Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884781

Identifier: 218884781

GI number: 218884781

Start: 1360669

End: 1361217

Strand: Reverse

Name: 218884781

Synonym: DKAM_1470

Alternate gene names: NA

Gene position: 1361217-1360669 (Counterclockwise)

Preceding gene: 218884782

Following gene: 218884780

Centisome position: 99.71

GC content: 43.9

Gene sequence:

>549_bases
ATGAGCAGTGAGCAGAAATTCATCGTAGACGCTATGCTAGGCTCCCTGGCGAGATGGCTTAGAATACTGGGCTATGATAC
CGTTTACGGGAATAAAATGGAGGATTGGTTGATACTTAGGAGGGCGGAGCTAGAGGGTAGGATAATACTTACAAGAGATA
GGAGCTTACATCATAAAGCATTGAAGAGGGGGTTGAAAAGTATTCTTCTACAGGATGAGGACCTAGCTGCCATGCTGGCC
AGGATAGCGGGATTAACAGGCATAAGACTCTACGTGGACTATGAGAAGACAAGATGCCCCGAAGACAATACACTCTTAAG
GAAAACAGATAAGAGCGAAGTAAAGGATAAGGTTCCTCCAAGAGTATACAGTATACATGAAGACTTCTGGATTTGCCCGC
GCTGTGGTAAAGTATATTGGGTAGGAAACCACTGGAGAATGATTGAGATGATACTGAGTGATGCAAGGAAGAAGCTGAGC
ATGTTTCAAAAACAATTTGAGAAGGGGATGATTAGTGAACACAGTGCACCCTTCAGAGTTAACCTTTGA

Upstream 100 bases:

>100_bases
GTGGCGTATTAGTATTAAATAATGAGGGTAAGGTAAGCGGCGTAGTAAGAGAGCATGATTTAATAGGTTATCTAGCCTTA
ACAATCCTGGGTATAACAAG

Downstream 100 bases:

>100_bases
AGAAGGGGTTCTCCTAGTTAAGATAGCAAGGAAAGCAATAGAGGCATATGTGACAAAGGGGGAGCACATAGATGCTGCAA
ATTATGCTGTAATTAGTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MSSEQKFIVDAMLGSLARWLRILGYDTVYGNKMEDWLILRRAELEGRIILTRDRSLHHKALKRGLKSILLQDEDLAAMLA
RIAGLTGIRLYVDYEKTRCPEDNTLLRKTDKSEVKDKVPPRVYSIHEDFWICPRCGKVYWVGNHWRMIEMILSDARKKLS
MFQKQFEKGMISEHSAPFRVNL

Sequences:

>Translated_182_residues
MSSEQKFIVDAMLGSLARWLRILGYDTVYGNKMEDWLILRRAELEGRIILTRDRSLHHKALKRGLKSILLQDEDLAAMLA
RIAGLTGIRLYVDYEKTRCPEDNTLLRKTDKSEVKDKVPPRVYSIHEDFWICPRCGKVYWVGNHWRMIEMILSDARKKLS
MFQKQFEKGMISEHSAPFRVNL
>Mature_181_residues
SSEQKFIVDAMLGSLARWLRILGYDTVYGNKMEDWLILRRAELEGRIILTRDRSLHHKALKRGLKSILLQDEDLAAMLAR
IAGLTGIRLYVDYEKTRCPEDNTLLRKTDKSEVKDKVPPRVYSIHEDFWICPRCGKVYWVGNHWRMIEMILSDARKKLSM
FQKQFEKGMISEHSAPFRVNL

Specific function: Unknown

COG id: COG1656

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21370; Mature: 21239

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSEQKFIVDAMLGSLARWLRILGYDTVYGNKMEDWLILRRAELEGRIILTRDRSLHHKA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHH
LKRGLKSILLQDEDLAAMLARIAGLTGIRLYVDYEKTRCPEDNTLLRKTDKSEVKDKVPP
HHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEEEHHHCCCCCCCEECCCCHHHHHHCCCC
RVYSIHEDFWICPRCGKVYWVGNHWRMIEMILSDARKKLSMFQKQFEKGMISEHSAPFRV
CEEEECCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
NL
CC
>Mature Secondary Structure 
SSEQKFIVDAMLGSLARWLRILGYDTVYGNKMEDWLILRRAELEGRIILTRDRSLHHKA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHH
LKRGLKSILLQDEDLAAMLARIAGLTGIRLYVDYEKTRCPEDNTLLRKTDKSEVKDKVPP
HHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEEEHHHCCCCCCCEECCCCHHHHHHCCCC
RVYSIHEDFWICPRCGKVYWVGNHWRMIEMILSDARKKLSMFQKQFEKGMISEHSAPFRV
CEEEECCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
NL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA