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The map label for this gene is yidA [C]

Identifier: 218884325

GI number: 218884325

Start: 964009

End: 964764

Strand: Reverse

Name: yidA [C]

Synonym: DKAM_1014

Alternate gene names: 218884325

Gene position: 964764-964009 (Counterclockwise)

Preceding gene: 218884335

Following gene: 218884324

Centisome position: 70.67

GC content: 48.28

Gene sequence:

>756_bases
ATGCATAGTAAATGGGTGATCAGGGTGAGGATAGTATTCACCGATATCGATGGTACTTTAACCATTAATAGGAGGAGTTA
TATGCTGGCCTTGAAGGCTGTGGAGGCCTTGCGCTTACTCGTTGACAAGGGCGTGATCGTGTCCCTTGTCTCAAGCAATG
CATTACCAATCGTGGTGGGGCTCTCTAGATACATTGGGTTAAATGGCCCTGTCGTGGGTGAGTCAGGTGCATTAGTCTAC
AGTGATGAATGGGGTATTGTGGAGCTGACTAATATGAGTGCCCGGGATGTCTACCTCGACCTGCTTGAGAAGTATGGTGA
ATACGTTGAGGATTCCTGGCAGAACAGGTTCAGGCTCTACGAGTACGCTTTGAAGATGCGTGGGAAATACCTGGATAGGG
CTGGCGAGATAGTTAATGAGATGAAGAGGTATGTTGAGTCAAGGCATGAAGGCTACACCCTCGAGTACAGTGGGTACGCT
ATACACGTACACGCTAAGGGTGTCGGGAAAGGTGTTGCAGTCAAGTATATCCTGGATAAGCTTGGCATCAGTAGTAGTGA
AGCCCTGGGTATAGGTGACAGTGCGATGGATGTAGACTTCATCAAGTTCCTCGGTTACAGGGCTGCGGTCGGCGGCTCTG
ATGAGGAGTTACTCAAGTACTGTAATATTGTTGCAGAGTCTCCAAGCGGCTTTGGTTTAGCCGAGATTATTTCACGTGTT
TTAAACGGGATGGGTGATGAAGATTCCAGTGAGTAG

Upstream 100 bases:

>100_bases
CTTTAAAATTTATTCAAAACATATATATAGGTACTTATTTCCCACAATATTCTTACCACGCTTAAAACCATGCTAATAAA
TTTATCATGATTTAGTTGCG

Downstream 100 bases:

>100_bases
TCTTTTAAACAGTGTCAGACTAATCCTCTTCGACATGGATGGCACGCTTGTAGATAGCGAGGACTTCATTGTCTGGAGCT
TTACCGAGGCAGCACGTCTC

Product: phosphoglycolate phosphatase

Products: NA

Alternate protein names: PGP; PGPase [H]

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MHSKWVIRVRIVFTDIDGTLTINRRSYMLALKAVEALRLLVDKGVIVSLVSSNALPIVVGLSRYIGLNGPVVGESGALVY
SDEWGIVELTNMSARDVYLDLLEKYGEYVEDSWQNRFRLYEYALKMRGKYLDRAGEIVNEMKRYVESRHEGYTLEYSGYA
IHVHAKGVGKGVAVKYILDKLGISSSEALGIGDSAMDVDFIKFLGYRAAVGGSDEELLKYCNIVAESPSGFGLAEIISRV
LNGMGDEDSSE

Sequences:

>Translated_251_residues
MHSKWVIRVRIVFTDIDGTLTINRRSYMLALKAVEALRLLVDKGVIVSLVSSNALPIVVGLSRYIGLNGPVVGESGALVY
SDEWGIVELTNMSARDVYLDLLEKYGEYVEDSWQNRFRLYEYALKMRGKYLDRAGEIVNEMKRYVESRHEGYTLEYSGYA
IHVHAKGVGKGVAVKYILDKLGISSSEALGIGDSAMDVDFIKFLGYRAAVGGSDEELLKYCNIVAESPSGFGLAEIISRV
LNGMGDEDSSE
>Mature_251_residues
MHSKWVIRVRIVFTDIDGTLTINRRSYMLALKAVEALRLLVDKGVIVSLVSSNALPIVVGLSRYIGLNGPVVGESGALVY
SDEWGIVELTNMSARDVYLDLLEKYGEYVEDSWQNRFRLYEYALKMRGKYLDRAGEIVNEMKRYVESRHEGYTLEYSGYA
IHVHAKGVGKGVAVKYILDKLGISSSEALGIGDSAMDVDFIKFLGYRAAVGGSDEELLKYCNIVAESPSGFGLAEIISRV
LNGMGDEDSSE

Specific function: Catalyzes the dephosphorylation of 2-phosphoglycolate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal SPP-like hydrolase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR006382
- InterPro:   IPR006378 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: =3.1.3.18 [H]

Molecular weight: Translated: 27813; Mature: 27813

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSKWVIRVRIVFTDIDGTLTINRRSYMLALKAVEALRLLVDKGVIVSLVSSNALPIVVG
CCCCEEEEEEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEE
LSRYIGLNGPVVGESGALVYSDEWGIVELTNMSARDVYLDLLEKYGEYVEDSWQNRFRLY
HHHHHCCCCCEECCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYALKMRGKYLDRAGEIVNEMKRYVESRHEGYTLEYSGYAIHVHAKGVGKGVAVKYILDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCCCCHHHHHHHHH
LGISSSEALGIGDSAMDVDFIKFLGYRAAVGGSDEELLKYCNIVAESPSGFGLAEIISRV
HCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH
LNGMGDEDSSE
HHCCCCCCCCC
>Mature Secondary Structure
MHSKWVIRVRIVFTDIDGTLTINRRSYMLALKAVEALRLLVDKGVIVSLVSSNALPIVVG
CCCCEEEEEEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEE
LSRYIGLNGPVVGESGALVYSDEWGIVELTNMSARDVYLDLLEKYGEYVEDSWQNRFRLY
HHHHHCCCCCEECCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYALKMRGKYLDRAGEIVNEMKRYVESRHEGYTLEYSGYAIHVHAKGVGKGVAVKYILDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCCCCHHHHHHHHH
LGISSSEALGIGDSAMDVDFIKFLGYRAAVGGSDEELLKYCNIVAESPSGFGLAEIISRV
HCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH
LNGMGDEDSSE
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA