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The map label for this gene is rplX [H]

Identifier: 218884420

GI number: 218884420

Start: 1047975

End: 1048235

Strand: Reverse

Name: rplX [H]

Synonym: DKAM_1109

Alternate gene names: 218884420

Gene position: 1048235-1047975 (Counterclockwise)

Preceding gene: 218884421

Following gene: 218884419

Centisome position: 76.78

GC content: 41.38

Gene sequence:

>261_bases
GTGGAGGTTAAAACATATAGGGTTACAGGCTACATGTTGATAAGCCATGATAGATACCCTACTTGGCAGAGGTTCACGAA
GGATGTAAGAGGTGTAAGTGAGAAAGAGGTGTTAGAGAAAGTATATTCTATACTGGGGAGTAACCATAAGGTGAAGAGGT
ATCATATAAGAATAGAGAGAATCGAGGAAATAGATCCAAGTGCCTCGAGGGATCCATTCATAAGACAGGTAGCAAACTCT
GAGAGGATTGTGAAGCCATGA

Upstream 100 bases:

>100_bases
AGAGTGGTTTATTAGCCAATAACCACGGTATAATTGTAGGAGGCAATACAACGGGTCCCGAGATACTTAGGATTAGAAAG
GGGTTTGGAGGTGGGGAGTA

Downstream 100 bases:

>100_bases
ACTCTGGGAGCGATGCTAAGGAAGTAAAGGAGGCTGGAAGGATTCAATTAGAGGAAATATTAGTGAGGTTTAACGAGTTA
AGAGAGTATGCCAATATACT

Product: 50S ribosomal protein LX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MEVKTYRVTGYMLISHDRYPTWQRFTKDVRGVSEKEVLEKVYSILGSNHKVKRYHIRIERIEEIDPSASRDPFIRQVANS
ERIVKP

Sequences:

>Translated_86_residues
MEVKTYRVTGYMLISHDRYPTWQRFTKDVRGVSEKEVLEKVYSILGSNHKVKRYHIRIERIEEIDPSASRDPFIRQVANS
ERIVKP
>Mature_86_residues
MEVKTYRVTGYMLISHDRYPTWQRFTKDVRGVSEKEVLEKVYSILGSNHKVKRYHIRIERIEEIDPSASRDPFIRQVANS
ERIVKP

Specific function: Unknown

COG id: COG2157

COG function: function code J; Ribosomal protein L20A (L18A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein LX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021138
- InterPro:   IPR002768
- ProDom:   PD010302 [H]

Pfam domain/function: PF01775 Ribosomal_L18ae [H]

EC number: NA

Molecular weight: Translated: 10278; Mature: 10278

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVKTYRVTGYMLISHDRYPTWQRFTKDVRGVSEKEVLEKVYSILGSNHKVKRYHIRIER
CCCEEEEEEEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEEEHH
IEEIDPSASRDPFIRQVANSERIVKP
HHCCCCCCCCCHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEVKTYRVTGYMLISHDRYPTWQRFTKDVRGVSEKEVLEKVYSILGSNHKVKRYHIRIER
CCCEEEEEEEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEEEHH
IEEIDPSASRDPFIRQVANSERIVKP
HHCCCCCCCCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA