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The map label for this gene is 218884668

Identifier: 218884668

GI number: 218884668

Start: 1262390

End: 1263241

Strand: Reverse

Name: 218884668

Synonym: DKAM_1357

Alternate gene names: NA

Gene position: 1263241-1262390 (Counterclockwise)

Preceding gene: 218884669

Following gene: 218884667

Centisome position: 92.53

GC content: 43.78

Gene sequence:

>852_bases
TTGAAGAAGAGGAGTCCTATAGTAGCCGGGTATTTTTACCCTGATAAACCTGGGGAGTTAAGAAGCGTGATAGAGTGGTC
TTTCAAACATGGGATCGGACCCGGGAAGCCACCGAGTCCCTCAGATATCCCGGCCACGAATTCAATAGGCTATGTAGCCC
CTCATGCAGGCTATATTTACAGCGGCCCTGTAGCTGCACACGTCTACTTTGATATGGCTTTAAATAAGAAGCCTGATACC
ATAGTGATACTTGGTACAAATCACACAGGTCTTGGAAGACCTGTTTCAGTGTATCCTGAGGGAGTATGGGAGACCCCCCT
TGGAGACCTTGTTGTAGACAGTGAGATTGGAAGACTTATTGTGGAGAACAGTGAAATCGCTGAGTTTGATGAATATGCTC
ATTTAGAGGAGCACTCAATTGAGGTCCAACTGCCATTTATAGTGTACATCTATGGCGAGGATGTGAAAATAACCCCGATA
GTTATAGGTATCCATACACCAGATATAGCAAGAGACCTAGCGAAGTCGATATATGAAGCATCAATGTCAACCGGTAAGAG
AATAATAGTGATAGCAAGCAGCGACTTCAATCATTACGAACCCCATGAAGAGACAAGCAGGAAGGATTCGATGGCCATAG
ATAGAATACTAAAACTCGACACAGATGGATTATACAATGTAATACTGCATAACGACATAAGTATCTGTGGACCAGGAGGA
ATAATGACCCTCATGGAATACACTAAAAAATTGGGAGGGAAAGCCCAGCTATTGAAATACGCGACAAGTGGTGACACCTC
CGGGGATTACTCACACGTAGTTGGCTACGCTGCTTTAAAGTTTTATATTTAG

Upstream 100 bases:

>100_bases
AAATTTTTCGTAGGCATCCAGGACCATATTTCTAGGCTTATTCCATAATGCTTCAAGGTATTTAACTCGTAGTTAACAGT
TATTATTCAAGGGGAGCAGG

Downstream 100 bases:

>100_bases
TGAGTGCTAAGCTAATATGCCGGCTTATATATTTAAGGAAGGTTGTATTAAGCATGGATGAGATACAGAATAGGAAACTA
CACCATATAAGGTTAGCACT

Product: putative dioxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKKRSPIVAGYFYPDKPGELRSVIEWSFKHGIGPGKPPSPSDIPATNSIGYVAPHAGYIYSGPVAAHVYFDMALNKKPDT
IVILGTNHTGLGRPVSVYPEGVWETPLGDLVVDSEIGRLIVENSEIAEFDEYAHLEEHSIEVQLPFIVYIYGEDVKITPI
VIGIHTPDIARDLAKSIYEASMSTGKRIIVIASSDFNHYEPHEETSRKDSMAIDRILKLDTDGLYNVILHNDISICGPGG
IMTLMEYTKKLGGKAQLLKYATSGDTSGDYSHVVGYAALKFYI

Sequences:

>Translated_283_residues
MKKRSPIVAGYFYPDKPGELRSVIEWSFKHGIGPGKPPSPSDIPATNSIGYVAPHAGYIYSGPVAAHVYFDMALNKKPDT
IVILGTNHTGLGRPVSVYPEGVWETPLGDLVVDSEIGRLIVENSEIAEFDEYAHLEEHSIEVQLPFIVYIYGEDVKITPI
VIGIHTPDIARDLAKSIYEASMSTGKRIIVIASSDFNHYEPHEETSRKDSMAIDRILKLDTDGLYNVILHNDISICGPGG
IMTLMEYTKKLGGKAQLLKYATSGDTSGDYSHVVGYAALKFYI
>Mature_283_residues
MKKRSPIVAGYFYPDKPGELRSVIEWSFKHGIGPGKPPSPSDIPATNSIGYVAPHAGYIYSGPVAAHVYFDMALNKKPDT
IVILGTNHTGLGRPVSVYPEGVWETPLGDLVVDSEIGRLIVENSEIAEFDEYAHLEEHSIEVQLPFIVYIYGEDVKITPI
VIGIHTPDIARDLAKSIYEASMSTGKRIIVIASSDFNHYEPHEETSRKDSMAIDRILKLDTDGLYNVILHNDISICGPGG
IMTLMEYTKKLGGKAQLLKYATSGDTSGDYSHVVGYAALKFYI

Specific function: Unknown

COG id: COG1355

COG function: function code R; Predicted dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0103 family

Homologues:

Organism=Homo sapiens, GI7705720, Length=252, Percent_Identity=26.5873015873016, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI25146594, Length=211, Percent_Identity=27.4881516587678, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI32566861, Length=262, Percent_Identity=26.3358778625954, Blast_Score=80, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6322467, Length=213, Percent_Identity=28.6384976525822, Blast_Score=76, Evalue=6e-15,
Organism=Drosophila melanogaster, GI21357419, Length=304, Percent_Identity=25.9868421052632, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1357_DESK1 (B8D6F2)

Other databases:

- EMBL:   CP001140
- RefSeq:   YP_002429050.1
- GeneID:   7171402
- GenomeReviews:   CP001140_GR
- KEGG:   dka:DKAM_1357
- HOGENOM:   HBG575564
- OMA:   GPNHTGY
- ProtClustDB:   CLSK2399586
- HAMAP:   MF_00055
- InterPro:   IPR020619
- InterPro:   IPR002737
- PANTHER:   PTHR11060

Pfam domain/function: PF01875 Memo

EC number: NA

Molecular weight: Translated: 31103; Mature: 31103

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRSPIVAGYFYPDKPGELRSVIEWSFKHGIGPGKPPSPSDIPATNSIGYVAPHAGYIY
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCEEE
SGPVAAHVYFDMALNKKPDTIVILGTNHTGLGRPVSVYPEGVWETPLGDLVVDSEIGRLI
CCCEEEEEEEEEEECCCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCEEECCCCCEEE
VENSEIAEFDEYAHLEEHSIEVQLPFIVYIYGEDVKITPIVIGIHTPDIARDLAKSIYEA
ECCCCHHHHHHHHCHHHCCEEEEEEEEEEEECCCEEEEEEEEEECCCHHHHHHHHHHHHH
SMSTGKRIIVIASSDFNHYEPHEETSRKDSMAIDRILKLDTDGLYNVILHNDISICGPGG
HHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEECCCH
IMTLMEYTKKLGGKAQLLKYATSGDTSGDYSHVVGYAALKFYI
HHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHEEEEEEEC
>Mature Secondary Structure
MKKRSPIVAGYFYPDKPGELRSVIEWSFKHGIGPGKPPSPSDIPATNSIGYVAPHAGYIY
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCEEE
SGPVAAHVYFDMALNKKPDTIVILGTNHTGLGRPVSVYPEGVWETPLGDLVVDSEIGRLI
CCCEEEEEEEEEEECCCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCEEECCCCCEEE
VENSEIAEFDEYAHLEEHSIEVQLPFIVYIYGEDVKITPIVIGIHTPDIARDLAKSIYEA
ECCCCHHHHHHHHCHHHCCEEEEEEEEEEEECCCEEEEEEEEEECCCHHHHHHHHHHHHH
SMSTGKRIIVIASSDFNHYEPHEETSRKDSMAIDRILKLDTDGLYNVILHNDISICGPGG
HHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEECCCH
IMTLMEYTKKLGGKAQLLKYATSGDTSGDYSHVVGYAALKFYI
HHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA