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The map label for this gene is ydeD [H]

Identifier: 218901776

GI number: 218901776

Start: 604373

End: 605299

Strand: Reverse

Name: ydeD [H]

Synonym: BCAH820_0637

Alternate gene names: 218901776

Gene position: 605299-604373 (Counterclockwise)

Preceding gene: 218901778

Following gene: 218901775

Centisome position: 11.41

GC content: 35.6

Gene sequence:

>927_bases
ATGAACAACAGTAGACGAATTGGACTCATTATGATTATTACAGGAGCTACCTTATGGGGATTATCTGGCCCTATGATTCA
GTGGCTATTTCAACATACTAACGTATCATCAGTTGATTTTTTAACAATTCGCTTGTTGCTTGCGGGATTATTTATTTTAT
CTTTTTTACTGGTAAAGAAACAAAACATATTTCAAATTTGGAAACACCCTAGATATTCTATACAACTTATTATTTTCTCT
ATTCTCGGCATGCTCGGTGCGCAATACGCCTTTATTGAAACAGTTCATATTAGTAATGCGGTCACAGCGACACTATTTCA
ATTTCTAGGTCCTGTTCTTATTACCATGTATGTCGCATTTGAACAACGAAAATTCCCTGCTTCTATGCAACTACTCGCCA
TTATAACTGCACTAACGGGTACGTATTTTATTATTACGAACGGTTCCATTGAAAATATTGTTTTATCGAAAGAAGCGATT
ATTTTTGGCCTATTAACAGCAATTGGATTTGCATTTTATACCCTTCATCCAGCTTCTCTTATTAAAGAATGTGGAACAAT
TGTAGTAATTGGATGGGGGATGTTAATGGGAGGCATTGCCCTGCTTATTTGTAATCGCTCGTTTGAATGGACTCAGCTTT
CGCAAACTTTTACACTAAAAACTTTTTCAATGCTTATTCTAATCATCATAAGTGGCACTCTTTCTTTCCTTCTTTATATC
GGTAGTTTGAAATATTTAGCCGCAACTGAAACAAGCATTTTATCTAGCATTGAACCACTTGTAGCAGCTATCGTTTCAAT
CGCTTGGCTGAATGAATCCTTTGGAGCCTATCAATTACTAGGCGGCCTATGTATCGTTCTTTCTGTTATTTTCTTAACGA
TGCCGCAAAAAGAAAATGAAGCTACCTTTTCAACTGAACAAATATAA

Upstream 100 bases:

>100_bases
AACTAAAATCTGATACTTTTTACAGTACCAGAAGTTATATATAATTCCTTTTATCATGTCACACACAAAAAATCAAATAC
TCGAGAGGAGATGCATGATC

Downstream 100 bases:

>100_bases
AAAATGTCAAAAGAGGTCGTACAAAACTTACGACCTCTTTTGACGTTTTAAAGGAATTGTCCCGCTTTCTGGCAAATACA
ATTACACTAACAATCAAAAT

Product: transporter, EamA family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSVDFLTIRLLLAGLFILSFLLVKKQNIFQIWKHPRYSIQLIIFS
ILGMLGAQYAFIETVHISNAVTATLFQFLGPVLITMYVAFEQRKFPASMQLLAIITALTGTYFIITNGSIENIVLSKEAI
IFGLLTAIGFAFYTLHPASLIKECGTIVVIGWGMLMGGIALLICNRSFEWTQLSQTFTLKTFSMLILIIISGTLSFLLYI
GSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGLCIVLSVIFLTMPQKENEATFSTEQI

Sequences:

>Translated_308_residues
MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSVDFLTIRLLLAGLFILSFLLVKKQNIFQIWKHPRYSIQLIIFS
ILGMLGAQYAFIETVHISNAVTATLFQFLGPVLITMYVAFEQRKFPASMQLLAIITALTGTYFIITNGSIENIVLSKEAI
IFGLLTAIGFAFYTLHPASLIKECGTIVVIGWGMLMGGIALLICNRSFEWTQLSQTFTLKTFSMLILIIISGTLSFLLYI
GSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGLCIVLSVIFLTMPQKENEATFSTEQI
>Mature_308_residues
MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSVDFLTIRLLLAGLFILSFLLVKKQNIFQIWKHPRYSIQLIIFS
ILGMLGAQYAFIETVHISNAVTATLFQFLGPVLITMYVAFEQRKFPASMQLLAIITALTGTYFIITNGSIENIVLSKEAI
IFGLLTAIGFAFYTLHPASLIKECGTIVVIGWGMLMGGIALLICNRSFEWTQLSQTFTLKTFSMLILIIISGTLSFLLYI
GSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGLCIVLSVIFLTMPQKENEATFSTEQI

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1790092, Length=302, Percent_Identity=34.1059602649007, Blast_Score=158, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34088; Mature: 34088

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSVDFLTIRLLLAGLFILSFLLVKK
CCCCCEEEEEEEEECCHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QNIFQIWKHPRYSIQLIIFSILGMLGAQYAFIETVHISNAVTATLFQFLGPVLITMYVAF
HHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHH
EQRKFPASMQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPASL
HHCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHH
IKECGTIVVIGWGMLMGGIALLICNRSFEWTQLSQTFTLKTFSMLILIIISGTLSFLLYI
HHHCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGLCIVLSVIFLTMPQKENE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
ATFSTEQI
CCCCCCCC
>Mature Secondary Structure
MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSVDFLTIRLLLAGLFILSFLLVKK
CCCCCEEEEEEEEECCHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QNIFQIWKHPRYSIQLIIFSILGMLGAQYAFIETVHISNAVTATLFQFLGPVLITMYVAF
HHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHH
EQRKFPASMQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPASL
HHCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHH
IKECGTIVVIGWGMLMGGIALLICNRSFEWTQLSQTFTLKTFSMLILIIISGTLSFLLYI
HHHCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGLCIVLSVIFLTMPQKENE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
ATFSTEQI
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]