Definition Desulfatibacillum alkenivorans AK-01 chromosome, complete genome.
Accession NC_011768
Length 6,517,073

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Identifier: 218781864

GI number:

Start: 5063448

End: 5064656

Strand: Direct

Name: Not Available

Synonym: Dalk_4029

Alternate gene names: NA

Gene position: NA

Preceding gene: 218781863

Following gene: 218781865

Centisome position: NA

GC content: NA

Gene sequence:

>1209_bases
ATGATTCCTCAACAAAACCGTCTGTGGTGGGAGAGGGAGGACCTTTGTTACAAAGACGGGAATTTGGTTTTTTCAGGAAA
ATCCGCGGCCGGCCTAATCAACGTGACCGGGACGCCTGCTTTTTTTTACAGCGCAAACCGGATTTCGCAAAACCTTGAGC
GATTGCAAGAAGCCCTGAGTCAGCTTGATTCTTATCAAATTTATTATGCGATCAAAGCGAACAGGTTCGCCCCTATCCTG
ACGCATATTAAAAAGACGGGGCTGTGCGGGGTGGACATATGCTCTCCCAATGAGCTGCTACATGCTTTTTCCTGCGGCTT
TACATGCAGTGAAATCTCGTACACCGCCCACGCAATGACCAATGACGAGCTAAGGCTGCTCGCCGATAATCCGGACGTGA
GGTTGAATTGCGACTCTTTAAGCACTATCCGGCGCTTGGGACAGTTCTGCAGCCATCGGAAAATCGGCATCCGGGTCAAC
CCGGCCATGGGCATCGGTTACAGGGACAGCGAAACCCTGAGATACAGCGGAGACAAGACCACCAAGTTCGGCGTCTACAG
GGAACAGTTCGAGGAAGCGCTGGCGCTGGCCTCCAAGCACGGCCTTATTGTGGATACCATCCATTTCCATACCGGATGCG
GCTACCTGAATAACCAGTTATCCATCTTTGATGAGATCCTGGAAGCCACGCACTGGTTTACGGACAAAGTGAAAGACCTT
GCCTCCGTCAATCTGGGCGGCGGGCTCGGGGTTCCCCATGATGAGGATGACGTGAACCTGGATCTGGACTCCTGGGTCTC
TGTCATCAACAAGCATTACGGAGGCAAAGGGCTGACCGTTTGCGTGGAACCGGGGGACTATGTCGTCAAGGACAGCGGCA
TTCTGATTTTGGAGGTCAACACCGTCGAAAGAAAACAGCAGACCGATTTTATCGGGGTTAACGGCGGATTTAACCTGGCC
ATAGAGCCCGCCTTTTACGGATTGCCCTGCGAGCCGGTCGTCCTGGAGCAAAAGACGGATACGCTGAAACCGGTTACGAT
TGCCGGGAATATCAACGAGTCCCTGGATGTTTGGAAGGACAATTTCCCCATGCCGGATCAGATCAAGGAGGGAGACCTCC
TTGCCTTTATCAATGCGGGCGGATACGCGTCATCCATGATGTCCAACCACTGTATGCGGGGACAGGTTTCTGAAAACATT
GTATTTTAA

Upstream 100 bases:

>100_bases
CCTGCGGCTCCGTTAATTGCCGAAAATGGATAACCGGCCGCAAAGAGCCCATCAATGAAATGGGCCGGAAGTACCTCGCG
GATTTGGAAAGGAAGTGTGG

Downstream 100 bases:

>100_bases
AAGACCCCAAGGGGCATAGGAATATTGAAGGAAAAGACATGAATCTTGCAGGAAAAGACAAAAAACACATCATCCATCCA
TGGTCGAATCTGGGAAGCGA

Product: diaminopimelate decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>402_residues
MIPQQNRLWWEREDLCYKDGNLVFSGKSAAGLINVTGTPAFFYSANRISQNLERLQEALSQLDSYQIYYAIKANRFAPIL
THIKKTGLCGVDICSPNELLHAFSCGFTCSEISYTAHAMTNDELRLLADNPDVRLNCDSLSTIRRLGQFCSHRKIGIRVN
PAMGIGYRDSETLRYSGDKTTKFGVYREQFEEALALASKHGLIVDTIHFHTGCGYLNNQLSIFDEILEATHWFTDKVKDL
ASVNLGGGLGVPHDEDDVNLDLDSWVSVINKHYGGKGLTVCVEPGDYVVKDSGILILEVNTVERKQQTDFIGVNGGFNLA
IEPAFYGLPCEPVVLEQKTDTLKPVTIAGNINESLDVWKDNFPMPDQIKEGDLLAFINAGGYASSMMSNHCMRGQVSENI
VF

Sequences:
NA

Specific function: NA

COG id: COG0019

COG function: function code E; Diaminopimelate decarboxylase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA