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The map label for this gene is yclF [H]

Identifier: 218901808

GI number: 218901808

Start: 641648

End: 643033

Strand: Reverse

Name: yclF [H]

Synonym: BCAH820_0669

Alternate gene names: 218901808

Gene position: 643033-641648 (Counterclockwise)

Preceding gene: 218901809

Following gene: 218901805

Centisome position: 12.13

GC content: 35.19

Gene sequence:

>1386_bases
ATGGATGCAGCTTTAAAATTAGACAAAGCTGGAGAGCAACAATCACCAAAAAAACATCCACCAGGATTATATTTGTTGTT
CTTAACAGAAATGTGGGAAAGATTTAGTTATTATGGAATGCGTGGCCTTTTAGTTCTTTATTTAACGACTGCTGCTGTTA
GTGGCGGGTTAGGATTTGATAAGGCGTTTGCAGTGCAATTATATGGTACTTTTACAGCGGCAGTATATTTCATGCCAATT
ATAGGTGGATGGCTAACGGATCATTATATTACAAGACGTCATGCCATTACTCTCGGCGGAATTATTATGGCAATCGGCAA
CTTTGTACTATTCTCAATGAATACAAAAACAGGACTATTTCTAGGATTAATACTATTAGTTATTGGTAATGGGTTCTTCA
AACCAAATATTTCTACACTGTTAGGTGAATTGTATAGTGAAAATGATTCACGTCGTGACAGTGCATTTACTATYTTCTAT
ATGGGTATTAACGTAGGTGCTTTCTTCGCTCCACTTATTTGTGGATTTTTAGCAGAAGATTTCTTTAAAACAAGCGTTGA
TGGCGTTATGGTTATGGGATATAAATACGGATTCTTAGCAGCTTGTATCGGTATGATTATTGGACAAATTGTTTTCAACT
TATTAGCTCCTCGCTATCTTGGTACAGCAGGAACAACAGTTGTTGGTAAAAAAAACAAAAATCAACCTGCAATYGAAAAG
AAACCTTTAACAAAACAAGAAAAAAACCGCACTTGGGCAATTGTAATTTTAACTTGTTTCGTAGTATTCTTCTGGGCAGG
CTTTGAACAAGCTGGTAGTTCTTTAACACTTTATACAGATAAATTTGTTGATCGTACAATTTTTGGATGGGAAATTCCAA
CATCTTGGTTCCAATCTGTTAATCCAGCGTTCATCGTACTACTTGCACCATTCGTATCTATGCTATGGTTAAAACTTTCT
AAATCAAAGCGTGGCGATTTAAAAATACCAACAAAAATGGCATTTGGTATGATTTTACTAGGTATAGGTTACCTTGTTTT
AACATTAGCGGTTCTAAAAACTGGAAGTAGTGAAGCTGATATAACTGTTAAAGCAAACTTATTATTCATCGTTATCACTT
ATATGTTCCATACAATTGGAGAACTATTCTTATCACCAATCGGTCTATCAATGGTAAGTGCAATTGCACCTGTTAAATTA
GCATCATTATTAATGGGTGTATGGTTAGCAGGTTCAGGTATGGCTAACTGGTTAGCTGGTAAACTGGCTTCCTTTACACA
ATCATTAGGATATCTTGAAGTATTTGCAAGTATCGGTATTATTGTTAGCGTCTTAGGGTTTGTACTTCTTCTCTGCTCTA
AAAAAGTTGCAAGTATGATGGAATAA

Upstream 100 bases:

>100_bases
TTTTCTTTCTATTTCCATATAATTCTATTGACTTCTAAATATTTTGTAAATTAAAATGATTACATAAATATCCGTTATAC
AGGATTAGGGGGAAACAAAA

Downstream 100 bases:

>100_bases
CACAAAAAAGACGCTTCTAAAATTAGAAGCGTCTTTTCTATTACTTCTCCTCTAAAGCCGTCACGTTCACGTGAACGCTT
TCTCCAGGATTAGATACATC

Product: proton/peptide symporter family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MDAALKLDKAGEQQSPKKHPPGLYLLFLTEMWERFSYYGMRGLLVLYLTTAAVSGGLGFDKAFAVQLYGTFTAAVYFMPI
IGGWLTDHYITRRHAITLGGIIMAIGNFVLFSMNTKTGLFLGLILLVIGNGFFKPNISTLLGELYSENDSRRDSAFTIFY
MGINVGAFFAPLICGFLAEDFFKTSVDGVMVMGYKYGFLAACIGMIIGQIVFNLLAPRYLGTAGTTVVGKKNKNQPAIEK
KPLTKQEKNRTWAIVILTCFVVFFWAGFEQAGSSLTLYTDKFVDRTIFGWEIPTSWFQSVNPAFIVLLAPFVSMLWLKLS
KSKRGDLKIPTKMAFGMILLGIGYLVLTLAVLKTGSSEADITVKANLLFIVITYMFHTIGELFLSPIGLSMVSAIAPVKL
ASLLMGVWLAGSGMANWLAGKLASFTQSLGYLEVFASIGIIVSVLGFVLLLCSKKVASMME

Sequences:

>Translated_461_residues
MDAALKLDKAGEQQSPKKHPPGLYLLFLTEMWERFSYYGMRGLLVLYLTTAAVSGGLGFDKAFAVQLYGTFTAAVYFMPI
IGGWLTDHYITRRHAITLGGIIMAIGNFVLFSMNTKTGLFLGLILLVIGNGFFKPNISTLLGELYSENDSRRDSAFTIFY
MGINVGAFFAPLICGFLAEDFFKTSVDGVMVMGYKYGFLAACIGMIIGQIVFNLLAPRYLGTAGTTVVGKKNKNQPAIEK
KPLTKQEKNRTWAIVILTCFVVFFWAGFEQAGSSLTLYTDKFVDRTIFGWEIPTSWFQSVNPAFIVLLAPFVSMLWLKLS
KSKRGDLKIPTKMAFGMILLGIGYLVLTLAVLKTGSSEADITVKANLLFIVITYMFHTIGELFLSPIGLSMVSAIAPVKL
ASLLMGVWLAGSGMANWLAGKLASFTQSLGYLEVFASIGIIVSVLGFVLLLCSKKVASMME
>Mature_461_residues
MDAALKLDKAGEQQSPKKHPPGLYLLFLTEMWERFSYYGMRGLLVLYLTTAAVSGGLGFDKAFAVQLYGTFTAAVYFMPI
IGGWLTDHYITRRHAITLGGIIMAIGNFVLFSMNTKTGLFLGLILLVIGNGFFKPNISTLLGELYSENDSRRDSAFTIFY
MGINVGAFFAPLICGFLAEDFFKTSVDGVMVMGYKYGFLAACIGMIIGQIVFNLLAPRYLGTAGTTVVGKKNKNQPAIEK
KPLTKQEKNRTWAIVILTCFVVFFWAGFEQAGSSLTLYTDKFVDRTIFGWEIPTSWFQSVNPAFIVLLAPFVSMLWLKLS
KSKRGDLKIPTKMAFGMILLGIGYLVLTLAVLKTGSSEADITVKANLLFIVITYMFHTIGELFLSPIGLSMVSAIAPVKL
ASLLMGVWLAGSGMANWLAGKLASFTQSLGYLEVFASIGIIVSVLGFVLLLCSKKVASMME

Specific function: Unknown

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family [H]

Homologues:

Organism=Homo sapiens, GI4827008, Length=375, Percent_Identity=25.6, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI226371746, Length=359, Percent_Identity=24.5125348189415, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI226371748, Length=350, Percent_Identity=23.7142857142857, Blast_Score=80, Evalue=4e-15,
Organism=Escherichia coli, GI1790572, Length=461, Percent_Identity=32.3210412147505, Blast_Score=213, Evalue=3e-56,
Organism=Escherichia coli, GI1786927, Length=479, Percent_Identity=30.2713987473904, Blast_Score=209, Evalue=3e-55,
Organism=Escherichia coli, GI1787922, Length=485, Percent_Identity=29.6907216494845, Blast_Score=196, Evalue=3e-51,
Organism=Escherichia coli, GI1789911, Length=474, Percent_Identity=29.535864978903, Blast_Score=183, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI71987453, Length=384, Percent_Identity=24.21875, Blast_Score=91, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17541704, Length=386, Percent_Identity=27.2020725388601, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17569141, Length=205, Percent_Identity=30.2439024390244, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI28571102, Length=391, Percent_Identity=25.5754475703325, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI28571100, Length=391, Percent_Identity=25.5754475703325, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24639585, Length=328, Percent_Identity=27.4390243902439, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28571098, Length=370, Percent_Identity=26.2162162162162, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24639581, Length=338, Percent_Identity=26.9230769230769, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24639583, Length=328, Percent_Identity=27.4390243902439, Blast_Score=100, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR000109
- InterPro:   IPR005279
- InterPro:   IPR018456 [H]

Pfam domain/function: PF00854 PTR2 [H]

EC number: NA

Molecular weight: Translated: 50523; Mature: 50523

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS50850 MFS ; PS01023 PTR2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAALKLDKAGEQQSPKKHPPGLYLLFLTEMWERFSYYGMRGLLVLYLTTAAVSGGLGFD
CCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
KAFAVQLYGTFTAAVYFMPIIGGWLTDHYITRRHAITLGGIIMAIGNFVLFSMNTKTGLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHH
LGLILLVIGNGFFKPNISTLLGELYSENDSRRDSAFTIFYMGINVGAFFAPLICGFLAED
HHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
FFKTSVDGVMVMGYKYGFLAACIGMIIGQIVFNLLAPRYLGTAGTTVVGKKNKNQPAIEK
HHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCC
KPLTKQEKNRTWAIVILTCFVVFFWAGFEQAGSSLTLYTDKFVDRTIFGWEIPTSWFQSV
CCCCCHHCCCCHHHHHHHHHHHHHHHCHHHHCCEEEEEEHHHHHHCEECCCCCHHHHHCC
NPAFIVLLAPFVSMLWLKLSKSKRGDLKIPTKMAFGMILLGIGYLVLTLAVLKTGSSEAD
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ITVKANLLFIVITYMFHTIGELFLSPIGLSMVSAIAPVKLASLLMGVWLAGSGMANWLAG
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KLASFTQSLGYLEVFASIGIIVSVLGFVLLLCSKKVASMME
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDAALKLDKAGEQQSPKKHPPGLYLLFLTEMWERFSYYGMRGLLVLYLTTAAVSGGLGFD
CCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
KAFAVQLYGTFTAAVYFMPIIGGWLTDHYITRRHAITLGGIIMAIGNFVLFSMNTKTGLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHH
LGLILLVIGNGFFKPNISTLLGELYSENDSRRDSAFTIFYMGINVGAFFAPLICGFLAED
HHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
FFKTSVDGVMVMGYKYGFLAACIGMIIGQIVFNLLAPRYLGTAGTTVVGKKNKNQPAIEK
HHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCC
KPLTKQEKNRTWAIVILTCFVVFFWAGFEQAGSSLTLYTDKFVDRTIFGWEIPTSWFQSV
CCCCCHHCCCCHHHHHHHHHHHHHHHCHHHHCCEEEEEEHHHHHHCEECCCCCHHHHHCC
NPAFIVLLAPFVSMLWLKLSKSKRGDLKIPTKMAFGMILLGIGYLVLTLAVLKTGSSEAD
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ITVKANLLFIVITYMFHTIGELFLSPIGLSMVSAIAPVKLASLLMGVWLAGSGMANWLAG
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KLASFTQSLGYLEVFASIGIIVSVLGFVLLLCSKKVASMME
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]