Click here to switch to the map view.

The map label for this gene is yrhD [H]

Identifier: 218901785

GI number: 218901785

Start: 615342

End: 615824

Strand: Direct

Name: yrhD [H]

Synonym: BCAH820_0646

Alternate gene names: 218901785

Gene position: 615342-615824 (Clockwise)

Preceding gene: 218901784

Following gene: 218901786

Centisome position: 11.6

GC content: 36.02

Gene sequence:

>483_bases
GTGGCAAAAGAAATTACTTTAATTAAAAAGAAAGTTGTAACAGAGGAAGAACAGAAACAGCAAGTAGCAGATGCACTTCT
CAATGAGCTATCTAATAATCGTGAAGCAGTGGAAGAAACGATGCAGCTGTTAGCACAGTTGCAGAAGGCTGGTATATTAG
ATGCGGCGATTAGTTTACTTGCTGCGAAGGAAGATGTTTCAAAGATTGCTGTGGAGCAATTAAATCGTGAACCAGTTAAA
AATGCACTCAACAATATGATGGGGGCAGGAGAAGCATTATCTTCAGTTGATCCGGAAGTAACGAAACAAATTACATCTAG
CTTAGTTACGGGATTACAATTTGCAACAGATGAATTAAATAGTGGTAAAAAAACAAAAGTGATGGATTTCTTTAAAGTGT
TAAAAGATCCAGATATCAATAGAGCCATTACATTTGGTTTTAGTTTCTTGAAAGCATTTGGACAAGGGTTAGAGAAAAAA
TAG

Upstream 100 bases:

>100_bases
CCCGCGAGATAAAAATCGTAATCCGCAAAATGGTGTTGAAATCGAGCAAAAGTGGCAAAGAAAACAATACGTATCACTTG
TGGACTAGGGGGCGGAGATA

Downstream 100 bases:

>100_bases
AGTAGATGAAAAAAGTGATGGGGAGTAACCATCACTTTTTTCATTGTATGTATAAGAGTGTTCATGTTAAGCGGAATATA
TTATTATTAAAAAGATGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MAKEITLIKKKVVTEEEQKQQVADALLNELSNNREAVEETMQLLAQLQKAGILDAAISLLAAKEDVSKIAVEQLNREPVK
NALNNMMGAGEALSSVDPEVTKQITSSLVTGLQFATDELNSGKKTKVMDFFKVLKDPDINRAITFGFSFLKAFGQGLEKK

Sequences:

>Translated_160_residues
MAKEITLIKKKVVTEEEQKQQVADALLNELSNNREAVEETMQLLAQLQKAGILDAAISLLAAKEDVSKIAVEQLNREPVK
NALNNMMGAGEALSSVDPEVTKQITSSLVTGLQFATDELNSGKKTKVMDFFKVLKDPDINRAITFGFSFLKAFGQGLEKK
>Mature_159_residues
AKEITLIKKKVVTEEEQKQQVADALLNELSNNREAVEETMQLLAQLQKAGILDAAISLLAAKEDVSKIAVEQLNREPVKN
ALNNMMGAGEALSSVDPEVTKQITSSLVTGLQFATDELNSGKKTKVMDFFKVLKDPDINRAITFGFSFLKAFGQGLEKK

Specific function: Unknown

COG id: COG2427

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.fulgidus AF1717 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012440 [H]

Pfam domain/function: PF07849 DUF1641 [H]

EC number: NA

Molecular weight: Translated: 17540; Mature: 17409

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKEITLIKKKVVTEEEQKQQVADALLNELSNNREAVEETMQLLAQLQKAGILDAAISLL
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
AAKEDVSKIAVEQLNREPVKNALNNMMGAGEALSSVDPEVTKQITSSLVTGLQFATDELN
HHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
SGKKTKVMDFFKVLKDPDINRAITFGFSFLKAFGQGLEKK
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AKEITLIKKKVVTEEEQKQQVADALLNELSNNREAVEETMQLLAQLQKAGILDAAISLL
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
AAKEDVSKIAVEQLNREPVKNALNNMMGAGEALSSVDPEVTKQITSSLVTGLQFATDELN
HHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
SGKKTKVMDFFKVLKDPDINRAITFGFSFLKAFGQGLEKK
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]