| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884367
Identifier: 218884367
GI number: 218884367
Start: 1003639
End: 1004505
Strand: Reverse
Name: 218884367
Synonym: DKAM_1056
Alternate gene names: NA
Gene position: 1004505-1003639 (Counterclockwise)
Preceding gene: 218884368
Following gene: 218884365
Centisome position: 73.58
GC content: 47.17
Gene sequence:
>867_bases ATGAGCCTAGAAGTCGCGAAAATACTCGTGTATGGTGCATTAAATGGCTTAAACACCTATGTAAAGCCTGGCGGCTTACA TAGATTGAGACCCGATAAATTATTCGATGAGATAGCATGTAACATTGTTTCAATACTAGACGGCATTGTAGGCGCGTATG AAGAGGGGGAGAGGGTTAGGAAAGGGGAAAAGGCGTTGACAAGCGTTGAATTAGGAAGGATACTGGCTAGAACTTATAGA GAGGCCTATAGGGTTTGTAGTATCGTCCACCCGGGATATTTCACACCTATGCTCATAGCTTCCATGGCACTTGGTTACAG CGGGGTCGAGAGCATTTTAAGCGATCCAGGTAAATTCAAGAGATCCCTTGACTCGATCCTAGCTGGCAACAAATGGGGCG ACATAAGGCATTTCATAGACTCATTGAAATCTATTGGTAGAAGCGATATGAATGAACACCTAGCCTCAACGGGGTTGACC CAGGTATCGTTGATTCAGGGTGGGGTATCATATACGGATGTCTTCCGGGCACTGGGATCCAGGTGGCCTGGCTTCATACT CTTGGATCCCCGTGAGAACCTCCTTCTAAACGGCTTGAGGAAACTCGTAGAATACCATAGGAAGCTGAAGAATGCCCATG CTGCAATACTCCTATTGTACCTCGACTTGATTGAGGAGAGGCTCGGTGAACAGTATAGGGAAGGCATATCTGAGGCGAGG AGGCTGGGGCTCATGGAAACCCATGAAGGGGCAAGGAAACTCTTCGAGCTTGATGTATCACTGAGGAAGAATGGTATTGT TCTAAATGGTTTCGTGGAGCAAGTGGCTAATCTAGCAGCGTTAGCGGCATTAGAGGGGGTTAGATAG
Upstream 100 bases:
>100_bases TAGGGCAGGAGTGCAGGGAGGAAGCATGTAGTACTATTTAACCAGGTGAATCACAGTGATTAATATCACCTGTAACAATT ATAGTTGAAAGGGGCTGTGT
Downstream 100 bases:
>100_bases TTCTATTACTATACTTCAACCTTAATTATTCTACCTCTGGCTGGTAGAGCGACATTGTATACTTTAACACTATCGATATC AATGCTCTCAACGAGTCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MSLEVAKILVYGALNGLNTYVKPGGLHRLRPDKLFDEIACNIVSILDGIVGAYEEGERVRKGEKALTSVELGRILARTYR EAYRVCSIVHPGYFTPMLIASMALGYSGVESILSDPGKFKRSLDSILAGNKWGDIRHFIDSLKSIGRSDMNEHLASTGLT QVSLIQGGVSYTDVFRALGSRWPGFILLDPRENLLLNGLRKLVEYHRKLKNAHAAILLLYLDLIEERLGEQYREGISEAR RLGLMETHEGARKLFELDVSLRKNGIVLNGFVEQVANLAALAALEGVR
Sequences:
>Translated_288_residues MSLEVAKILVYGALNGLNTYVKPGGLHRLRPDKLFDEIACNIVSILDGIVGAYEEGERVRKGEKALTSVELGRILARTYR EAYRVCSIVHPGYFTPMLIASMALGYSGVESILSDPGKFKRSLDSILAGNKWGDIRHFIDSLKSIGRSDMNEHLASTGLT QVSLIQGGVSYTDVFRALGSRWPGFILLDPRENLLLNGLRKLVEYHRKLKNAHAAILLLYLDLIEERLGEQYREGISEAR RLGLMETHEGARKLFELDVSLRKNGIVLNGFVEQVANLAALAALEGVR >Mature_287_residues SLEVAKILVYGALNGLNTYVKPGGLHRLRPDKLFDEIACNIVSILDGIVGAYEEGERVRKGEKALTSVELGRILARTYRE AYRVCSIVHPGYFTPMLIASMALGYSGVESILSDPGKFKRSLDSILAGNKWGDIRHFIDSLKSIGRSDMNEHLASTGLTQ VSLIQGGVSYTDVFRALGSRWPGFILLDPRENLLLNGLRKLVEYHRKLKNAHAAILLLYLDLIEERLGEQYREGISEARR LGLMETHEGARKLFELDVSLRKNGIVLNGFVEQVANLAALAALEGVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31936; Mature: 31804
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLEVAKILVYGALNGLNTYVKPGGLHRLRPDKLFDEIACNIVSILDGIVGAYEEGERVR CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGEKALTSVELGRILARTYREAYRVCSIVHPGYFTPMLIASMALGYSGVESILSDPGKFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHCCCHHHH RSLDSILAGNKWGDIRHFIDSLKSIGRSDMNEHLASTGLTQVSLIQGGVSYTDVFRALGS HHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHC RWPGFILLDPRENLLLNGLRKLVEYHRKLKNAHAAILLLYLDLIEERLGEQYREGISEAR CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLGLMETHEGARKLFELDVSLRKNGIVLNGFVEQVANLAALAALEGVR HCCCHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLEVAKILVYGALNGLNTYVKPGGLHRLRPDKLFDEIACNIVSILDGIVGAYEEGERVR CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGEKALTSVELGRILARTYREAYRVCSIVHPGYFTPMLIASMALGYSGVESILSDPGKFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHCCCHHHH RSLDSILAGNKWGDIRHFIDSLKSIGRSDMNEHLASTGLTQVSLIQGGVSYTDVFRALGS HHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHC RWPGFILLDPRENLLLNGLRKLVEYHRKLKNAHAAILLLYLDLIEERLGEQYREGISEAR CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLGLMETHEGARKLFELDVSLRKNGIVLNGFVEQVANLAALAALEGVR HCCCHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA