| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884701
Identifier: 218884701
GI number: 218884701
Start: 1292396
End: 1292962
Strand: Reverse
Name: 218884701
Synonym: DKAM_1390
Alternate gene names: NA
Gene position: 1292962-1292396 (Counterclockwise)
Preceding gene: 218884703
Following gene: 218884700
Centisome position: 94.71
GC content: 46.56
Gene sequence:
>567_bases ATGGTGGTAGGCTTGATAACCGAGCAGGAGGCATTAAAGAAAGCCGTTGAAACCACCGCATCACTAATGCTGGCATCAGC TAAGACAGCGCCTAAGGCACGGGGCATAGACAACATAGTATCAGCCATTATAACCGGGAAACGGGAGTTAGAGACGCTGG CAGAGTACATGAAGAAGCTCGCAGAAAAGTACGGTGCGTTCTTCGAGAGAGATGCTGAGAACGTGTTGAATAGCGACGCG GTAGTACTAATAGGCTGTAAAATAGCGAGGCTCAACCTAGCTAAGCCGGAGAAATGGGTGCTCGACGCAGACACCGTTAA CTCAATAGTAAACCTGGGCATAGCACTAGGTTCAGCAGTCAAGACTGCATCAATGCTAAACATAGACAATAGGATAATGT ACTCTATAGGCGTGGCGGCTCAGGAACTGGGATTAATAGACGCTGACATCGTATACGGGATACCATTATCAGTTAAAGGC AAGAACATATACTTCGACAGGAAATTCCCAAGTAACCCAGTGAACCCTGGAGACTTGTTTTCAACATACCTAAACCACAC AATATGA
Upstream 100 bases:
>100_bases CCATGTACATGGTTTACAAATATAGCACAGTAATCAAGGAACTAGGGGATCGGCATGGAGACCAGTATATATTCTTGAGG GTAGATCTATATAGTGTAAC
Downstream 100 bases:
>100_bases TCTCACTTATACTGGGTGAAATATTACTTAGTTGATTCAAAAACACCCGGGAACCAGTTCCAAAATATATAGATACCAAG TAACCAATAAATTTCAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MVVGLITEQEALKKAVETTASLMLASAKTAPKARGIDNIVSAIITGKRELETLAEYMKKLAEKYGAFFERDAENVLNSDA VVLIGCKIARLNLAKPEKWVLDADTVNSIVNLGIALGSAVKTASMLNIDNRIMYSIGVAAQELGLIDADIVYGIPLSVKG KNIYFDRKFPSNPVNPGDLFSTYLNHTI
Sequences:
>Translated_188_residues MVVGLITEQEALKKAVETTASLMLASAKTAPKARGIDNIVSAIITGKRELETLAEYMKKLAEKYGAFFERDAENVLNSDA VVLIGCKIARLNLAKPEKWVLDADTVNSIVNLGIALGSAVKTASMLNIDNRIMYSIGVAAQELGLIDADIVYGIPLSVKG KNIYFDRKFPSNPVNPGDLFSTYLNHTI >Mature_188_residues MVVGLITEQEALKKAVETTASLMLASAKTAPKARGIDNIVSAIITGKRELETLAEYMKKLAEKYGAFFERDAENVLNSDA VVLIGCKIARLNLAKPEKWVLDADTVNSIVNLGIALGSAVKTASMLNIDNRIMYSIGVAAQELGLIDADIVYGIPLSVKG KNIYFDRKFPSNPVNPGDLFSTYLNHTI
Specific function: Unknown
COG id: COG4739
COG function: function code S; Uncharacterized protein containing a ferredoxin domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019224 [H]
Pfam domain/function: PF09918 DUF2148 [H]
EC number: NA
Molecular weight: Translated: 20346; Mature: 20346
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVGLITEQEALKKAVETTASLMLASAKTAPKARGIDNIVSAIITGKRELETLAEYMKKL CEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH AEKYGAFFERDAENVLNSDAVVLIGCKIARLNLAKPEKWVLDADTVNSIVNLGIALGSAV HHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHH KTASMLNIDNRIMYSIGVAAQELGLIDADIVYGIPLSVKGKNIYFDRKFPSNPVNPGDLF HHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCEEECCCEEEEECCCCCCCCCHHHHH STYLNHTI HHHHHCCC >Mature Secondary Structure MVVGLITEQEALKKAVETTASLMLASAKTAPKARGIDNIVSAIITGKRELETLAEYMKKL CEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH AEKYGAFFERDAENVLNSDAVVLIGCKIARLNLAKPEKWVLDADTVNSIVNLGIALGSAV HHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHH KTASMLNIDNRIMYSIGVAAQELGLIDADIVYGIPLSVKGKNIYFDRKFPSNPVNPGDLF HHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCEEECCCEEEEECCCCCCCCCHHHHH STYLNHTI HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]