Click here to switch to the map view.

The map label for this gene is mfd

Identifier: 218890799

GI number:

Start: 2230847

End: 2234293

Strand: Reverse

Name: mfd

Synonym: PLES_20601

Alternate gene names: NA

Gene position: NA

Preceding gene: 218890811

Following gene: 218890798

Centisome position: NA

GC content: NA

Gene sequence:

>3447_bases
GTGTCCGTACTGCGTCTTCCCAGCCTGCCGGCCAGCGCCGGCAAGCAACACTGGGGCAACCTCCCCGGTGCCGCGCTGAG
CCTGGCTGTCGCCGAGGCCGCCAGTTCCGCCAAGCGCTTCACCCTGCTGCTGACCGCCGACAGCCAGAATGCCGAACGCC
TGGAACAGGAACTGCGGTTCTTCGCCCCCGACCTGCCGGTATTGCATTTCCCCGATTGGGAAACCCTGCCCTACGACGTC
TTTTCGCCGCACCAGGACATCATTTCCCAGCGCATCGCCGCCCTCTACCAGTTGCCGCAGCTCAAGCACGGCGTGCTGGT
GGTGCCGATCTCCACCGCCTTGCACCGCCTGGCGCCGACCCGCTTCCTGCTCGGCAGCAGCCTGGTCCTCGACGTCGGCC
AGAAACTCGACGTCGAGCGGATGCGCCTGCGCCTGGAAGGCGCCGGCTACCGCTGCGTCGACACGGTCTACGAGCACGGC
GAGTTCGCCGTCCGCGGCGCGCTGATCGACCTGTTCCCGATGGGCAGCGAGTTGCCCTTCCGTATCGACCTGTTCGACGA
CGAGATCGAGACCCTGCGCACCTTCGACCCGGAGACCCAGCGCTCCATCGACAAGGTCGAGTCGATCCGCCTGCTGCCGG
CACGCGAATTCCCCCTGAACAAGGAAGCGGTCACCGGCTTCCGCGGCCGCTTCCGCGAGCGCTTCGACGTCGACTACCGG
CGCTGCCCGATCTACCAGGACCTCGCCAGCGGTTTGACACCCTCGGGAATCGAGTACTACCTGCCGCTGTTCTTCGAGGA
AACCGCGACCCTCTTCGACTACCTGCCGCAAGACACCCAGGTGTTCTCCCTGCCCGGCATCGAACAGGCCGCGGAGCAGT
TCTGGAATGACGTACGCAGCCGCTACGAGGACCGCCGGGTCGATCCGGAACGGCCATTGCTGCCGCCGGCGGAAGTGTTC
CTTCCGGTGGAAGACTGCTTCGCCCGGCTGAAGAACTGGCCACGGGTGGTCGCCAGCCAGGAGGACGTCGAGCCGGGCGT
CGGGCGCGAGCGCTTCCCGGCCCTGCCGCTGCCGAACCTGGCGATCGAAGCCAAGGCCGCCGAGCCGCTGGCCGCGCTGC
GCCGGTTCATCGAGGAGTTCCCCGGCCGCGTACTGTTCTGCGCCGAATCGGCCGGACGCCGGGAAGTCCTGCTGGAGCTG
CTGGCCCGACTGAAGCTGCGCCCCGAGGAAGTCGACGGCTGGCCGGCCTTCCTCGCCAGCCAGGCACGCCTGGCGATCAG
CATCGCGCCGCTGGACGAGGGCCTGCTGCTGGACCATCCGGCCCTCGCCCTGGTCGCCGAAAGCCCGCTGTTCGGCCAGC
GCGTCATGCAGCGCCGGCGCCGGGAAAAGACCCGCGACGGCGGCGACGCGGTGATCAAGAACCTCACCGAGCTGCGCGAA
GGCGCGCCGGTGGTGCACATCGACCATGGCGTCGGCCGCTACCTGGGCCTGATCACCCTCGAGGTGGACAACCAGCAGGC
GGAATTCCTCATGCTGCAATACGCCGAGGACGCCAAGCTCTACGTGCCGGTCGCCAACCTGCACCTGATCGCCCGCTACA
CCGGCGCCGACGACGCCCTGGCGCCGTTGCACCGGCTCGGCTCGGAAACCTGGCAGAAGGCCAAGCGCAAGGCCGCCGAG
CAGGTCCGCGACGTCGCCGCCGAGCTGCTCGACATCTACGCCCGCCGCGCCGCCCGCGAAGGCTTCGCGTTCAAGGATCC
GCAGGCCGACTACGCGACCTTCTCGGCCGGCTTCCCGTTCGAGGAGACGCCGGACCAGCAAAGCGCCATCGAGGCGGTGG
TCGCCGATATGCTCGCGCCCAGGCCAATGGACCGCCTGGTCTGCGGCGACGTCGGCTTCGGCAAGACCGAAGTGGCGATG
CGCGCGGCGTTCGTCGCCGTGCATAGCGGCAAGCAGGTGGCGGTGCTGGTGCCCACCACCCTGCTCGCCCAGCAGCACTA
CAACAGCTTCCGCGACCGCTTCGCCGACTGGCCGGTGAGCGTCGAGGTGATGAGCCGCTTCAAGAGCGCCAAGGAAGTCG
AGAACGCTGCGCGGCTACTGGCCGAAGGCAAGATCGACATCCTCATCGGGACCCACAAGCTGCTCCAGGAAGACGTGAAG
TTCGCCAACCTGGGGTTGGTCGTGATCGACGAGGAACACCGCTTCGGGGTGCGCCAGAAGGAGCAGCTCAAGGCCCTGCG
CAGCGAAGTGGACATCCTCACCCTCACCGCCACGCCGATCCCGCGGACCCTGAACATGGCCGTCTCCGGCATGCGCGACC
TGTCCATCATCGCCACGCCGCCGGCGCGCCGCCTGTCGGTGCGCACCTTCGTCATGGAGCAGCAGAACGCGGTAATCAAG
GAAGCGCTGCTCCGCGAACTGCTGCGCGGCGGCCAGGTGTACTACCTGCACAACGAAGTGAAGACCATCGAGAAGTGCGC
CCGCGACCTCGCCGAACTGGTCCCGGAGGCGCGCATCGGCATCGGCCACGGACAGATGCACGAGCGCGAGCTGGAACAGG
TGATGAGCGACTTCTACCACAAACGCTTCAACGTGCTGGTGGCCTCGACCATCATCGAGACCGGCATCGACGTGCCCAGC
GCCAACACCATCCTCATCGAGCGCGCCGACAAGTTCGGCCTGGCCCAGTTGCACCAGTTGCGCGGCCGCGTCGGTCGCAG
CCACCACCAGGCCTACGCCTACCTGCTGACACCGCCGCGCCGTCAGATGACCCCGGACGCCGAGAAACGCCTGGAAGCCA
TCGCCAACGCCCAGGACCTGGGCGCCGGCTTCGTCCTCGCCACCCACGACCTGGAGATCCGCGGCGCCGGCGAGTTGCTC
GGCGACGGCCAGAGCGGGCAGATCCAGGCGGTCGGCTTCACCCTCTACATGGAAATGCTCGAACGGGCGGTGAAGGCCAT
CCGCAAGGGCGAGCAACCGAACCTCGAGCAGCCACTGGGCGGCGGGCCGGAGGTCAACCTGCGGGTGCCTGCGCTGATCC
CCGAGGATTACCTGCCCGACGTGCATGCCCGGCTGATCCTCTACAAGCGCATCGCCAACGCCCCTGACGAGGAAGGTTTG
CGCGAGTTGCAGGTGGAGATGATCGACCGCTTCGGGCTCCTGCCCGATCCGGCGAAGAACCTGATGCGCCTGACCCTTCT
GAAACTGCAGGCGGAAAAACTTGGAATACTCAAGGTCGATGCCGGACCGCAGGGCGGTCGTATAGAATTCGCCGCCGATA
CCCAGGTCGACCCGCTGGTATTGATCAAGCTGATCCAGGGCCAACCGAACCGCTACAAGTTCGAAGGCGCAACCCTGTTC
CGCTTCCAGGTGCCCATGGAACGACCGGAAGAACGCTTCAATACCCTGGAGGCGCTGTTCGAGCGCCTGACACCGCAAAC
CACCTAA

Upstream 100 bases:

>100_bases
GCCAGGCTCGGCAATCTGCAGCAGTCGGAAGACTGACATCCAGCAGTCGGGAAAGTTACAATCCGGCGGGTCAAATTCCC
GACCGGAGCCCAGCTTGCCC

Downstream 100 bases:

>100_bases
GGATTAGCCTATGCGCTTGTTCCGTTGCCTTGCCCTGCTGCTCTCACTGGCCGCCCCCGCGGCATTCGCCGGCGGTCCCT
ACCAGGTGGAACTGGTGGTG

Product: transcription-repair coupling protein Mfd

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1148_residues
MSVLRLPSLPASAGKQHWGNLPGAALSLAVAEAASSAKRFTLLLTADSQNAERLEQELRFFAPDLPVLHFPDWETLPYDV
FSPHQDIISQRIAALYQLPQLKHGVLVVPISTALHRLAPTRFLLGSSLVLDVGQKLDVERMRLRLEGAGYRCVDTVYEHG
EFAVRGALIDLFPMGSELPFRIDLFDDEIETLRTFDPETQRSIDKVESIRLLPAREFPLNKEAVTGFRGRFRERFDVDYR
RCPIYQDLASGLTPSGIEYYLPLFFEETATLFDYLPQDTQVFSLPGIEQAAEQFWNDVRSRYEDRRVDPERPLLPPAEVF
LPVEDCFARLKNWPRVVASQEDVEPGVGRERFPALPLPNLAIEAKAAEPLAALRRFIEEFPGRVLFCAESAGRREVLLEL
LARLKLRPEEVDGWPAFLASQARLAISIAPLDEGLLLDHPALALVAESPLFGQRVMQRRRREKTRDGGDAVIKNLTELRE
GAPVVHIDHGVGRYLGLITLEVDNQQAEFLMLQYAEDAKLYVPVANLHLIARYTGADDALAPLHRLGSETWQKAKRKAAE
QVRDVAAELLDIYARRAAREGFAFKDPQADYATFSAGFPFEETPDQQSAIEAVVADMLAPRPMDRLVCGDVGFGKTEVAM
RAAFVAVHSGKQVAVLVPTTLLAQQHYNSFRDRFADWPVSVEVMSRFKSAKEVENAARLLAEGKIDILIGTHKLLQEDVK
FANLGLVVIDEEHRFGVRQKEQLKALRSEVDILTLTATPIPRTLNMAVSGMRDLSIIATPPARRLSVRTFVMEQQNAVIK
EALLRELLRGGQVYYLHNEVKTIEKCARDLAELVPEARIGIGHGQMHERELEQVMSDFYHKRFNVLVASTIIETGIDVPS
ANTILIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPPRRQMTPDAEKRLEAIANAQDLGAGFVLATHDLEIRGAGELL
GDGQSGQIQAVGFTLYMEMLERAVKAIRKGEQPNLEQPLGGGPEVNLRVPALIPEDYLPDVHARLILYKRIANAPDEEGL
RELQVEMIDRFGLLPDPAKNLMRLTLLKLQAEKLGILKVDAGPQGGRIEFAADTQVDPLVLIKLIQGQPNRYKFEGATLF
RFQVPMERPEERFNTLEALFERLTPQTT

Sequences:
NA

Specific function: NA

COG id: COG1197

COG function: function code LK; Transcription-repair coupling factor (superfamily II helicase)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA