| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884614
Identifier: 218884614
GI number: 218884614
Start: 1219952
End: 1220437
Strand: Reverse
Name: 218884614
Synonym: DKAM_1303
Alternate gene names: NA
Gene position: 1220437-1219952 (Counterclockwise)
Preceding gene: 218884615
Following gene: 218884612
Centisome position: 89.39
GC content: 40.53
Gene sequence:
>486_bases GTGATTGTTGCTGCTCTTGACCCAATGGATCCTAGAAGAGATGAGGCAAGAAAAACTCTAGAAACCCATGAAGATAAAGT AGTGTCTGAGCTAGTGGTAACTGAACTTGCAAGCATACTTGCTAGACAACATAACCTACTTACCACTGTAAAAGATAAGC TAGAAATAAGTGAGCGTGTCACACTCATAGCCATTATCCTGTATATTATGAAAAGGTTTAACTTTAGGTATATCAATGTG AAAGGGTCTTCGAGAAGCCCAATTGGTCGATTCTATAAGCCCTTGGCGTATGGGATAGAATTAACAGGGAAATTGAGGCT TAAAACACTTGATCTACTTCACCTGGCTTACATTAAGGCCATGAAAGAACAAGGTGCACAGATACACGCTCTACTAACAG CTGATGCGGACTTTAAAAACAGCGAAGAAGACATTAGGAAAGCTCTTGGAATAACGATTAAACTATTGTCCTCCTCCCCG TCCTGA
Upstream 100 bases:
>100_bases GGAAGATGAGGGGGATATACCGATTAAACTCGAAGGTTCTCTGAAACAGTTACTAGCTGAACGGGAGAGGTTTTAAGCCT TGATCTACGTTGACACAAGT
Downstream 100 bases:
>100_bases AGTAGTGAAGATCCCTTGAATGATTCATCGGTTTCCCGCATCTATTCCGGGTTACATCTGTAACTATAATCGGTAGGTTG TTTCATCGAATAACGAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MIVAALDPMDPRRDEARKTLETHEDKVVSELVVTELASILARQHNLLTTVKDKLEISERVTLIAIILYIMKRFNFRYINV KGSSRSPIGRFYKPLAYGIELTGKLRLKTLDLLHLAYIKAMKEQGAQIHALLTADADFKNSEEDIRKALGITIKLLSSSP S
Sequences:
>Translated_161_residues MIVAALDPMDPRRDEARKTLETHEDKVVSELVVTELASILARQHNLLTTVKDKLEISERVTLIAIILYIMKRFNFRYINV KGSSRSPIGRFYKPLAYGIELTGKLRLKTLDLLHLAYIKAMKEQGAQIHALLTADADFKNSEEDIRKALGITIKLLSSSP S >Mature_161_residues MIVAALDPMDPRRDEARKTLETHEDKVVSELVVTELASILARQHNLLTTVKDKLEISERVTLIAIILYIMKRFNFRYINV KGSSRSPIGRFYKPLAYGIELTGKLRLKTLDLLHLAYIKAMKEQGAQIHALLTADADFKNSEEDIRKALGITIKLLSSSP S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18191; Mature: 18191
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVAALDPMDPRRDEARKTLETHEDKVVSELVVTELASILARQHNLLTTVKDKLEISERV CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLIAIILYIMKRFNFRYINVKGSSRSPIGRFYKPLAYGIELTGKLRLKTLDLLHLAYIKA HHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCEEEECEEEHHHHHHHHHHHHHH MKEQGAQIHALLTADADFKNSEEDIRKALGITIKLLSSSPS HHHCCCEEEEEEEECCCCCCCHHHHHHHHHHEEEEECCCCC >Mature Secondary Structure MIVAALDPMDPRRDEARKTLETHEDKVVSELVVTELASILARQHNLLTTVKDKLEISERV CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLIAIILYIMKRFNFRYINVKGSSRSPIGRFYKPLAYGIELTGKLRLKTLDLLHLAYIKA HHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCEEEECEEEHHHHHHHHHHHHHH MKEQGAQIHALLTADADFKNSEEDIRKALGITIKLLSSSPS HHHCCCEEEEEEEECCCCCCCHHHHHHHHHHEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA