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The map label for this gene is rne

Identifier: 218890825

GI number:

Start: 2259098

End: 2262271

Strand: Reverse

Name: rne

Synonym: PLES_20861

Alternate gene names: NA

Gene position: NA

Preceding gene: 218890830

Following gene: 218890816

Centisome position: NA

GC content: NA

Gene sequence:

>3174_bases
ATGAAAAGAATGCTGATCAACGCGACTCAACCCGAGGAGTTGCGTGTTGCACTGGTCGACGGCCAACGCCTGTTCGACCT
CGACATCGAGTCGGGCGCCCGCGAGCAGAAGAAGGCCAACATCTACAAAGGCCGCATCACTCGCGTCGAACCCAGCCTCG
AAGCCGCCTTCGTCGACTTCGGCGCCGAACGCCACGGCTTCCTCCCCCTCAAAGAAATCTCCCGCGAATACTTCAAGAAA
TCCCCCGAAGGCCGGATCAACATCAAGGAAGTCCTGAGCGAAGGCCAGGAAGTCATCGTCCAGGTCGAGAAGGAAGAGCG
CGGCAACAAGGGCGCCGCCCTGACCACCTTCATCAGCCTGGCCGGCCGTTACCTGGTGCTGATGCCGAACAACCCGCGCG
CCGGCGGCATCTCCCGCCGTATCGAAGGCGAAGAGCGCAACGAGCTGCGCGAGGGCCTGAACGGCCTCAACGCACCGGCC
GACATGGGCCTGATCGTGCGCACCGCCAGCCTCGGCCGCAGCACCGAGGAACTGCAGTGGGACCTCGACTACCTGCTGCA
ACTGTGGAGCGCGATCAAGGAAGCGTCCGGCGAACGTGGCGCGCCCTTCCTGATCTACCAGGAAAGCAACGTCATCATCC
GCGCCATCCGCGACTACCTGCGCCAGGACATCGGCGAAGTGCTGATCGACAGCATCGACGCCCAGGAAGAAGCCCTGAAC
TTCATCCGCCAGGTGATGCCGCAGTACGCCAGCAAGGTGAAGCTGTACCAGGACAGCGTTCCGCTGTTCAATCGCTTCCA
GATCGAGAGCCAGATCGAGACCGCTTTCCAGCGCGAAGTGAAGCTGCCGTCCGGCGGCTCCATCGTCATCGACCCGACCG
AGGCCCTGGTTTCCATCGACATCAACTCGGCGCGCGCCACCAAGGGCGGCGACATCGAGGAAACCGCCCTGCAGACCAAC
CTGGAAGCGGCCGAGGAAATCGCCCGCCAGCTGCGCCTGCGTGACATCGGCGGCCTGATCGTCATCGACTTCATCGACAT
GACCCCGGCGAAGAACCAGCGCGCCGTGGAAGAGCGTGTCCGCGAAGCCCTCGAGGCCGACCGCGCGCGCGTCCAGGTCG
GTCGCATCTCGCGCTTCGGCCTGCTGGAAATGTCCCGCCAGCGCCTGCGTCCGTCCCTCGGCGAGACCAGCGGCATCGTC
TGCCCGCGCTGCAACGGCCAGGGCATCATCCGCGACGTCGAGTCGCTGTCGCTGGCCATCCTGCGCCTGATTGAGGAAGA
AGCCCTGAAGGACCGCACCGCGGAAGTCCGCGCCCGCGTGCCCTTCCAGGTCGCCGCCTTCCTGCTCAACGAGAAGCGCA
ACGCCATCACCAAGATCGAACTGCGTACCCGCGCGCGCATCTTCATCCTGCCGGACGATCATCTGGAAACCCCGCATTTC
GAAGTCCAGCGTCTGCGCGATGACAGCCCCGAACTGGTTGCCGGCCAGACCAGCTACGAAATGGCCACCGTCGAGCACGA
AGAAGCCCAGCCGGTCAGCTCGACCCGCACCCTGGTCCGCCAGGAAGCAGCAGTCAAGACCGTCGCTCCCCAGCAGCCCG
CACCGCAACACACCGAAGCACCGGTCGAGCCGGCCAAGCCGATGCCCGAGCCGAGCCTGTTCCAGGGCCTGGTGAAGTCC
CTGGTCGGCCTGTTCGCAGGCAAGGATCAACCTGCCGCCAAGCCTGCTGAAACCAGCAAGCCGGCTGCCGAGCGCCAAAC
CCGCCAGGACGAGCGTCGCAACGGCCGCCAGCAGAACCGCCGCCGCGATGGCCGCGATGGCAATCGCCGCGACGAAGAGC
GCAAGCCCCGCGAGGAACGCGCAGAGCGTCAACCGCGCGAAGAGCGCGCCGAACGCCCGAACCGCGAAGAGCGCAGCGAA
CGTCGCCGCGAAGAGCGCGCCGAGCGCCCGGCTCGCGAGGAGCGCCAGCCGCGCGAAGGCCGTGAAGAGCGCGCCGAGCG
GACACCCCGCGAAGAGCGCCAACCGCGCGAAGGCCGCGAAGGTCGCGAGGAACGCAGCGAACGCCGCCGCGAAGAGCGCG
CCGAACGCCCGGCCCGCGAAGAGCGCCAACCCCGCGAAGGCCGTGAAGAACGCGCCGAGCGCCCGGCCCGCGAAGAGCGC
CAGCCGCGCGAGGATCGCCAGGCTCGCGACGCCGCGGCCCTGGAAGCCGAGGCATTGCCGAACGACGAGAGCCTGGAGCA
GGACGAGCAGGACGATACCGATGGCGAGCGCCCGCGCCGCCGCTCCCGCGGCCAGCGTCGTCGCAGCAACCGCCGCGAAC
GCCAGCGCGAGGTCAGCGGCGAGCTGGAAGGCAGCGAGGCGACCGATAACGCCGCCGCGCCGCTGAACACCGTCGCAGCC
GCCGCCGCTGCCGGTATCGCTGTCGCCAGCGAAGCCGTAGAAGCAAACGTGGAGCAAGCCCCGGCCACTACCAGCGAGGC
TGCCGGCGAAACCACGGCAAGCGATGAGACCGACGCGTCGACCAGCGAAGCCGTCGAAACCCAGGGCGCGGACAGCGAGG
CCAATACCGGCGAAACCGCCGACATCGAAGCGCCGGTGACCGTCAGCGTGGTCCGGGACGAAGCCGGCCAGAGCACCCTG
CTGGTCGCGCAAGCCACTGAAGAAGCTCCCTTCGCCAGCGAAAGCGTGGAAAGCCGCGAAGACGCCGAGAGCGCCGTGCA
ACCGGCAACGGAAGCGGCCGAAGAAGTTGCCGCCCCGGTGCCCGTCGAAGCAGCAGCCCCTAGCGAGCCCGCAACCACCG
AGGAGCCGACCCCGGCCATCGCGGCGGTGCCGGCCAACGCGACCGGCCGTGCCCTCAACGACCCACGGGAAAAACGTCGC
CTGCAACGCGAAGCCGAGCGTCTGGCACGCGAAGCCGCAGCAGCAGCCGAAGCGGCAGCTCAGGCCGCTCCCGCCGTCGA
GGAGGTCCCGGCTGTAGCGAGCGAGGAAGCGTCGGCCCAGGAGGAACCTGCTGCACCCCAGGCTGAAGAAATCGCCCAGG
CCGACGTTCCGTCCCAGGCGGACGAAGCCCAGGAAGCGGTACAGGCCGAGCCTGAAGCTTCCGGCGAAGACGCCACCGAC
ACGGAGCACGCGAAAAAGACCGAGGAAAGCGAAACCTCGCGCCCGCATGCCTGA

Upstream 100 bases:

>100_bases
GGAATGGCCCGCCATTCCTGAATACGCGCCCGAGCACCGACCGTGAGAGTCGTGTGTGCCGATCGCCGTTTCCGGTAGCC
CCGGAAACCATTGGTACTAC

Downstream 100 bases:

>100_bases
GTGACAGACTGAAAAAAGGGGATGCCATGGCATCCCCTTTTTTTTGCGTGTCATTCCGCGGCACTCCGGCATACCGCCCG
TCATGACCAGAGCCGCCGAA

Product: ribonuclease E

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1057_residues
MKRMLINATQPEELRVALVDGQRLFDLDIESGAREQKKANIYKGRITRVEPSLEAAFVDFGAERHGFLPLKEISREYFKK
SPEGRINIKEVLSEGQEVIVQVEKEERGNKGAALTTFISLAGRYLVLMPNNPRAGGISRRIEGEERNELREGLNGLNAPA
DMGLIVRTASLGRSTEELQWDLDYLLQLWSAIKEASGERGAPFLIYQESNVIIRAIRDYLRQDIGEVLIDSIDAQEEALN
FIRQVMPQYASKVKLYQDSVPLFNRFQIESQIETAFQREVKLPSGGSIVIDPTEALVSIDINSARATKGGDIEETALQTN
LEAAEEIARQLRLRDIGGLIVIDFIDMTPAKNQRAVEERVREALEADRARVQVGRISRFGLLEMSRQRLRPSLGETSGIV
CPRCNGQGIIRDVESLSLAILRLIEEEALKDRTAEVRARVPFQVAAFLLNEKRNAITKIELRTRARIFILPDDHLETPHF
EVQRLRDDSPELVAGQTSYEMATVEHEEAQPVSSTRTLVRQEAAVKTVAPQQPAPQHTEAPVEPAKPMPEPSLFQGLVKS
LVGLFAGKDQPAAKPAETSKPAAERQTRQDERRNGRQQNRRRDGRDGNRRDEERKPREERAERQPREERAERPNREERSE
RRREERAERPAREERQPREGREERAERTPREERQPREGREGREERSERRREERAERPAREERQPREGREERAERPAREER
QPREDRQARDAAALEAEALPNDESLEQDEQDDTDGERPRRRSRGQRRRSNRRERQREVSGELEGSEATDNAAAPLNTVAA
AAAAGIAVASEAVEANVEQAPATTSEAAGETTASDETDASTSEAVETQGADSEANTGETADIEAPVTVSVVRDEAGQSTL
LVAQATEEAPFASESVESREDAESAVQPATEAAEEVAAPVPVEAAAPSEPATTEEPTPAIAAVPANATGRALNDPREKRR
LQREAERLAREAAAAAEAAAQAAPAVEEVPAVASEEASAQEEPAAPQAEEIAQADVPSQADEAQEAVQAEPEASGEDATD
TEHAKKTEESETSRPHA

Sequences:
NA

Specific function: NA

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA