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The map label for this gene is sufB [C]

Identifier: 218884519

GI number: 218884519

Start: 1129620

End: 1130393

Strand: Reverse

Name: sufB [C]

Synonym: DKAM_1208

Alternate gene names: 218884519

Gene position: 1130393-1129620 (Counterclockwise)

Preceding gene: 218884520

Following gene: 218884515

Centisome position: 82.8

GC content: 61.24

Gene sequence:

>774_bases
ATGTACACGAGGCCTGGTGACGTAGTGCTAGACCCCATGGTGGGTAGCGGGACTACGCTGATAGAGGCGAAGCTCCTGGG
TAGGAACTCGATCGACGTCGACATAAACTACAACGCGGTCATGCTCGCGCTCCACAGGCTCTACTACCTCGAGAAGGCCC
TCGCGGATTACTTGAAGAGGTTGGGGGAGCGGGCCGGGGCGGGAGGCGGAGGTGCGGGCCCAGCCTTCGGGGACGCGACG
CCGGAGGACGTGGAGAGGACCTGGTACAAGGTATACCACGGCGATGCTAGGAGGCTGAGCCTCCTCGAGAGCGAGAGCGT
CGACCTGGTCGCCACGCACCCGCCGTACTTCAATATTATAGAATACGGTGGTGCGGTCTACTTGAACGGGGATGAGGCGA
GCGCCGAGGTTGTGTCGAAAGCCCTCGCTAGGGAGGAGGCGAGAGTAGTCACGCGTGGCAGGCTCCACGCCAGGGGTAGG
GGGTCGAAGGGGCACCTGGAGTGCAGGGGGCTCATGCTTTCCGAAAAGGCCTACATGTTGGCGGTCCCCGAGCTGTCCTC
GGACACTCTGGACGCGACCCTCACACACGAAGCATCCATCGGCAGGCTGGCCGAGGAGGAAGTAAACTACTTGGTGAGCA
AGGGCTTCAAGAGAGACGAGGCGGTCAGCCTACTCGTGAAGGGGTTCATCAGCGTAGAGGAGAACGTGTTCCCCCCTAAG
GTGAGGGGGATCATCAGCAGCGTCGAGAAGCTAGTCGTCGAGAAGTCTTTCTGA

Upstream 100 bases:

>100_bases
TCGACAACGGTCTGGAGCTTCCCGGTCAGGGGGAGCTGGGCCACCCACAGGGGACTACAGGGGCAACTGGGCGCCGCAGA
TCCCCAGGGCGCTCATACCC

Downstream 100 bases:

>100_bases
AGAAGACCGCTCAGCCACCCTTCTTGCTTTCAAAATTCTCGAACAGCCCTTAGTCTCCCCGTCCCAAGACAAGGGGTAGG
CTCATACTACGCTCACGATC

Product: SufBD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MYTRPGDVVLDPMVGSGTTLIEAKLLGRNSIDVDINYNAVMLALHRLYYLEKALADYLKRLGERAGAGGGGAGPAFGDAT
PEDVERTWYKVYHGDARRLSLLESESVDLVATHPPYFNIIEYGGAVYLNGDEASAEVVSKALAREEARVVTRGRLHARGR
GSKGHLECRGLMLSEKAYMLAVPELSSDTLDATLTHEASIGRLAEEEVNYLVSKGFKRDEAVSLLVKGFISVEENVFPPK
VRGIISSVEKLVVEKSF

Sequences:

>Translated_257_residues
MYTRPGDVVLDPMVGSGTTLIEAKLLGRNSIDVDINYNAVMLALHRLYYLEKALADYLKRLGERAGAGGGGAGPAFGDAT
PEDVERTWYKVYHGDARRLSLLESESVDLVATHPPYFNIIEYGGAVYLNGDEASAEVVSKALAREEARVVTRGRLHARGR
GSKGHLECRGLMLSEKAYMLAVPELSSDTLDATLTHEASIGRLAEEEVNYLVSKGFKRDEAVSLLVKGFISVEENVFPPK
VRGIISSVEKLVVEKSF
>Mature_257_residues
MYTRPGDVVLDPMVGSGTTLIEAKLLGRNSIDVDINYNAVMLALHRLYYLEKALADYLKRLGERAGAGGGGAGPAFGDAT
PEDVERTWYKVYHGDARRLSLLESESVDLVATHPPYFNIIEYGGAVYLNGDEASAEVVSKALAREEARVVTRGRLHARGR
GSKGHLECRGLMLSEKAYMLAVPELSSDTLDATLTHEASIGRLAEEEVNYLVSKGFKRDEAVSLLVKGFISVEENVFPPK
VRGIISSVEKLVVEKSF

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 28046; Mature: 28046

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTRPGDVVLDPMVGSGTTLIEAKLLGRNSIDVDINYNAVMLALHRLYYLEKALADYLKR
CCCCCCCEEECCCCCCCCEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
LGERAGAGGGGAGPAFGDATPEDVERTWYKVYHGDARRLSLLESESVDLVATHPPYFNII
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEECCCCEEHE
EYGGAVYLNGDEASAEVVSKALAREEARVVTRGRLHARGRGSKGHLECRGLMLSEKAYML
ECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCEEEEEEEEECCEEEE
AVPELSSDTLDATLTHEASIGRLAEEEVNYLVSKGFKRDEAVSLLVKGFISVEENVFPPK
ECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHH
VRGIISSVEKLVVEKSF
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYTRPGDVVLDPMVGSGTTLIEAKLLGRNSIDVDINYNAVMLALHRLYYLEKALADYLKR
CCCCCCCEEECCCCCCCCEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
LGERAGAGGGGAGPAFGDATPEDVERTWYKVYHGDARRLSLLESESVDLVATHPPYFNII
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEECCCCEEHE
EYGGAVYLNGDEASAEVVSKALAREEARVVTRGRLHARGRGSKGHLECRGLMLSEKAYML
ECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCEEEEEEEEECCEEEE
AVPELSSDTLDATLTHEASIGRLAEEEVNYLVSKGFKRDEAVSLLVKGFISVEENVFPPK
ECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHH
VRGIISSVEKLVVEKSF
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]