| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218884373
Identifier: 218884373
GI number: 218884373
Start: 1007298
End: 1007624
Strand: Reverse
Name: 218884373
Synonym: DKAM_1062
Alternate gene names: NA
Gene position: 1007624-1007298 (Counterclockwise)
Preceding gene: 218884375
Following gene: 218884372
Centisome position: 73.81
GC content: 42.81
Gene sequence:
>327_bases GTGGGGAAAATGGTTTCAACGAAAATATCTGATAAGGAGCTCGACGAGGCATTGATGGAGAAGCAGGAGAAGAAGCCTAC AGACGAGAAACAGAGATGGGTTAACAGGATATTAAGAAGTGCTAGACAGTATCATAAGATATGCCCCTACTACGATAAAA GAACAAAGATGTGCTTCCTACTCATGGGTACTAAGTGTGAAAGGGATGGAAAATTCGATGTATGCCCAGTCTTCAAGTCG TTCCTCGAGAAGAAATACGATGAATACAAGTCGAAGAATATGCCGCTACCACTAGACTTCGCTGACGTGGTTGCATCACC GTTTTAA
Upstream 100 bases:
>100_bases CACCCTCCACGACACCTATTACAACCCATCCCTGTATCCTAGATTAGTGGATCTATATATAGTCAAACTTATTAGAGATT AACCATATATCTACAAGAGG
Downstream 100 bases:
>100_bases AGGTGTGTTGTAATGAGTGCCAGGAGGTATTACGTGGAGAACCCGGAGAAAATAATGATGGAGTATGATCCACAGGGCGA CATATTGTATATAGATTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MGKMVSTKISDKELDEALMEKQEKKPTDEKQRWVNRILRSARQYHKICPYYDKRTKMCFLLMGTKCERDGKFDVCPVFKS FLEKKYDEYKSKNMPLPLDFADVVASPF
Sequences:
>Translated_108_residues MGKMVSTKISDKELDEALMEKQEKKPTDEKQRWVNRILRSARQYHKICPYYDKRTKMCFLLMGTKCERDGKFDVCPVFKS FLEKKYDEYKSKNMPLPLDFADVVASPF >Mature_107_residues GKMVSTKISDKELDEALMEKQEKKPTDEKQRWVNRILRSARQYHKICPYYDKRTKMCFLLMGTKCERDGKFDVCPVFKSF LEKKYDEYKSKNMPLPLDFADVVASPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12842; Mature: 12711
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKMVSTKISDKELDEALMEKQEKKPTDEKQRWVNRILRSARQYHKICPYYDKRTKMCFL CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LMGTKCERDGKFDVCPVFKSFLEKKYDEYKSKNMPLPLDFADVVASPF HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCC >Mature Secondary Structure GKMVSTKISDKELDEALMEKQEKKPTDEKQRWVNRILRSARQYHKICPYYDKRTKMCFL CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LMGTKCERDGKFDVCPVFKSFLEKKYDEYKSKNMPLPLDFADVVASPF HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA