| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884212
Identifier: 218884212
GI number: 218884212
Start: 858173
End: 859162
Strand: Reverse
Name: 218884212
Synonym: DKAM_0901
Alternate gene names: NA
Gene position: 859162-858173 (Counterclockwise)
Preceding gene: 218884218
Following gene: 218884211
Centisome position: 62.93
GC content: 43.84
Gene sequence:
>990_bases GTGTTTAACATGTTTACCTGGAAAGGTTTAAACCCATACCTGTTACTACTGCTAGTACTCTGCATACTCACTGGTTTAAC CCATGTAGTGCTGGGTACGCAGCAGGGGATCGAGAGTGTCGAGTACGTTGTTTTCTACAACCCGATCGAGGGGACAGGGA TTCTCAGTGTCTCGATCACTATGTCGCTCACGCCTGGTGAGATAGGTAATGTGGATCTACCCATCAAGATATTCAGCGAC GCCTCCCTCTACTTCTTTAACTACACTGTGAATCCTCCAACAGGTTCTCTGGTGGTAAATTACGATGATAACAGTGGGGT TGCATCACTCCTCGTATCCAATGCTTCGACGGTGACGCTGTATTTCACGGTCAGTAACTTAACTGAGGAAGCCTCGATAG GTTCTTATACAGCGACGCTGGATTTACTGGATTATGCCAGTGGAGCAGTGAACGTATCCGTGGAGATATACTTGACCGGA ATATATGACGTCATAATAGACTCCTACCCTAGGGTATCTGGTTACAGTATTCAGACGTTAACTAATACAACAGTAATCCG AACACATGATCCAGCGATATATTTCATAGTGTTGAAGATACCCGTGAACACTGCATCCCCTTCCTCCACTCAATTCAATC TATTAAACTTACTGTTCCCCTTACTACTAATACTAATAACAGTAGTTGCGATAGTGATCATTGTTCTAAGGTGGAGGAGG ACAAGTATAGGTAGAATCGAGAAGGTCGATGTCTTAAATGATCCCGTTTCGAGAAGCATAATAAGGGCCCTAGGTGAGGC TGGAGACGCTGGATTAACTCAGGCCGAGATAACGAATAAGACCGGGATACCTAAGTCAAGTGTGAGCAGAAGGATAAGGA GACTCGAGGAAGAGGGATTCATAACAGTTGCTAGGACTGGTAAATATAATTACTTAAGACTAACAGATAAGGGTAAGGAA GCATATAGGAGAATAGTGGAGAAAAAATGA
Upstream 100 bases:
>100_bases CTCGCTGTACATCCACATGGTTTACAACCTTTATACCACTATTTCACTAGAGATAATGTTTAATAATTATTAACCTAACT TTATTATAGGAAAAACAACG
Downstream 100 bases:
>100_bases GGGAGCCCAGACCCCTTTACGGCATGGGTTTCTTCCATGTATTGGAATCAGGCTGGATCAATGAAGTGGTGATTTTCGAT TACCACGACCCGGATCACTA
Product: membrane protein
Products: NA
Alternate protein names: Regulatory Protein MarR; Transcriptional Regulator MarR Family
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MFNMFTWKGLNPYLLLLLVLCILTGLTHVVLGTQQGIESVEYVVFYNPIEGTGILSVSITMSLTPGEIGNVDLPIKIFSD ASLYFFNYTVNPPTGSLVVNYDDNSGVASLLVSNASTVTLYFTVSNLTEEASIGSYTATLDLLDYASGAVNVSVEIYLTG IYDVIIDSYPRVSGYSIQTLTNTTVIRTHDPAIYFIVLKIPVNTASPSSTQFNLLNLLFPLLLILITVVAIVIIVLRWRR TSIGRIEKVDVLNDPVSRSIIRALGEAGDAGLTQAEITNKTGIPKSSVSRRIRRLEEEGFITVARTGKYNYLRLTDKGKE AYRRIVEKK
Sequences:
>Translated_329_residues MFNMFTWKGLNPYLLLLLVLCILTGLTHVVLGTQQGIESVEYVVFYNPIEGTGILSVSITMSLTPGEIGNVDLPIKIFSD ASLYFFNYTVNPPTGSLVVNYDDNSGVASLLVSNASTVTLYFTVSNLTEEASIGSYTATLDLLDYASGAVNVSVEIYLTG IYDVIIDSYPRVSGYSIQTLTNTTVIRTHDPAIYFIVLKIPVNTASPSSTQFNLLNLLFPLLLILITVVAIVIIVLRWRR TSIGRIEKVDVLNDPVSRSIIRALGEAGDAGLTQAEITNKTGIPKSSVSRRIRRLEEEGFITVARTGKYNYLRLTDKGKE AYRRIVEKK >Mature_329_residues MFNMFTWKGLNPYLLLLLVLCILTGLTHVVLGTQQGIESVEYVVFYNPIEGTGILSVSITMSLTPGEIGNVDLPIKIFSD ASLYFFNYTVNPPTGSLVVNYDDNSGVASLLVSNASTVTLYFTVSNLTEEASIGSYTATLDLLDYASGAVNVSVEIYLTG IYDVIIDSYPRVSGYSIQTLTNTTVIRTHDPAIYFIVLKIPVNTASPSSTQFNLLNLLFPLLLILITVVAIVIIVLRWRR TSIGRIEKVDVLNDPVSRSIIRALGEAGDAGLTQAEITNKTGIPKSSVSRRIRRLEEEGFITVARTGKYNYLRLTDKGKE AYRRIVEKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36237; Mature: 36237
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNMFTWKGLNPYLLLLLVLCILTGLTHVVLGTQQGIESVEYVVFYNPIEGTGILSVSIT CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCEEEEEEECCCCCCEEEEEEEE MSLTPGEIGNVDLPIKIFSDASLYFFNYTVNPPTGSLVVNYDDNSGVASLLVSNASTVTL EEECCCCCCCEEEEEEEECCCEEEEEEEEECCCCCEEEEEECCCCCHHHHEECCCCEEEE YFTVSNLTEEASIGSYTATLDLLDYASGAVNVSVEIYLTGIYDVIIDSYPRVSGYSIQTL EEEECCCCCCCCCCCEEEEEEHHHCCCCEEEEEEEEEEEEEHHHHHCCCCCCCCEEEEEE TNTTVIRTHDPAIYFIVLKIPVNTASPSSTQFNLLNLLFPLLLILITVVAIVIIVLRWRR CCEEEEEECCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TSIGRIEKVDVLNDPVSRSIIRALGEAGDAGLTQAEITNKTGIPKSSVSRRIRRLEEEGF CCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEHEECCCCCCCHHHHHHHHHHHHHCCC ITVARTGKYNYLRLTDKGKEAYRRIVEKK EEEEECCCEEEEEEECCCHHHHHHHHCCC >Mature Secondary Structure MFNMFTWKGLNPYLLLLLVLCILTGLTHVVLGTQQGIESVEYVVFYNPIEGTGILSVSIT CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCEEEEEEECCCCCCEEEEEEEE MSLTPGEIGNVDLPIKIFSDASLYFFNYTVNPPTGSLVVNYDDNSGVASLLVSNASTVTL EEECCCCCCCEEEEEEEECCCEEEEEEEEECCCCCEEEEEECCCCCHHHHEECCCCEEEE YFTVSNLTEEASIGSYTATLDLLDYASGAVNVSVEIYLTGIYDVIIDSYPRVSGYSIQTL EEEECCCCCCCCCCCEEEEEEHHHCCCCEEEEEEEEEEEEEHHHHHCCCCCCCCEEEEEE TNTTVIRTHDPAIYFIVLKIPVNTASPSSTQFNLLNLLFPLLLILITVVAIVIIVLRWRR CCEEEEEECCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TSIGRIEKVDVLNDPVSRSIIRALGEAGDAGLTQAEITNKTGIPKSSVSRRIRRLEEEGF CCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEHEECCCCCCCHHHHHHHHHHHHHCCC ITVARTGKYNYLRLTDKGKEAYRRIVEKK EEEEECCCEEEEEEECCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA