| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884217
Identifier: 218884217
GI number: 218884217
Start: 861598
End: 862134
Strand: Direct
Name: 218884217
Synonym: DKAM_0906
Alternate gene names: NA
Gene position: 861598-862134 (Clockwise)
Preceding gene: 218884216
Following gene: 218884225
Centisome position: 63.11
GC content: 43.95
Gene sequence:
>537_bases ATGGTGACCGAGGACTTGGAAAACAAGGAGCTAGAACTAACAAAGAAGCTTGCTGCAAACCCAAGGATAAGTATTAAGAG GCTTGCCGACGACTTAGATATGAATTACACTGCTTTAAGGGATAGGATTAGGAAGCTATCCTATAAGGGCTTGATAAGCT TCATCCTATCTGTTTCACCGCTTATCACCGGAAACACTGCAGCCTTGGTTAGGTTGAAGGGACATAAAGTGGAGAAATTG TTGTCGAGTGCCTCGAAATGTAATAGGGTTATAACAGGCCTAAAGGTGAGCGATGATGAAGCCATCCTAGTGATCTATGG AAAAGACAAGGGTGATATTGTATCAGTTATAGATGTATTGAGAGATGAAGCCGGCGGGGATCTTGAAATACACGTGGAAT ACGGGAGGCTCCACCCAGACTTTAAAGTCCAGATAAGGAACCCCAATCCTGAGTGCAATCATCCACCATGTAATAACTGT ATACCCGTGCTCAGGAATAGGGTTAAGAATAGTTCTGGGCTTCATGGAACGCCGTAA
Upstream 100 bases:
>100_bases ACGCCTAGTTATCGAGGCAAGCCCTCCACGTCTTTTAGGCGGACTCCTGCCGGTATAGTGGATAAGGAATAAAATAGGGT TTACATAAATCTTCAACCCG
Downstream 100 bases:
>100_bases GCCTCCTTGGTGAATACGAATATATTTTCATAGGTCGGCTTTCTCCTTAGATCTCTTATTCTCCTCCTGTACCACGGCAT TTGTTTAAGGGTGTGATAAA
Product: putative AsnC family transcriptional regulator
Products: NA
Alternate protein names: AsnC Family Transcriptional Regulator
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MVTEDLENKELELTKKLAANPRISIKRLADDLDMNYTALRDRIRKLSYKGLISFILSVSPLITGNTAALVRLKGHKVEKL LSSASKCNRVITGLKVSDDEAILVIYGKDKGDIVSVIDVLRDEAGGDLEIHVEYGRLHPDFKVQIRNPNPECNHPPCNNC IPVLRNRVKNSSGLHGTP
Sequences:
>Translated_178_residues MVTEDLENKELELTKKLAANPRISIKRLADDLDMNYTALRDRIRKLSYKGLISFILSVSPLITGNTAALVRLKGHKVEKL LSSASKCNRVITGLKVSDDEAILVIYGKDKGDIVSVIDVLRDEAGGDLEIHVEYGRLHPDFKVQIRNPNPECNHPPCNNC IPVLRNRVKNSSGLHGTP >Mature_178_residues MVTEDLENKELELTKKLAANPRISIKRLADDLDMNYTALRDRIRKLSYKGLISFILSVSPLITGNTAALVRLKGHKVEKL LSSASKCNRVITGLKVSDDEAILVIYGKDKGDIVSVIDVLRDEAGGDLEIHVEYGRLHPDFKVQIRNPNPECNHPPCNNC IPVLRNRVKNSSGLHGTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19763; Mature: 19763
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTEDLENKELELTKKLAANPRISIKRLADDLDMNYTALRDRIRKLSYKGLISFILSVSP CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC LITGNTAALVRLKGHKVEKLLSSASKCNRVITGLKVSDDEAILVIYGKDKGDIVSVIDVL CEECCCEEEEEECCHHHHHHHHHHHHHHHHHHCEEECCCCEEEEEEECCCCCHHHHHHHH RDEAGGDLEIHVEYGRLHPDFKVQIRNPNPECNHPPCNNCIPVLRNRVKNSSGLHGTP HHCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MVTEDLENKELELTKKLAANPRISIKRLADDLDMNYTALRDRIRKLSYKGLISFILSVSP CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC LITGNTAALVRLKGHKVEKLLSSASKCNRVITGLKVSDDEAILVIYGKDKGDIVSVIDVL CEECCCEEEEEECCHHHHHHHHHHHHHHHHHHCEEECCCCEEEEEEECCCCCHHHHHHHH RDEAGGDLEIHVEYGRLHPDFKVQIRNPNPECNHPPCNNCIPVLRNRVKNSSGLHGTP HHCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA