| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218884358
Identifier: 218884358
GI number: 218884358
Start: 993583
End: 994488
Strand: Direct
Name: 218884358
Synonym: DKAM_1047
Alternate gene names: NA
Gene position: 993583-994488 (Clockwise)
Preceding gene: 218884357
Following gene: 218884359
Centisome position: 72.78
GC content: 41.72
Gene sequence:
>906_bases TTGCAGGAGCCTGGAGACAGCTTTAATGTAGGGGCTTACCTGGGTAAACTAGGTAAACTAGAGGAGGAAGCTAGGAGCCT ATCAAACAATATAAGGAATTTTTTAAGTGAGACAGGCTCAAACAGGCTCATTATATCCTACAACGGTCATGGTTACCTAC CAGCATCATGCATGTTCTGGCACGTAGTAACCATGGATGAAGAAAAATCAATCCTTCTCCTTGATATTCCATCTACATCA TTATATGTGCTGGCTTACAGGGATCCCACACCTTTAATCATATACACGTCAAACCATTCAGGCCTACTTAACATACTTCA GATAGCTAGAATAATGAGCCATCCCTATATGGCGCTAGTGGCTAAGCCTGTTGATAAAAAAATCGTGGAGGTATTGAAGA GCTATAACATCATCTACACAAGCATCAATGATGAGCTTGACTCAACCCTTGTAATGGCTATCGCTGTGTTCCACGCATTA GCCAGTATATATAAGGATAGATTATCCAGGAGAGGTGTGAGGGTATTTGAACACAGCAGGGAAGGCTTCACCTTAATAGC TGGAGAACTCATAGAGGTTTACAAGGATGTTTTCTCTAAGGTATCCCTTCATAGAGAAGTAGTGGTATCATCGAGTAGGT TAATGGAGCCCTCCGCACGCTACCTAGTTGACGCATTAAAACGTAGACGAGTGAATGCTAGGTATGAATATCCTGAGTCA ATACCTAACTCAGCGGACGTGTTATTAATCGGTACTAGTGTGGAGGAGTATTATCTAAGAGAACTCAAGAGCAGGCTTGC AGTGGGGAAAACTAGAGTAAACGAACTAATATTAAACACTGACCCTATTGAAGCCAACATATACTTAGCCATAATAGCTA ATTATCTAGCCTGTTGCGGGTTCTAA
Upstream 100 bases:
>100_bases TCGTGAAAACAATGAGAGAGAACACTATTAAAATCCAGAGACTATTACCGGATATAATAGAGCTATTGAAAGACGAGCCA CGTGGAGAGGAGTGTAGCTG
Downstream 100 bases:
>100_bases ATCCTTTCTGAATTCTTGTAAATATTTTTGAACACGTTTTATTCTCTCGACGTCTCTACTCGTTTTCCTCGATGACTATT ACCTTTTACTTTTCTCCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MQEPGDSFNVGAYLGKLGKLEEEARSLSNNIRNFLSETGSNRLIISYNGHGYLPASCMFWHVVTMDEEKSILLLDIPSTS LYVLAYRDPTPLIIYTSNHSGLLNILQIARIMSHPYMALVAKPVDKKIVEVLKSYNIIYTSINDELDSTLVMAIAVFHAL ASIYKDRLSRRGVRVFEHSREGFTLIAGELIEVYKDVFSKVSLHREVVVSSSRLMEPSARYLVDALKRRRVNARYEYPES IPNSADVLLIGTSVEEYYLRELKSRLAVGKTRVNELILNTDPIEANIYLAIIANYLACCGF
Sequences:
>Translated_301_residues MQEPGDSFNVGAYLGKLGKLEEEARSLSNNIRNFLSETGSNRLIISYNGHGYLPASCMFWHVVTMDEEKSILLLDIPSTS LYVLAYRDPTPLIIYTSNHSGLLNILQIARIMSHPYMALVAKPVDKKIVEVLKSYNIIYTSINDELDSTLVMAIAVFHAL ASIYKDRLSRRGVRVFEHSREGFTLIAGELIEVYKDVFSKVSLHREVVVSSSRLMEPSARYLVDALKRRRVNARYEYPES IPNSADVLLIGTSVEEYYLRELKSRLAVGKTRVNELILNTDPIEANIYLAIIANYLACCGF >Mature_301_residues MQEPGDSFNVGAYLGKLGKLEEEARSLSNNIRNFLSETGSNRLIISYNGHGYLPASCMFWHVVTMDEEKSILLLDIPSTS LYVLAYRDPTPLIIYTSNHSGLLNILQIARIMSHPYMALVAKPVDKKIVEVLKSYNIIYTSINDELDSTLVMAIAVFHAL ASIYKDRLSRRGVRVFEHSREGFTLIAGELIEVYKDVFSKVSLHREVVVSSSRLMEPSARYLVDALKRRRVNARYEYPES IPNSADVLLIGTSVEEYYLRELKSRLAVGKTRVNELILNTDPIEANIYLAIIANYLACCGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33993; Mature: 33993
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEPGDSFNVGAYLGKLGKLEEEARSLSNNIRNFLSETGSNRLIISYNGHGYLPASCMFW CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEE HVVTMDEEKSILLLDIPSTSLYVLAYRDPTPLIIYTSNHSGLLNILQIARIMSHPYMALV EEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHH AKPVDKKIVEVLKSYNIIYTSINDELDSTLVMAIAVFHALASIYKDRLSRRGVRVFEHSR HCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC EGFTLIAGELIEVYKDVFSKVSLHREVVVSSSRLMEPSARYLVDALKRRRVNARYEYPES CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCC IPNSADVLLIGTSVEEYYLRELKSRLAVGKTRVNELILNTDPIEANIYLAIIANYLACCG CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCC F C >Mature Secondary Structure MQEPGDSFNVGAYLGKLGKLEEEARSLSNNIRNFLSETGSNRLIISYNGHGYLPASCMFW CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEE HVVTMDEEKSILLLDIPSTSLYVLAYRDPTPLIIYTSNHSGLLNILQIARIMSHPYMALV EEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHH AKPVDKKIVEVLKSYNIIYTSINDELDSTLVMAIAVFHALASIYKDRLSRRGVRVFEHSR HCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC EGFTLIAGELIEVYKDVFSKVSLHREVVVSSSRLMEPSARYLVDALKRRRVNARYEYPES CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCC IPNSADVLLIGTSVEEYYLRELKSRLAVGKTRVNELILNTDPIEANIYLAIIANYLACCG CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCC F C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA