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The map label for this gene is 218884608

Identifier: 218884608

GI number: 218884608

Start: 1215338

End: 1216054

Strand: Reverse

Name: 218884608

Synonym: DKAM_1297

Alternate gene names: NA

Gene position: 1216054-1215338 (Counterclockwise)

Preceding gene: 218884612

Following gene: 218884606

Centisome position: 89.07

GC content: 43.51

Gene sequence:

>717_bases
TTGAAGAGGATTCAACCACAGACAACACCCGAATTTAGAGAAGTAGTATACACTCCAGACCACTGGGAACTACTTAAGAA
GCTCAGGGAGAAAGCAGTAGAATTACTAAAGATATTCGTGGACAACGGGTTAAACGCTTACGTTCATGGTAGTATAGCCA
GGGGTGATGTATGGAGAGGAAGCGATATAGATGTATTTATCCCGGACACCATACCCAGCTATATTATTGAGACAATACTA
GAGAAACATGGTGTTAAACCCTATGAACGCGTAATAATAATGGCTACCCCATCAAACACGCCTAAGGCATACATAATCCT
TGACCAAGAGGAAAGAATAAGCGTGAGCTTTCCCCTATTGAAGCTCAAGCCGAGGGAATACGAGTTCTATAGATTTGGAG
GTGTACTAGGCTACAACGGAATATTAGAGGGTAAGAGAGTCCCCGGCGTTAACAAGTCACTTATATTCATAGATCCCACT
ATTAAAGGACATTATGAACTACCTGTGAAAGGCTTCGAGGAATACGTTGCAAGGAGGCTCGATATAAGCATAGAGACCGT
GCTGGAAAGAGAGAGAGTCTTAACCAGGAGAAGCAGTATAGGGAGAACAGGTGTCTTCATCAAGTATTACCTGGCATCCG
ATGAAACATTCGAGGACGCGTTGAGAGAGCTATCGCGAGAGAATGGCGTGTTAAGGAGAATGCTCTCCACGAAATAA

Upstream 100 bases:

>100_bases
ACTCATATATGATAAATTGAGTCAGTCGCCAATATATAAAACGAGAATAAGGAGATCAAACAGTATAGAAGGCATTAAGG
GTATTAAACGGTGCCAGCCT

Downstream 100 bases:

>100_bases
CCTATACCTGAGCACTGCTATTACCCCGCCGAACCCTTGGACCTCGAGGCCTACATCGCTTTTCCCGGGGACTATTATCA
CCTCTGCACCGGTTTCATAT

Product: DNA polymerase, beta domain-containing protein region

Products: NA

Alternate protein names: DNA Polymerase Beta Domain Protein Region; DNA Polymerase Beta Subunit; DNA Polymerase Beta Domain-Containing Protein; Nucleotidyltransferase-Like Protein; DNA Polymerase Beta Family Nucleotidyltransferase; DNA Polymerase Beta Superfamily Nucleotidyltransferase

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKRIQPQTTPEFREVVYTPDHWELLKKLREKAVELLKIFVDNGLNAYVHGSIARGDVWRGSDIDVFIPDTIPSYIIETIL
EKHGVKPYERVIIMATPSNTPKAYIILDQEERISVSFPLLKLKPREYEFYRFGGVLGYNGILEGKRVPGVNKSLIFIDPT
IKGHYELPVKGFEEYVARRLDISIETVLERERVLTRRSSIGRTGVFIKYYLASDETFEDALRELSRENGVLRRMLSTK

Sequences:

>Translated_238_residues
MKRIQPQTTPEFREVVYTPDHWELLKKLREKAVELLKIFVDNGLNAYVHGSIARGDVWRGSDIDVFIPDTIPSYIIETIL
EKHGVKPYERVIIMATPSNTPKAYIILDQEERISVSFPLLKLKPREYEFYRFGGVLGYNGILEGKRVPGVNKSLIFIDPT
IKGHYELPVKGFEEYVARRLDISIETVLERERVLTRRSSIGRTGVFIKYYLASDETFEDALRELSRENGVLRRMLSTK
>Mature_238_residues
MKRIQPQTTPEFREVVYTPDHWELLKKLREKAVELLKIFVDNGLNAYVHGSIARGDVWRGSDIDVFIPDTIPSYIIETIL
EKHGVKPYERVIIMATPSNTPKAYIILDQEERISVSFPLLKLKPREYEFYRFGGVLGYNGILEGKRVPGVNKSLIFIDPT
IKGHYELPVKGFEEYVARRLDISIETVLERERVLTRRSSIGRTGVFIKYYLASDETFEDALRELSRENGVLRRMLSTK

Specific function: Unknown

COG id: COG2413

COG function: function code R; Predicted nucleotidyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27564; Mature: 27564

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIQPQTTPEFREVVYTPDHWELLKKLREKAVELLKIFVDNGLNAYVHGSIARGDVWRG
CCCCCCCCCHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCC
SDIDVFIPDTIPSYIIETILEKHGVKPYERVIIMATPSNTPKAYIILDQEERISVSFPLL
CCCEEEECCCHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCEEEEEECCCCCEEEECCEE
KLKPREYEFYRFGGVLGYNGILEGKRVPGVNKSLIFIDPTIKGHYELPVKGFEEYVARRL
EECCCCEEEEEECCEECCCCEECCCCCCCCCCEEEEEECCCCCCEECCCHHHHHHHHHHH
DISIETVLERERVLTRRSSIGRTGVFIKYYLASDETFEDALRELSRENGVLRRMLSTK
CCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRIQPQTTPEFREVVYTPDHWELLKKLREKAVELLKIFVDNGLNAYVHGSIARGDVWRG
CCCCCCCCCHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCC
SDIDVFIPDTIPSYIIETILEKHGVKPYERVIIMATPSNTPKAYIILDQEERISVSFPLL
CCCEEEECCCHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCEEEEEECCCCCEEEECCEE
KLKPREYEFYRFGGVLGYNGILEGKRVPGVNKSLIFIDPTIKGHYELPVKGFEEYVARRL
EECCCCEEEEEECCEECCCCEECCCCCCCCCCEEEEEECCCCCCEECCCHHHHHHHHHHH
DISIETVLERERVLTRRSSIGRTGVFIKYYLASDETFEDALRELSRENGVLRRMLSTK
CCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA