Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884753

Identifier: 218884753

GI number: 218884753

Start: 1334220

End: 1335008

Strand: Reverse

Name: 218884753

Synonym: DKAM_1442

Alternate gene names: NA

Gene position: 1335008-1334220 (Counterclockwise)

Preceding gene: 218884755

Following gene: 218884752

Centisome position: 97.79

GC content: 42.59

Gene sequence:

>789_bases
TTGACACCGTTACAGGACACAGTATATGTTAAATTAGGAGGCAGCTTCATAACCATAAAAGACAAGCCTGTCACACTCAG
GAGAGAATCCCTCGATGCTGTGGCAGAGATCTTAAGGCAAGTATATGGTAGGGTAAAACTTATACTAGGGAATGGAGGGG
GAAGCTTCGCTCACTATGCTGTGAGAAAGTATTGTGGAGACGGACGAATCGATTGTGTTGTGAAATGTCACCAGGCAACA
AGGTTATTGAATAGGATAATCACAGATCACCTTGTCGAGGCCGGTATACCTGTATCAAGTATTCAAACAAGTGCGGTGAT
CACGGTAAGCCAGGATGGGGAATTCAAGGTTTTCTCGGAACCGGTGTACAATTTTATCTCGGCTGGACTCATACCGCTTC
TATACGGGGAATGCATACCATGGGGCAATGGATACCATGTGGTATCCACTGAGAAAGTATTCGAATTACTTGCAGAAAGC
ATTAAACCAGCACGCATTGTGCTTTTAACAGATGTTAAAGGAGTATATACTTGTAACCCTTCCAGGTGTAGTGATCCGGT
TTTAATTAAATCTATAAATAAGAATAATATCAGTCAAGTCCTTGAGCAACTTAGCAAAGAGAAGAATAATGATGCAACGG
GTGGGATATATGGTAAGGTGAAATCAATGCATGAGTTATCTGAGAGACTAGGGGTTAGAGTGATCATAGCGTCCGGCTTC
AGTAGGCAGGACGTTGTTAACGCTATTCTACATGGAGATATCTCCGAGGGTACTATAATAGAGCCATAG

Upstream 100 bases:

>100_bases
ATTAGAGGCACCGCCGAATACTATTACTCAATAATGCTAGGAAAAACAATAAAATGTTTTACCTGTGTTTCCAATACTTG
AAACGCGAAGGGTGCACGAA

Downstream 100 bases:

>100_bases
CTTCAACATCAGAAGCCTGGTGTATGTCATCGCCAAAGCGGCTACACGCTTTTAACCATCATCATCGATTAATACTACAT
GGCAAACTCGTTTAAATACC

Product: aspartate/glutamate/uridylate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MTPLQDTVYVKLGGSFITIKDKPVTLRRESLDAVAEILRQVYGRVKLILGNGGGSFAHYAVRKYCGDGRIDCVVKCHQAT
RLLNRIITDHLVEAGIPVSSIQTSAVITVSQDGEFKVFSEPVYNFISAGLIPLLYGECIPWGNGYHVVSTEKVFELLAES
IKPARIVLLTDVKGVYTCNPSRCSDPVLIKSINKNNISQVLEQLSKEKNNDATGGIYGKVKSMHELSERLGVRVIIASGF
SRQDVVNAILHGDISEGTIIEP

Sequences:

>Translated_262_residues
MTPLQDTVYVKLGGSFITIKDKPVTLRRESLDAVAEILRQVYGRVKLILGNGGGSFAHYAVRKYCGDGRIDCVVKCHQAT
RLLNRIITDHLVEAGIPVSSIQTSAVITVSQDGEFKVFSEPVYNFISAGLIPLLYGECIPWGNGYHVVSTEKVFELLAES
IKPARIVLLTDVKGVYTCNPSRCSDPVLIKSINKNNISQVLEQLSKEKNNDATGGIYGKVKSMHELSERLGVRVIIASGF
SRQDVVNAILHGDISEGTIIEP
>Mature_261_residues
TPLQDTVYVKLGGSFITIKDKPVTLRRESLDAVAEILRQVYGRVKLILGNGGGSFAHYAVRKYCGDGRIDCVVKCHQATR
LLNRIITDHLVEAGIPVSSIQTSAVITVSQDGEFKVFSEPVYNFISAGLIPLLYGECIPWGNGYHVVSTEKVFELLAESI
KPARIVLLTDVKGVYTCNPSRCSDPVLIKSINKNNISQVLEQLSKEKNNDATGGIYGKVKSMHELSERLGVRVIIASGFS
RQDVVNAILHGDISEGTIIEP

Specific function: Unknown

COG id: COG1608

COG function: function code R; Predicted archaeal kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001048
- InterPro:   IPR001057 [H]

Pfam domain/function: PF00696 AA_kinase [H]

EC number: NA

Molecular weight: Translated: 28644; Mature: 28513

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: PS00107 PROTEIN_KINASE_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPLQDTVYVKLGGSFITIKDKPVTLRRESLDAVAEILRQVYGRVKLILGNGGGSFAHYA
CCCCCCEEEEEECCEEEEEECCCCEEHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHH
VRKYCGDGRIDCVVKCHQATRLLNRIITDHLVEAGIPVSSIQTSAVITVSQDGEFKVFSE
HHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEECCCCEEEEHH
PVYNFISAGLIPLLYGECIPWGNGYHVVSTEKVFELLAESIKPARIVLLTDVKGVYTCNP
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCCEEEEEEECCCEEEEECC
SRCSDPVLIKSINKNNISQVLEQLSKEKNNDATGGIYGKVKSMHELSERLGVRVIIASGF
CCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCC
SRQDVVNAILHGDISEGTIIEP
CHHHHHHHHHCCCCCCCCEECC
>Mature Secondary Structure 
TPLQDTVYVKLGGSFITIKDKPVTLRRESLDAVAEILRQVYGRVKLILGNGGGSFAHYA
CCCCCEEEEEECCEEEEEECCCCEEHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHH
VRKYCGDGRIDCVVKCHQATRLLNRIITDHLVEAGIPVSSIQTSAVITVSQDGEFKVFSE
HHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEECCCCEEEEHH
PVYNFISAGLIPLLYGECIPWGNGYHVVSTEKVFELLAESIKPARIVLLTDVKGVYTCNP
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCCEEEEEEECCCEEEEECC
SRCSDPVLIKSINKNNISQVLEQLSKEKNNDATGGIYGKVKSMHELSERLGVRVIIASGF
CCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCC
SRQDVVNAILHGDISEGTIIEP
CHHHHHHHHHCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]