| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884249
Identifier: 218884249
GI number: 218884249
Start: 891747
End: 893330
Strand: Reverse
Name: 218884249
Synonym: DKAM_0938
Alternate gene names: NA
Gene position: 893330-891747 (Counterclockwise)
Preceding gene: 218884250
Following gene: 218884248
Centisome position: 65.43
GC content: 45.71
Gene sequence:
>1584_bases TTGCATCTTAAGGGTGAAATCATTACATGTATTGTTATAGTGATTATTATAGCTTCCATAATGGCTTTAACTAACCCCTA CCATGCCCAGGCATGGGGAGCACCCGGAGTTGAAGTGCTCTGGATACAATACAGTAATCCCAGCAGCGGCAGTGACGGTC CTTATGCAACATGTCTTGCTAATGATTCATTAATAGTGGTTGGCTACGATTCTATACCAGGTGGTAAACAATTCAGGATT GAGGCACGAGACCCGTGGACTGGACAGCTTAGAAATAACTGGACATATAACCCGGGCTACGGATACGAGGGATTATGGGA TTGTGATGTAATGGGGGGCTACATCTATTCTGTAGGCTACGGATACCCTAGCTACGTTTTGAGAGTTGATCCAGGTTTAA CGAGCTATGTGATCAATAGCGTGGGGGGATGGGCTACATCTATTACTAGTTATAATGGCTATCTCTACGTAGGGGGATTT GACTGGATTGCGGGCAACCAGGTTTTCCGTGTGGAGAAGCTTAGCGCAGACCTCAATACGGTTGACACATATATCTCGCA GGGTTCAAGAGATGTCTTCGCCACTTTACACAGTCTAGGAGTAAACCCTGTTACAGGACAGTTATGGGGTGTAGGTTACA TCTCTAATCCGGCTAAGGGGATTTTAGAGTGGTGGATCGAGATCGTGGATCCGGAATCAATGACACTGGTTAAAACCATT AGGCCAGGAATACCTGGTAGGGCGTATGCGGTGTTCTTTGATGGTGATGGTTATGCGTATATTATAGGGGACGGGGACTA TATAGTAAGGTTTAACAGGAATGGAGACCTCGTTAAGAAGATTAACCTAGGAGTTCTCTCGCTCAGCCTTTATAAGGGTG GCCTGGTAGGCGACCTAGTGGTTGTTGCCGGAGAGGAGAATAATGGTGGCTATTGGAGACATGTAATCTACTTGCTTGAT AAGGATTTAAACTCCATTGGTAACAAGACTCTGAGCGGGAGTGTAGACTCGTATATGTATACTGGTAAGCTCTGGATCAA TGGAAGCAGGGTCTACCTGGCGGGCTATGATAACCAGTTGGGAAACACCAGGTGGGTCATATACTCATTCGAAGTAGTTG GAGCCCCTATTACTACTGCGACAACTACTACAACCACTACAGTAACGAATGGGGTGGTCTCACAGCCGGTAACTATTACT AAGACGGAGACAACCACGGTGACGCAGGTGAGTACTGTTACTTTGACCAAGGACTCACCTACTATATTAACCACCACTAA GACGGAGACGATCACTATTGAAAAAACAGTATTAACGACCTTAACTGTGACACAAAGGATTACGGTGGCCGGGAACATTA CCAACATAACTTCTGTAGGGGATCATGCTCCGATGATCATAGTGGTAGCTATCGCATCCATAATAGCTGCGCTCACCATA TTTGTATTAAAGGGGAGTCATAGAGATGCAATGACGAGGGCGACAGGTATGCAAAGATCTTTTCGCCATGGTATCTATTT TCGATGCAAGTCTATTCCCCATATAGGTAGAGCCGGAGAGTGTAGAAGCCTGTGCAGGGTCTAA
Upstream 100 bases:
>100_bases GTTTACCTTCTACTACCTGTTTATTGAGAAATGATTATGTGACCAGTGGAGATGAATGCTTATAGAGTAGTAAAGATAGA TACTATGATGGGGGATAAGA
Downstream 100 bases:
>100_bases GCGATAGGTTGAGGCTGGCTTCGAGGAGGGATGTAGAGCTACGTGTAAGGGATCTCCTGCATTTCTATAGTAAAGAATAC GGCTCAGCTATCTTCGTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 527; Mature: 527
Protein sequence:
>527_residues MHLKGEIITCIVIVIIIASIMALTNPYHAQAWGAPGVEVLWIQYSNPSSGSDGPYATCLANDSLIVVGYDSIPGGKQFRI EARDPWTGQLRNNWTYNPGYGYEGLWDCDVMGGYIYSVGYGYPSYVLRVDPGLTSYVINSVGGWATSITSYNGYLYVGGF DWIAGNQVFRVEKLSADLNTVDTYISQGSRDVFATLHSLGVNPVTGQLWGVGYISNPAKGILEWWIEIVDPESMTLVKTI RPGIPGRAYAVFFDGDGYAYIIGDGDYIVRFNRNGDLVKKINLGVLSLSLYKGGLVGDLVVVAGEENNGGYWRHVIYLLD KDLNSIGNKTLSGSVDSYMYTGKLWINGSRVYLAGYDNQLGNTRWVIYSFEVVGAPITTATTTTTTTVTNGVVSQPVTIT KTETTTVTQVSTVTLTKDSPTILTTTKTETITIEKTVLTTLTVTQRITVAGNITNITSVGDHAPMIIVVAIASIIAALTI FVLKGSHRDAMTRATGMQRSFRHGIYFRCKSIPHIGRAGECRSLCRV
Sequences:
>Translated_527_residues MHLKGEIITCIVIVIIIASIMALTNPYHAQAWGAPGVEVLWIQYSNPSSGSDGPYATCLANDSLIVVGYDSIPGGKQFRI EARDPWTGQLRNNWTYNPGYGYEGLWDCDVMGGYIYSVGYGYPSYVLRVDPGLTSYVINSVGGWATSITSYNGYLYVGGF DWIAGNQVFRVEKLSADLNTVDTYISQGSRDVFATLHSLGVNPVTGQLWGVGYISNPAKGILEWWIEIVDPESMTLVKTI RPGIPGRAYAVFFDGDGYAYIIGDGDYIVRFNRNGDLVKKINLGVLSLSLYKGGLVGDLVVVAGEENNGGYWRHVIYLLD KDLNSIGNKTLSGSVDSYMYTGKLWINGSRVYLAGYDNQLGNTRWVIYSFEVVGAPITTATTTTTTTVTNGVVSQPVTIT KTETTTVTQVSTVTLTKDSPTILTTTKTETITIEKTVLTTLTVTQRITVAGNITNITSVGDHAPMIIVVAIASIIAALTI FVLKGSHRDAMTRATGMQRSFRHGIYFRCKSIPHIGRAGECRSLCRV >Mature_527_residues MHLKGEIITCIVIVIIIASIMALTNPYHAQAWGAPGVEVLWIQYSNPSSGSDGPYATCLANDSLIVVGYDSIPGGKQFRI EARDPWTGQLRNNWTYNPGYGYEGLWDCDVMGGYIYSVGYGYPSYVLRVDPGLTSYVINSVGGWATSITSYNGYLYVGGF DWIAGNQVFRVEKLSADLNTVDTYISQGSRDVFATLHSLGVNPVTGQLWGVGYISNPAKGILEWWIEIVDPESMTLVKTI RPGIPGRAYAVFFDGDGYAYIIGDGDYIVRFNRNGDLVKKINLGVLSLSLYKGGLVGDLVVVAGEENNGGYWRHVIYLLD KDLNSIGNKTLSGSVDSYMYTGKLWINGSRVYLAGYDNQLGNTRWVIYSFEVVGAPITTATTTTTTTVTNGVVSQPVTIT KTETTTVTQVSTVTLTKDSPTILTTTKTETITIEKTVLTTLTVTQRITVAGNITNITSVGDHAPMIIVVAIASIIAALTI FVLKGSHRDAMTRATGMQRSFRHGIYFRCKSIPHIGRAGECRSLCRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57400; Mature: 57400
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLKGEIITCIVIVIIIASIMALTNPYHAQAWGAPGVEVLWIQYSNPSSGSDGPYATCLA CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEE NDSLIVVGYDSIPGGKQFRIEARDPWTGQLRNNWTYNPGYGYEGLWDCDVMGGYIYSVGY CCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCEEEEEECCCEEEEECC GYPSYVLRVDPGLTSYVINSVGGWATSITSYNGYLYVGGFDWIAGNQVFRVEKLSADLNT CCCEEEEEECCCHHHHHHHCCCCCEEEEEECCCEEEECCEEEECCCEEEEEEECCCCHHH VDTYISQGSRDVFATLHSLGVNPVTGQLWGVGYISNPAKGILEWWIEIVDPESMTLVKTI HHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEC RPGIPGRAYAVFFDGDGYAYIIGDGDYIVRFNRNGDLVKKINLGVLSLSLYKGGLVGDLV CCCCCCCEEEEEECCCCEEEEEECCCEEEEECCCCCEEEEEECEEEEEEEECCCCEEEEE VVAGEENNGGYWRHVIYLLDKDLNSIGNKTLSGSVDSYMYTGKLWINGSRVYLAGYDNQL EEEECCCCCCEEEEEEEEEEHHHHHHCCCEECCCCCCEEEEEEEEEECCEEEEEECCCCC GNTRWVIYSFEVVGAPITTATTTTTTTVTNGVVSQPVTITKTETTTVTQVSTVTLTKDSP CCEEEEEEEEEEECCCEEEEEEEEEEEEECCCCCCCEEEEECCCEEEEEEEEEEEECCCC TILTTTKTETITIEKTVLTTLTVTQRITVAGNITNITSVGDHAPMIIVVAIASIIAALTI EEEEECCCEEEEEEEEEEEEEEEEEEEEEEECCCEECCCCCCCCCHHHHHHHHHHHHHEE FVLKGSHRDAMTRATGMQRSFRHGIYFRCKSIPHIGRAGECRSLCRV EEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHCC >Mature Secondary Structure MHLKGEIITCIVIVIIIASIMALTNPYHAQAWGAPGVEVLWIQYSNPSSGSDGPYATCLA CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEE NDSLIVVGYDSIPGGKQFRIEARDPWTGQLRNNWTYNPGYGYEGLWDCDVMGGYIYSVGY CCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCEEEEEECCCEEEEECC GYPSYVLRVDPGLTSYVINSVGGWATSITSYNGYLYVGGFDWIAGNQVFRVEKLSADLNT CCCEEEEEECCCHHHHHHHCCCCCEEEEEECCCEEEECCEEEECCCEEEEEEECCCCHHH VDTYISQGSRDVFATLHSLGVNPVTGQLWGVGYISNPAKGILEWWIEIVDPESMTLVKTI HHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEC RPGIPGRAYAVFFDGDGYAYIIGDGDYIVRFNRNGDLVKKINLGVLSLSLYKGGLVGDLV CCCCCCCEEEEEECCCCEEEEEECCCEEEEECCCCCEEEEEECEEEEEEEECCCCEEEEE VVAGEENNGGYWRHVIYLLDKDLNSIGNKTLSGSVDSYMYTGKLWINGSRVYLAGYDNQL EEEECCCCCCEEEEEEEEEEHHHHHHCCCEECCCCCCEEEEEEEEEECCEEEEEECCCCC GNTRWVIYSFEVVGAPITTATTTTTTTVTNGVVSQPVTITKTETTTVTQVSTVTLTKDSP CCEEEEEEEEEEECCCEEEEEEEEEEEEECCCCCCCEEEEECCCEEEEEEEEEEEECCCC TILTTTKTETITIEKTVLTTLTVTQRITVAGNITNITSVGDHAPMIIVVAIASIIAALTI EEEEECCCEEEEEEEEEEEEEEEEEEEEEEECCCEECCCCCCCCCHHHHHHHHHHHHHEE FVLKGSHRDAMTRATGMQRSFRHGIYFRCKSIPHIGRAGECRSLCRV EEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA