| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884231
Identifier: 218884231
GI number: 218884231
Start: 874730
End: 875263
Strand: Direct
Name: 218884231
Synonym: DKAM_0920
Alternate gene names: NA
Gene position: 874730-875263 (Clockwise)
Preceding gene: 218884229
Following gene: 218884232
Centisome position: 64.07
GC content: 47.57
Gene sequence:
>534_bases TTGTTCTACAGGATTATACTAGTTGCGGTAGGCTTAGCACTAACGGGTTTTATAGCTTTTGCTTCAATAACCAATATATT CGTTGTAAACATCAGAGGCGCTGTAAACGTGCCCCGGCCGATATTTGAGAGGAGCATTGAGATCGAGATCAATGCTTCCA GCGGTTCTAGAACAATAGACTTAGGCATCGTGACAATACCTGGAGACGGCTATTTCAAGGTTGAAGCCTACAGTAGTATC CTAGACAAGGGTTTCAGAATCATATTGAACGGTGTCCTCAGGCTCGAGCCTGTATACAAGCCGTTGACGGGTAATTCGAG CGTAAGCATTAGCATGCCATGCCTACTCGTGGTAAACACTACATGCTACAGAGTGATGGTTATTATACCAGGGTATGACA CGCCTATAAGGATATCGGGGGGAGAGTACAGGGCGAGCCTGGATATCACTTGGGGCGAAGCAGAGGGGACAGGGTCTTTC CAGCTGGTTATCAAAGGCCTATACGGTGAGAGCCCGTTCCAGCCGTTGACATAG
Upstream 100 bases:
>100_bases GGTGGCCCAGCATATTACATTAATAGTTTTGTATAAGAGGGGGGTATACTAGTGAGTTATATAAGGCTGTTTTCCTAAGT TTTATCATGGGGGCTTAAAC
Downstream 100 bases:
>100_bases GATACGCTTAGAGCTTTTCACGACTCTAGGAGAGGGTTTACGAGGGCAGATGCTTACCCCATGTTGGGCACTAGGCTTAG ACACCGTTTCACCTAGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MFYRIILVAVGLALTGFIAFASITNIFVVNIRGAVNVPRPIFERSIEIEINASSGSRTIDLGIVTIPGDGYFKVEAYSSI LDKGFRIILNGVLRLEPVYKPLTGNSSVSISMPCLLVVNTTCYRVMVIIPGYDTPIRISGGEYRASLDITWGEAEGTGSF QLVIKGLYGESPFQPLT
Sequences:
>Translated_177_residues MFYRIILVAVGLALTGFIAFASITNIFVVNIRGAVNVPRPIFERSIEIEINASSGSRTIDLGIVTIPGDGYFKVEAYSSI LDKGFRIILNGVLRLEPVYKPLTGNSSVSISMPCLLVVNTTCYRVMVIIPGYDTPIRISGGEYRASLDITWGEAEGTGSF QLVIKGLYGESPFQPLT >Mature_177_residues MFYRIILVAVGLALTGFIAFASITNIFVVNIRGAVNVPRPIFERSIEIEINASSGSRTIDLGIVTIPGDGYFKVEAYSSI LDKGFRIILNGVLRLEPVYKPLTGNSSVSISMPCLLVVNTTCYRVMVIIPGYDTPIRISGGEYRASLDITWGEAEGTGSF QLVIKGLYGESPFQPLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19244; Mature: 19244
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFYRIILVAVGLALTGFIAFASITNIFVVNIRGAVNVPRPIFERSIEIEINASSGSRTID CHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCHHHCCEEEEEEECCCCCEEEE LGIVTIPGDGYFKVEAYSSILDKGFRIILNGVLRLEPVYKPLTGNSSVSISMPCLLVVNT EEEEEECCCCEEEEHHHHHHHHCCCEEEEECCEEECCCCCCCCCCCEEEEECCEEEEEEC TCYRVMVIIPGYDTPIRISGGEYRASLDITWGEAEGTGSFQLVIKGLYGESPFQPLT CEEEEEEEECCCCCCEEEECCCEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCC >Mature Secondary Structure MFYRIILVAVGLALTGFIAFASITNIFVVNIRGAVNVPRPIFERSIEIEINASSGSRTID CHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCHHHCCEEEEEEECCCCCEEEE LGIVTIPGDGYFKVEAYSSILDKGFRIILNGVLRLEPVYKPLTGNSSVSISMPCLLVVNT EEEEEECCCCEEEEHHHHHHHHCCCEEEEECCEEECCCCCCCCCCCEEEEECCEEEEEEC TCYRVMVIIPGYDTPIRISGGEYRASLDITWGEAEGTGSFQLVIKGLYGESPFQPLT CEEEEEEEECCCCCCEEEECCCEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA