| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884504
Identifier: 218884504
GI number: 218884504
Start: 1110645
End: 1111046
Strand: Reverse
Name: 218884504
Synonym: DKAM_1193
Alternate gene names: NA
Gene position: 1111046-1110645 (Counterclockwise)
Preceding gene: 218884507
Following gene: 218884503
Centisome position: 81.38
GC content: 46.02
Gene sequence:
>402_bases GTGGGGATCATGGATCTACATGAGACTAGATCCAGGCTCTCTGCGGACTCCACACTGGATAAACCCGGTCTGAGGAAGGA TATACTATCCCTTATTTACTCCTATAGATTCACTAAGATAAAGGTGAAGGGTGGAGGTAGGGAAGTATGGATCTATGGTG GCCCTGAGAGAGACTACGTGATCATACCTGAATCTTTCTGTAGTTGTATGGATTTCACTATCAGAGTTGTCTCCCGTGGG GAGACGCCATACTGTAAACACTTACTGGGGCTTGAGGTAGCACGTAGACTAGGTAAGTATAGGGAGATAGAGATGGAGGT GCAGGACGTAATCAAGGTTGTCAGGGAGGTGTTTGCCAAGGGATTCTCGAGGACTCTGCATAGAATACTATATAAATACT GA
Upstream 100 bases:
>100_bases AACTATATATTCCTTAAGGATGTATTAACAATTTTTATGGCGATATCCAGGTATCTAGGACTGGAGTGATTGGGAAATAT TATATACCTAGTAACAAGTC
Downstream 100 bases:
>100_bases GCTAATGGTTAGATTAATCGGTGAGTGATATGGGTAGAAGGAGGAAGAAGAGAAAGATTATCAAGAAGGCGGTAAGAATC CCCGTGCTCTTCCAGTGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MGIMDLHETRSRLSADSTLDKPGLRKDILSLIYSYRFTKIKVKGGGREVWIYGGPERDYVIIPESFCSCMDFTIRVVSRG ETPYCKHLLGLEVARRLGKYREIEMEVQDVIKVVREVFAKGFSRTLHRILYKY
Sequences:
>Translated_133_residues MGIMDLHETRSRLSADSTLDKPGLRKDILSLIYSYRFTKIKVKGGGREVWIYGGPERDYVIIPESFCSCMDFTIRVVSRG ETPYCKHLLGLEVARRLGKYREIEMEVQDVIKVVREVFAKGFSRTLHRILYKY >Mature_132_residues GIMDLHETRSRLSADSTLDKPGLRKDILSLIYSYRFTKIKVKGGGREVWIYGGPERDYVIIPESFCSCMDFTIRVVSRGE TPYCKHLLGLEVARRLGKYREIEMEVQDVIKVVREVFAKGFSRTLHRILYKY
Specific function: Unknown
COG id: COG5431
COG function: function code S; Uncharacterized metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15497; Mature: 15366
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS50966 ZF_SWIM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIMDLHETRSRLSADSTLDKPGLRKDILSLIYSYRFTKIKVKGGGREVWIYGGPERDYV CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCEEEEEEECCCCCEE IIPESFCSCMDFTIRVVSRGETPYCKHLLGLEVARRLGKYREIEMEVQDVIKVVREVFAK EECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH GFSRTLHRILYKY HHHHHHHHHHHCC >Mature Secondary Structure GIMDLHETRSRLSADSTLDKPGLRKDILSLIYSYRFTKIKVKGGGREVWIYGGPERDYV CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCEEEEEEECCCCCEE IIPESFCSCMDFTIRVVSRGETPYCKHLLGLEVARRLGKYREIEMEVQDVIKVVREVFAK EECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH GFSRTLHRILYKY HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA