| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884782
Identifier: 218884782
GI number: 218884782
Start: 1361214
End: 1362047
Strand: Reverse
Name: 218884782
Synonym: DKAM_1471
Alternate gene names: NA
Gene position: 1362047-1361214 (Counterclockwise)
Preceding gene: 218884783
Following gene: 218884781
Centisome position: 99.77
GC content: 43.41
Gene sequence:
>834_bases ATGAGCCTAGACGAGTTTATTGAGAAGACACCGGCAACCCTGGATAAAAACGACTCGCTCATAAATTATGTAAGACTCCT TAAGAAAACAGGAAACGATAAGGTAGTAATACTGGAGAATAAGAGGATTAATGAAAAGTATGTTAAAAACATTGCAGGAG TGGTCTCAAGTAGAGACGTAGTGGGGAAAATAGCCACCGAGAGGCTTAGACTCTCATCACCTGGCAGGCTAAGAGTATCA GGCTTCATGAGTATACAGCCGTTGATAGCTAGGCTAGATACACCTTTAAGCGATATAGTGAAAACCATGGCCTCGAAATC CATCGGGATACTGCCCATTGTAGGCAACGAAGGACTAGAGGGAGCTATCTACAGGTGGAGTCTGTTAAAGCTAGCCGAGT CCATTACAGACCCGGTTTCGAAAATTGTAAAGAAGGACTACTTGAAGATCAGGGTAGACGATAGTCTTTTAATGCTTAGG CAGGGCATGTTGAACCGTGATGAAAGCTTCGCGGTAGTAGTGGGCGAGGACGGAAAGCCTATTGGGTACATAACCATAAT GGATCTAGCATATGCTTTCACAACATTCATTGAGAACATTCCTGAAAAGCATAGAAAGGAGAGGATAGAGGAGCTAGTGG TAAGGGACTACTATAAAAGAAACCTGCCAGTGGTGAGCGAGGAAGCCGAGATATATAAGGCGGCACGAATACTTTACGGG GAGAAGACACGTGGCGTATTAGTATTAAATAATGAGGGTAAGGTAAGCGGCGTAGTAAGAGAGCATGATTTAATAGGTTA TCTAGCCTTAACAATCCTGGGTATAACAAGATGA
Upstream 100 bases:
>100_bases CGCACTCGTCGTTGACGATGAAGGAGTACTCCAGGGAATAATCACGGAGAGAGATGTATTATACGCCTTAACAATAACAG GGTACAGGGCCGGTTAGCAT
Downstream 100 bases:
>100_bases GCAGTGAGCAGAAATTCATCGTAGACGCTATGCTAGGCTCCCTGGCGAGATGGCTTAGAATACTGGGCTATGATACCGTT TACGGGAATAAAATGGAGGA
Product: CBS domain containing protein
Products: NA
Alternate protein names: CBS Domain Containing Protein; IMP Dehydrogenase Related Protein; Signal Transduction Protein With Cbs Domains; Inosine-5-Monophosphate Dehydrogenase Related Protein I
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSLDEFIEKTPATLDKNDSLINYVRLLKKTGNDKVVILENKRINEKYVKNIAGVVSSRDVVGKIATERLRLSSPGRLRVS GFMSIQPLIARLDTPLSDIVKTMASKSIGILPIVGNEGLEGAIYRWSLLKLAESITDPVSKIVKKDYLKIRVDDSLLMLR QGMLNRDESFAVVVGEDGKPIGYITIMDLAYAFTTFIENIPEKHRKERIEELVVRDYYKRNLPVVSEEAEIYKAARILYG EKTRGVLVLNNEGKVSGVVREHDLIGYLALTILGITR
Sequences:
>Translated_277_residues MSLDEFIEKTPATLDKNDSLINYVRLLKKTGNDKVVILENKRINEKYVKNIAGVVSSRDVVGKIATERLRLSSPGRLRVS GFMSIQPLIARLDTPLSDIVKTMASKSIGILPIVGNEGLEGAIYRWSLLKLAESITDPVSKIVKKDYLKIRVDDSLLMLR QGMLNRDESFAVVVGEDGKPIGYITIMDLAYAFTTFIENIPEKHRKERIEELVVRDYYKRNLPVVSEEAEIYKAARILYG EKTRGVLVLNNEGKVSGVVREHDLIGYLALTILGITR >Mature_276_residues SLDEFIEKTPATLDKNDSLINYVRLLKKTGNDKVVILENKRINEKYVKNIAGVVSSRDVVGKIATERLRLSSPGRLRVSG FMSIQPLIARLDTPLSDIVKTMASKSIGILPIVGNEGLEGAIYRWSLLKLAESITDPVSKIVKKDYLKIRVDDSLLMLRQ GMLNRDESFAVVVGEDGKPIGYITIMDLAYAFTTFIENIPEKHRKERIEELVVRDYYKRNLPVVSEEAEIYKAARILYGE KTRGVLVLNNEGKVSGVVREHDLIGYLALTILGITR
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31136; Mature: 31005
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDEFIEKTPATLDKNDSLINYVRLLKKTGNDKVVILENKRINEKYVKNIAGVVSSRDV CCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCHHH VGKIATERLRLSSPGRLRVSGFMSIQPLIARLDTPLSDIVKTMASKSIGILPIVGNEGLE HHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCC GAIYRWSLLKLAESITDPVSKIVKKDYLKIRVDDSLLMLRQGMLNRDESFAVVVGEDGKP CHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCCCCCEEEEECCCCCC IGYITIMDLAYAFTTFIENIPEKHRKERIEELVVRDYYKRNLPVVSEEAEIYKAARILYG EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC EKTRGVLVLNNEGKVSGVVREHDLIGYLALTILGITR CCCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLDEFIEKTPATLDKNDSLINYVRLLKKTGNDKVVILENKRINEKYVKNIAGVVSSRDV CHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCHHH VGKIATERLRLSSPGRLRVSGFMSIQPLIARLDTPLSDIVKTMASKSIGILPIVGNEGLE HHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCC GAIYRWSLLKLAESITDPVSKIVKKDYLKIRVDDSLLMLRQGMLNRDESFAVVVGEDGKP CHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCCCCCEEEEECCCCCC IGYITIMDLAYAFTTFIENIPEKHRKERIEELVVRDYYKRNLPVVSEEAEIYKAARILYG EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC EKTRGVLVLNNEGKVSGVVREHDLIGYLALTILGITR CCCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA