Click here to switch to the map view.

The map label for this gene is yfhF [H]

Identifier: 218901654

GI number: 218901654

Start: 487046

End: 487951

Strand: Reverse

Name: yfhF [H]

Synonym: BCAH820_0496

Alternate gene names: 218901654

Gene position: 487951-487046 (Counterclockwise)

Preceding gene: 218901657

Following gene: 218901653

Centisome position: 9.2

GC content: 37.64

Gene sequence:

>906_bases
GTGAAAATCGCAATTTCTGGTGGTACCGGCTTTATCGGCACATACCTTTCTACTTTTTTTATTCAAAAAGGATATACGGT
TTACATTCTCACAAGAAAAAAAACTACTGAAACTTCTCACCCTAACCTTCAGTATGTGCAATGGACACCAGATTTACAAA
CCTTCCCTCTCTCTTCTATTGATGTAGTTATTAATCTAGCTGGAGAGTCTATTAATAGTAGATGGACAAAGAAACAAAAG
AAAATCATTTTAAACAGTAGAATTCAAACAACAAAAGGACTCATTAAACAATTGCAGGCACTCCCTGCAAAACCACATAC
ATTTATTAACGCGAGTGCAATTGGATACTATGGAACGTCTGAAACCGAGTCTTTTACAGAACAGCATGTGACTCCCGGAA
ATGACTTTTTAGCAAATACAGTATATTCATGGGAACAAGAAGCATCTAAAGCACGCTCTCTCGGAATACGAACAATCTAT
GCACGATTCGGAGTCATATTAGGTCCAGACGGAGGAGCCCTTCCCAAAATGCTACTTCCCTATCAATTCTATATCGGAGG
TACAGTTGGATCTGGAAAGCAATGGTTATCATGGATTCATATAGACGATGTCGCTTCCATGATTGATTTCATCATACACA
AAAAAGAAATTGATGGCCCGCTCAACATTACAGCTCCAGAGCCTATAAGAATGAAGGAATTTGGAGAAACCATTGCAACT
ATAATGAAAAAACCTCATTGGTTACCTGTCCCTTCATTTATGCTTCATGCTTTATTAGGTGAGATGAGCATACTTGTACT
AGAAGGACAACATGTATTACCTAGTAAAGCAATTGAGCATGGGTATCAATACACATTTCCAACAATAGACCATGCATTAC
AAAATATACTTTCGCATACAATGTAG

Upstream 100 bases:

>100_bases
TTTTTGTAATGACAGCCATACTCTCACCTCTCTATTATTTTAACATAGTCGAGGAACGTTTTTGCTTTTCAAGAATATAT
ATAATGAGGAGGAAATAATT

Downstream 100 bases:

>100_bases
TACTTCTAAAACATAGTTTTACAGGGGTTACTTCCAAAATTTTCATTTCCTAGAATCCGGAGCATTATTACACAAATAAT
CGTTCAGTTACTTTTCCTTA

Product: cell division inhibitor-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MKIAISGGTGFIGTYLSTFFIQKGYTVYILTRKKTTETSHPNLQYVQWTPDLQTFPLSSIDVVINLAGESINSRWTKKQK
KIILNSRIQTTKGLIKQLQALPAKPHTFINASAIGYYGTSETESFTEQHVTPGNDFLANTVYSWEQEASKARSLGIRTIY
ARFGVILGPDGGALPKMLLPYQFYIGGTVGSGKQWLSWIHIDDVASMIDFIIHKKEIDGPLNITAPEPIRMKEFGETIAT
IMKKPHWLPVPSFMLHALLGEMSILVLEGQHVLPSKAIEHGYQYTFPTIDHALQNILSHTM

Sequences:

>Translated_301_residues
MKIAISGGTGFIGTYLSTFFIQKGYTVYILTRKKTTETSHPNLQYVQWTPDLQTFPLSSIDVVINLAGESINSRWTKKQK
KIILNSRIQTTKGLIKQLQALPAKPHTFINASAIGYYGTSETESFTEQHVTPGNDFLANTVYSWEQEASKARSLGIRTIY
ARFGVILGPDGGALPKMLLPYQFYIGGTVGSGKQWLSWIHIDDVASMIDFIIHKKEIDGPLNITAPEPIRMKEFGETIAT
IMKKPHWLPVPSFMLHALLGEMSILVLEGQHVLPSKAIEHGYQYTFPTIDHALQNILSHTM
>Mature_301_residues
MKIAISGGTGFIGTYLSTFFIQKGYTVYILTRKKTTETSHPNLQYVQWTPDLQTFPLSSIDVVINLAGESINSRWTKKQK
KIILNSRIQTTKGLIKQLQALPAKPHTFINASAIGYYGTSETESFTEQHVTPGNDFLANTVYSWEQEASKARSLGIRTIY
ARFGVILGPDGGALPKMLLPYQFYIGGTVGSGKQWLSWIHIDDVASMIDFIIHKKEIDGPLNITAPEPIRMKEFGETIAT
IMKKPHWLPVPSFMLHALLGEMSILVLEGQHVLPSKAIEHGYQYTFPTIDHALQNILSHTM

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=304, Percent_Identity=34.5394736842105, Blast_Score=193, Evalue=2e-49,
Organism=Escherichia coli, GI1788642, Length=298, Percent_Identity=36.241610738255, Blast_Score=204, Evalue=5e-54,
Organism=Drosophila melanogaster, GI28573846, Length=296, Percent_Identity=31.0810810810811, Blast_Score=174, Evalue=7e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33667; Mature: 33667

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAISGGTGFIGTYLSTFFIQKGYTVYILTRKKTTETSHPNLQYVQWTPDLQTFPLSSI
CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCE
DVVINLAGESINSRWTKKQKKIILNSRIQTTKGLIKQLQALPAKPHTFINASAIGYYGTS
EEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEECCEEEECCCC
ETESFTEQHVTPGNDFLANTVYSWEQEASKARSLGIRTIYARFGVILGPDGGALPKMLLP
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHEEEHHCCEEECCCCCCCCHHHCC
YQFYIGGTVGSGKQWLSWIHIDDVASMIDFIIHKKEIDGPLNITAPEPIRMKEFGETIAT
EEEEECCCCCCCHHHHEEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHH
IMKKPHWLPVPSFMLHALLGEMSILVLEGQHVLPSKAIEHGYQYTFPTIDHALQNILSHT
HHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCEEECCHHHHHHHHHHHHC
M
C
>Mature Secondary Structure
MKIAISGGTGFIGTYLSTFFIQKGYTVYILTRKKTTETSHPNLQYVQWTPDLQTFPLSSI
CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCE
DVVINLAGESINSRWTKKQKKIILNSRIQTTKGLIKQLQALPAKPHTFINASAIGYYGTS
EEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEECCEEEECCCC
ETESFTEQHVTPGNDFLANTVYSWEQEASKARSLGIRTIYARFGVILGPDGGALPKMLLP
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHEEEHHCCEEECCCCCCCCHHHCC
YQFYIGGTVGSGKQWLSWIHIDDVASMIDFIIHKKEIDGPLNITAPEPIRMKEFGETIAT
EEEEECCCCCCCHHHHEEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHH
IMKKPHWLPVPSFMLHALLGEMSILVLEGQHVLPSKAIEHGYQYTFPTIDHALQNILSHT
HHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCEEECCHHHHHHHHHHHHC
M
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]