| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884211
Identifier: 218884211
GI number: 218884211
Start: 857649
End: 858176
Strand: Reverse
Name: 218884211
Synonym: DKAM_0900
Alternate gene names: NA
Gene position: 858176-857649 (Counterclockwise)
Preceding gene: 218884212
Following gene: 218884210
Centisome position: 62.86
GC content: 43.75
Gene sequence:
>528_bases ATGAGGGAGCCCAGACCCCTTTACGGCATGGGTTTCTTCCATGTATTGGAATCAGGCTGGATCAATGAAGTGGTGATTTT CGATTACCACGACCCGGATCACTACTACCATGGTTTAACAAGCGATGAGCTAGCGGAGGAAAAAGAAGCACTGGCTAAAA ACATGCAGTTCTACCTTGACATGGAGGAGGTTAAACTCAACGGTAAGCCGTGTTTTCCAAGAGTTATAGGTGTCGACATA GGTTTTAGAGGTAGCATTGAATACCCATATATAGTCTTCATAATTGTGTTTAAAGGAGAGTTGAAACCAGGTGTAAACGT GTTCGAGGATATCTACGAGGAGGAAACGGTTGAATATGGCTACAGAGTATACTGGATGCTCCCTGAAACGGGTAGATTCA TCGAGGCTGATCTGGGGGTTCCATATGTTATAACCAGTGGGGGCAGGCTACTGGTATTCAACGTGGAACCCGGTGTAAAA GTAAGAGGCTATGAGAAAATAGTTTTCGAGGTTAAAAGAATTAAATAG
Upstream 100 bases:
>100_bases AGGAAGAGGGATTCATAACAGTTGCTAGGACTGGTAAATATAATTACTTAAGACTAACAGATAAGGGTAAGGAAGCATAT AGGAGAATAGTGGAGAAAAA
Downstream 100 bases:
>100_bases CCTGTTGCAGGTTCTAAATCCTTTCTGAATTCTTTGTAGATATTTTGGATGTTTGGGACGTGTTTTATCTTCTTGGTGTC TTTACTTGTTTTCCTTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MREPRPLYGMGFFHVLESGWINEVVIFDYHDPDHYYHGLTSDELAEEKEALAKNMQFYLDMEEVKLNGKPCFPRVIGVDI GFRGSIEYPYIVFIIVFKGELKPGVNVFEDIYEEETVEYGYRVYWMLPETGRFIEADLGVPYVITSGGRLLVFNVEPGVK VRGYEKIVFEVKRIK
Sequences:
>Translated_175_residues MREPRPLYGMGFFHVLESGWINEVVIFDYHDPDHYYHGLTSDELAEEKEALAKNMQFYLDMEEVKLNGKPCFPRVIGVDI GFRGSIEYPYIVFIIVFKGELKPGVNVFEDIYEEETVEYGYRVYWMLPETGRFIEADLGVPYVITSGGRLLVFNVEPGVK VRGYEKIVFEVKRIK >Mature_175_residues MREPRPLYGMGFFHVLESGWINEVVIFDYHDPDHYYHGLTSDELAEEKEALAKNMQFYLDMEEVKLNGKPCFPRVIGVDI GFRGSIEYPYIVFIIVFKGELKPGVNVFEDIYEEETVEYGYRVYWMLPETGRFIEADLGVPYVITSGGRLLVFNVEPGVK VRGYEKIVFEVKRIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20394; Mature: 20394
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREPRPLYGMGFFHVLESGWINEVVIFDYHDPDHYYHGLTSDELAEEKEALAKNMQFYLD CCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCHHCCCCCHHHHHHHHHHHHCCCEEEEE MEEVKLNGKPCFPRVIGVDIGFRGSIEYPYIVFIIVFKGELKPGVNVFEDIYEEETVEYG HHHEEECCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCC YRVYWMLPETGRFIEADLGVPYVITSGGRLLVFNVEPGVKVRGYEKIVFEVKRIK EEEEEEECCCCCEEEECCCCCEEEECCCEEEEEECCCCCEECCHHEEEEEEEECC >Mature Secondary Structure MREPRPLYGMGFFHVLESGWINEVVIFDYHDPDHYYHGLTSDELAEEKEALAKNMQFYLD CCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCHHCCCCCHHHHHHHHHHHHCCCEEEEE MEEVKLNGKPCFPRVIGVDIGFRGSIEYPYIVFIIVFKGELKPGVNVFEDIYEEETVEYG HHHEEECCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCC YRVYWMLPETGRFIEADLGVPYVITSGGRLLVFNVEPGVKVRGYEKIVFEVKRIK EEEEEEECCCCCEEEECCCCCEEEECCCEEEEEECCCCCEECCHHEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA