNAGIVNPFLVIIIAVTAIATFSLPVYS
ITITFRILLFVFVLAATAFGLYGIILALIALAVHITNLTSVGVPYTTPIAPAFYKDWKEEFIRMPKSMLKERPEYLQTKD
STVRPKERE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 54563; Mature: 54563

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELKGNLFEVMKEIRDELGSPNDLTIREVALAGSFTRCAVVFLCGLTDKDNVYKYVVRT
CEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHH
LQYEEIQKDEAVVQTLLDRFISIAEVGKKTTFPDIINAILAGDTVILIDNIQTAIVINSR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECCCEEEEECCC
AWEKRSLEPPVTEDLIRGPRVGLNEDINVNKMLIRRSLRDPKLRFQSYIMGKRSQKEVTL
CCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEE
VYIEDIINPYIVKELDRRLQSIVTDVVFETGTIEQLIQDNNLSPFPQFLNTERPDNIVAS
EEHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHCCCCCHHHHHH
LAKGKAAILVDGSPFALIAPLVFVDIFQSVEDHYERWVIGTLLRILRMGSGIVAILMPAM
HHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YVALVSYHQGLIPSKLAYSIAGAREGVPFPAYIETLMMALTMELIREAGIRLPKPMGQTI
HHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
GIVGGLVIGEAAVNAGIVNPFLVIIIAVTAIATFSLPVYSITITFRILLFVFVLAATAFG
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LYGIILALIALAVHITNLTSVGVPYTTPIAPAFYKDWKEEFIRMPKSMLKERPEYLQTKD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHCCCC
STVRPKERE
CCCCCCCCC
>Mature Secondary Structure
MIELKGNLFEVMKEIRDELGSPNDLTIREVALAGSFTRCAVVFLCGLTDKDNVYKYVVRT
CEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHH
LQYEEIQKDEAVVQTLLDRFISIAEVGKKTTFPDIINAILAGDTVILIDNIQTAIVINSR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECCCEEEEECCC
AWEKRSLEPPVTEDLIRGPRVGLNEDINVNKMLIRRSLRDPKLRFQSYIMGKRSQKEVTL
CCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEE
VYIEDIINPYIVKELDRRLQSIVTDVVFETGTIEQLIQDNNLSPFPQFLNTERPDNIVAS
EEHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHCCCCCHHHHHH
LAKGKAAILVDGSPFALIAPLVFVDIFQSVEDHYERWVIGTLLRILRMGSGIVAILMPAM
HHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YVALVSYHQGLIPSKLAYSIAGAREGVPFPAYIETLMMALTMELIREAGIRLPKPMGQTI
HHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
GIVGGLVIGEAAVNAGIVNPFLVIIIAVTAIATFSLPVYSITITFRILLFVFVLAATAFG
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LYGIILALIALAVHITNLTSVGVPYTTPIAPAFYKDWKEEFIRMPKSMLKERPEYLQTKD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHCCCC
STVRPKERE
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]