| Definition | Bacillus cereus AH820, complete genome. |
|---|---|
| Accession | NC_011773 |
| Length | 5,302,683 |
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The map label for this gene is yhdW [H]
Identifier: 218901787
GI number: 218901787
Start: 615981
End: 617852
Strand: Direct
Name: yhdW [H]
Synonym: BCAH820_0648
Alternate gene names: 218901787
Gene position: 615981-617852 (Clockwise)
Preceding gene: 218901786
Following gene: 218901788
Centisome position: 11.62
GC content: 33.01
Gene sequence:
>1872_bases ATGCAACACCGTAAAAGACTATCTATACCAGGGGTAATGGGACATTCCTTTCAAACAGTTAAATTTGCTTTTTGGAATGT ATTAACCTTTCAACTTGCTTATAAATTATTAGCAGCGATTGTATTCGTCCCGCTATTTGGGATCATTTTTAATAAGTTGT TGTATTTTGGTGGGTATGCAAATGCGACGAATGATGAATTATTAGCGTTTTTAAAGACGCCATACGGCATTTTGGCAATC GTAATTTTATCATTGTTAGCGCTGTTTCTTATCTTTACGGAATTTGCGGTGCTTATTATTATTTCGTACTTTGCTCATAA AAGGCAAAAGGTGAGATTACGTCCAATTTTGTATAAAACAGTAACGTATTTACCTACTCTTTTCACATATTGCTTACCGG GATTTATTTTATATGCTGTCGTATTATTACCTCTTTTAAATATGGGATATGAAACAGCATTAATCCCGCAAATTCAAATT CCTAACTTCATTACAGGAGAACTGTTTAAGACAACGATGGGACAAGTGGGTTATTACACATTCTTTGCTGTAGTTGCGTA TTTGAACCTTCGCTGGATTTTTGTTCTACCTATTGTTGTTTTAGAACAAAAGCCATTTCGTGTGGCAGCACGTAAAAGTG CAAAGTTAGTAAAAGAAAGCTTTTTTAAAGTACTATTCTTTTTAGTAGGATTTTTTATTTCGATAGGAATTGTCTATGTC CTATTTTTAGGAATATATTTATTATGTCTATGGGGTGTTTATGAATTTACAAACCCAAAAGGGACATTTGCATTATTAGC GGAATCAACAATGTCTGTATTTCTAACGAGTACATTGTATTTATTTAGCTTTATCGTGACACCATTTTATATTATGGCGA TTACGAGATTGTATCTACAAAAGGTTCCAGGTGAAGATGTTTTATTAGAAGAAGGATTAGATTATTCGAAAACGAAAGCA GATAAATGTTTCTTCCAAAAACATCGTTGGAAATTTATTGGCGTATATATTGTAGGAATTATTACTGCGGGAATGGTTGT TGCCTTCATTGTGACCTTTATTACAAATACGTATAAAGAACCAATTATTATGGCTCATCGCGGTTATATTTCAAAAGGTG TGGAGAATACGAAAGAAGCTTTGCAGGGCGCTATTGATGCGAAAGCAGACTATGCTGAAATTGATGTACTGCAAACAAAA GACGGTGAATTAGCAGTTATACATGATTTGAAGTTGAAACGCCTTGCTAATGCTAATGTTCAAGTATCAGATTTAACGAT GGACGAGTTAAGACAACTTACTCTGAGTCAAGATGGGTTTTCAGGACAAATAAGTACACTTGATGAGATTATTAAGCTGG CAAAAGGCAAAATCAAACTCAATATTGAAGTGAAGCTTCATGGGGGCGAAAAAGACTTTGTAAATAAAGTATTAAAAACG ATTAAAGATAATGAATTTGAAAAGCAATGTGTCATTCAAACGTTACACTATCCACTTATAAAAGAATTTAAGCGTGCAAA TCCAAATATAAAAGTAGGATATATACTGTATGCAAGTAGAGCTCACTTAAAGAATGTGAAGGCTGATTTTTATGTAGCAG AAGAATACATGCTAAATAAGAAATTAGTAAAAGAAGCAAGGAAGTTAAACAAGCCAATTTATGTATGGACGGTAAATGAT ATGGAAAGTTTAAAGGGATACTATAAATTAAACGTAGATGGTATCATTACCGATTATCCTGAAGATGCACGTGAAACAAT TAAGATGTTAAAAGAGCAAGAAGAGGAAGAAAGTGATCTGTTTGATAAAATTACTGAAACAACAGATGATTTATTTTCCA AGTTATTTATAAGTTATCCAGCTGCTAGCTAA
Upstream 100 bases:
>100_bases AGTGTTCATGTTAAGCGGAATATATTATTATTAAAAAGATGGGTTAGAAATGGAAATATGGAATCCATCTCAAATATCGT TTTAGAATGTGGAGGAATAT
Downstream 100 bases:
>100_bases ATGCTAGCAGCTGTTTTTTATAAAAAGAATATATCTCTAAAGTATTGTGTAAATTAATAACTGTATATGTATACGACATC ATTGGGGTTTCTTACATTGT
Product: glycerophosphoryl diester phosphodiesterase family protein
Products: NA
Alternate protein names: Glycerophosphodiester phosphodiesterase [H]
Number of amino acids: Translated: 623; Mature: 623
Protein sequence:
>623_residues MQHRKRLSIPGVMGHSFQTVKFAFWNVLTFQLAYKLLAAIVFVPLFGIIFNKLLYFGGYANATNDELLAFLKTPYGILAI VILSLLALFLIFTEFAVLIIISYFAHKRQKVRLRPILYKTVTYLPTLFTYCLPGFILYAVVLLPLLNMGYETALIPQIQI PNFITGELFKTTMGQVGYYTFFAVVAYLNLRWIFVLPIVVLEQKPFRVAARKSAKLVKESFFKVLFFLVGFFISIGIVYV LFLGIYLLCLWGVYEFTNPKGTFALLAESTMSVFLTSTLYLFSFIVTPFYIMAITRLYLQKVPGEDVLLEEGLDYSKTKA DKCFFQKHRWKFIGVYIVGIITAGMVVAFIVTFITNTYKEPIIMAHRGYISKGVENTKEALQGAIDAKADYAEIDVLQTK DGELAVIHDLKLKRLANANVQVSDLTMDELRQLTLSQDGFSGQISTLDEIIKLAKGKIKLNIEVKLHGGEKDFVNKVLKT IKDNEFEKQCVIQTLHYPLIKEFKRANPNIKVGYILYASRAHLKNVKADFYVAEEYMLNKKLVKEARKLNKPIYVWTVND MESLKGYYKLNVDGIITDYPEDARETIKMLKEQEEEESDLFDKITETTDDLFSKLFISYPAAS
Sequences:
>Translated_623_residues MQHRKRLSIPGVMGHSFQTVKFAFWNVLTFQLAYKLLAAIVFVPLFGIIFNKLLYFGGYANATNDELLAFLKTPYGILAI VILSLLALFLIFTEFAVLIIISYFAHKRQKVRLRPILYKTVTYLPTLFTYCLPGFILYAVVLLPLLNMGYETALIPQIQI PNFITGELFKTTMGQVGYYTFFAVVAYLNLRWIFVLPIVVLEQKPFRVAARKSAKLVKESFFKVLFFLVGFFISIGIVYV LFLGIYLLCLWGVYEFTNPKGTFALLAESTMSVFLTSTLYLFSFIVTPFYIMAITRLYLQKVPGEDVLLEEGLDYSKTKA DKCFFQKHRWKFIGVYIVGIITAGMVVAFIVTFITNTYKEPIIMAHRGYISKGVENTKEALQGAIDAKADYAEIDVLQTK DGELAVIHDLKLKRLANANVQVSDLTMDELRQLTLSQDGFSGQISTLDEIIKLAKGKIKLNIEVKLHGGEKDFVNKVLKT IKDNEFEKQCVIQTLHYPLIKEFKRANPNIKVGYILYASRAHLKNVKADFYVAEEYMLNKKLVKEARKLNKPIYVWTVND MESLKGYYKLNVDGIITDYPEDARETIKMLKEQEEEESDLFDKITETTDDLFSKLFISYPAAS >Mature_623_residues MQHRKRLSIPGVMGHSFQTVKFAFWNVLTFQLAYKLLAAIVFVPLFGIIFNKLLYFGGYANATNDELLAFLKTPYGILAI VILSLLALFLIFTEFAVLIIISYFAHKRQKVRLRPILYKTVTYLPTLFTYCLPGFILYAVVLLPLLNMGYETALIPQIQI PNFITGELFKTTMGQVGYYTFFAVVAYLNLRWIFVLPIVVLEQKPFRVAARKSAKLVKESFFKVLFFLVGFFISIGIVYV LFLGIYLLCLWGVYEFTNPKGTFALLAESTMSVFLTSTLYLFSFIVTPFYIMAITRLYLQKVPGEDVLLEEGLDYSKTKA DKCFFQKHRWKFIGVYIVGIITAGMVVAFIVTFITNTYKEPIIMAHRGYISKGVENTKEALQGAIDAKADYAEIDVLQTK DGELAVIHDLKLKRLANANVQVSDLTMDELRQLTLSQDGFSGQISTLDEIIKLAKGKIKLNIEVKLHGGEKDFVNKVLKT IKDNEFEKQCVIQTLHYPLIKEFKRANPNIKVGYILYASRAHLKNVKADFYVAEEYMLNKKLVKEARKLNKPIYVWTVND MESLKGYYKLNVDGIITDYPEDARETIKMLKEQEEEESDLFDKITETTDDLFSKLFISYPAAS
Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to sn-glycerol 3-phosphate (G3P) and the corresponding alcohols [H]
COG id: COG0584
COG function: function code C; Glycerophosphoryl diester phosphodiesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GDPD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004129 - InterPro: IPR017946 [H]
Pfam domain/function: PF03009 GDPD [H]
EC number: =3.1.4.46 [H]
Molecular weight: Translated: 71287; Mature: 71287
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHRKRLSIPGVMGHSFQTVKFAFWNVLTFQLAYKLLAAIVFVPLFGIIFNKLLYFGGYA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NATNDELLAFLKTPYGILAIVILSLLALFLIFTEFAVLIIISYFAHKRQKVRLRPILYKT CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTYLPTLFTYCLPGFILYAVVLLPLLNMGYETALIPQIQIPNFITGELFKTTMGQVGYYT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHH FFAVVAYLNLRWIFVLPIVVLEQKPFRVAARKSAKLVKESFFKVLFFLVGFFISIGIVYV HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFLGIYLLCLWGVYEFTNPKGTFALLAESTMSVFLTSTLYLFSFIVTPFYIMAITRLYLQ HHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVPGEDVLLEEGLDYSKTKADKCFFQKHRWKFIGVYIVGIITAGMVVAFIVTFITNTYKE HCCCCCCHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PIIMAHRGYISKGVENTKEALQGAIDAKADYAEIDVLQTKDGELAVIHDLKLKRLANANV CEEEEECCHHHHCHHHHHHHHHHHHCCCCCHHHEEEEECCCCCEEEEEHHHHHHHCCCCC QVSDLTMDELRQLTLSQDGFSGQISTLDEIIKLAKGKIKLNIEVKLHGGEKDFVNKVLKT EEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHHH IKDNEFEKQCVIQTLHYPLIKEFKRANPNIKVGYILYASRAHLKNVKADFYVAEEYMLNK HCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECHHHHHCCCHHHEEHHHHHHHH KLVKEARKLNKPIYVWTVNDMESLKGYYKLNVDGIITDYPEDARETIKMLKEQEEEESDL HHHHHHHHCCCCEEEEECCCHHHCCCEEEEEECCEECCCCHHHHHHHHHHHHHCHHHHHH FDKITETTDDLFSKLFISYPAAS HHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQHRKRLSIPGVMGHSFQTVKFAFWNVLTFQLAYKLLAAIVFVPLFGIIFNKLLYFGGYA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NATNDELLAFLKTPYGILAIVILSLLALFLIFTEFAVLIIISYFAHKRQKVRLRPILYKT CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTYLPTLFTYCLPGFILYAVVLLPLLNMGYETALIPQIQIPNFITGELFKTTMGQVGYYT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHH FFAVVAYLNLRWIFVLPIVVLEQKPFRVAARKSAKLVKESFFKVLFFLVGFFISIGIVYV HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFLGIYLLCLWGVYEFTNPKGTFALLAESTMSVFLTSTLYLFSFIVTPFYIMAITRLYLQ HHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVPGEDVLLEEGLDYSKTKADKCFFQKHRWKFIGVYIVGIITAGMVVAFIVTFITNTYKE HCCCCCCHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PIIMAHRGYISKGVENTKEALQGAIDAKADYAEIDVLQTKDGELAVIHDLKLKRLANANV CEEEEECCHHHHCHHHHHHHHHHHHCCCCCHHHEEEEECCCCCEEEEEHHHHHHHCCCCC QVSDLTMDELRQLTLSQDGFSGQISTLDEIIKLAKGKIKLNIEVKLHGGEKDFVNKVLKT EEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHHH IKDNEFEKQCVIQTLHYPLIKEFKRANPNIKVGYILYASRAHLKNVKADFYVAEEYMLNK HCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECHHHHHCCCHHHEEHHHHHHHH KLVKEARKLNKPIYVWTVNDMESLKGYYKLNVDGIITDYPEDARETIKMLKEQEEEESDL HHHHHHHHCCCCEEEEECCCHHHCCCEEEEEECCEECCCCHHHHHHHHHHHHHCHHHHHH FDKITETTDDLFSKLFISYPAAS HHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]