| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883772
Identifier: 218883772
GI number: 218883772
Start: 429925
End: 430794
Strand: Reverse
Name: 218883772
Synonym: DKAM_0461
Alternate gene names: NA
Gene position: 430794-429925 (Counterclockwise)
Preceding gene: 218883774
Following gene: 218883771
Centisome position: 31.55
GC content: 48.74
Gene sequence:
>870_bases ATGAGGCTACTGATAACCGGGCTACTCCCACATGACTCCGGCAAGACGGTTATAGCACTCAACCTCTCTAAGGCACTCTC TAAGAGTCTGAGGGTATTCTACTTCAAGCCGATTGCAGGGCATAGTGGGTGGTATCAAGCCGAGACCGTGAAGCACTCTC TTGAAGCAGGGATACTAGTAGGCCACGACGCTTACACTGCTGCCAGGGAGCTAGGGTTACTAGACAGGGTGCGCTTGGTG AATCCTGTGGACCTACTCACTATGCCGCCTGATCCATTAAAGTATATTAAATCAATAAGGCTCTACCTGGGCATCCTCGC CGACGTGGCTTCTCAAACCGTTTTAATGAGGATCAGCCGTCCACTAGAAGGCGTCGATGAGTACTTCATTGTAAGAGAGA ATGCTAGGAGGTTGAATAAGGTTGCATTAACCGTTCTTGAAGGGTTGATCGAGAGGTTCTCAGCCAGGGGTAACGTGGTG TTTCATGATGCCGAGCCAGGCTTGATCATGAAGCTATTCAGTAATAGGGAGGCACTCAACTGGTTGAACAATATATATGG GCTCCTCAGCGAGTACGATGTAGTTGTCACCGAGAGCTATAATAATGCGGCTACACCAATAGAGGCCTCACTCGATAGCG ACCTAGTTCTTGTAACAGCCCCTACAAGGCTATTGATATACAGGGGCACCCGTTACAGGCAGGGGGTTGAGGCCTTCTCG ATGGGGAGGCCACCATGGCTGGTGGACGTAGGCGGTATTGTGGAGGTTCTAGGGGAACCATTGAAAACCATGGATATACC TTACTCTAATACCAGTGAATTCAATGACTTTATTGATCTCCTGGTAGAGTTTATTACCTCCTATCAATAA
Upstream 100 bases:
>100_bases TTAGCAGTATAATTGAGAATAAAGCCCTGATACCCATTATCATACACCATGATTCAACAATGTATAAGGCGTCTGGGTTA TAAACATTCTTGGTGAAACA
Downstream 100 bases:
>100_bases CTAGTCTTCTCTAAAAGGTGCTGGGTAATGTCTGAGCTTGAAAGACATGGGTTTACCCGGAGGGCAACTGGATCCGAGCT ATTATTTCAAATAGCCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: P-Loop ATPase/GTPase
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MRLLITGLLPHDSGKTVIALNLSKALSKSLRVFYFKPIAGHSGWYQAETVKHSLEAGILVGHDAYTAARELGLLDRVRLV NPVDLLTMPPDPLKYIKSIRLYLGILADVASQTVLMRISRPLEGVDEYFIVRENARRLNKVALTVLEGLIERFSARGNVV FHDAEPGLIMKLFSNREALNWLNNIYGLLSEYDVVVTESYNNAATPIEASLDSDLVLVTAPTRLLIYRGTRYRQGVEAFS MGRPPWLVDVGGIVEVLGEPLKTMDIPYSNTSEFNDFIDLLVEFITSYQ
Sequences:
>Translated_289_residues MRLLITGLLPHDSGKTVIALNLSKALSKSLRVFYFKPIAGHSGWYQAETVKHSLEAGILVGHDAYTAARELGLLDRVRLV NPVDLLTMPPDPLKYIKSIRLYLGILADVASQTVLMRISRPLEGVDEYFIVRENARRLNKVALTVLEGLIERFSARGNVV FHDAEPGLIMKLFSNREALNWLNNIYGLLSEYDVVVTESYNNAATPIEASLDSDLVLVTAPTRLLIYRGTRYRQGVEAFS MGRPPWLVDVGGIVEVLGEPLKTMDIPYSNTSEFNDFIDLLVEFITSYQ >Mature_289_residues MRLLITGLLPHDSGKTVIALNLSKALSKSLRVFYFKPIAGHSGWYQAETVKHSLEAGILVGHDAYTAARELGLLDRVRLV NPVDLLTMPPDPLKYIKSIRLYLGILADVASQTVLMRISRPLEGVDEYFIVRENARRLNKVALTVLEGLIERFSARGNVV FHDAEPGLIMKLFSNREALNWLNNIYGLLSEYDVVVTESYNNAATPIEASLDSDLVLVTAPTRLLIYRGTRYRQGVEAFS MGRPPWLVDVGGIVEVLGEPLKTMDIPYSNTSEFNDFIDLLVEFITSYQ
Specific function: Unknown
COG id: COG4028
COG function: function code R; Predicted P-loop ATPase/GTPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32342; Mature: 32342
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLITGLLPHDSGKTVIALNLSKALSKSLRVFYFKPIAGHSGWYQAETVKHSLEAGILV CEEEEEEECCCCCCCEEEEEEHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCEEE GHDAYTAARELGLLDRVRLVNPVDLLTMPPDPLKYIKSIRLYLGILADVASQTVLMRISR CCHHHHHHHHHCHHHHHHHCCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PLEGVDEYFIVRENARRLNKVALTVLEGLIERFSARGNVVFHDAEPGLIMKLFSNREALN CCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEHHHHCCCHHHH WLNNIYGLLSEYDVVVTESYNNAATPIEASLDSDLVLVTAPTRLLIYRGTRYRQGVEAFS HHHHHHHHHHCCCEEEEECCCCCCCCEECCCCCCEEEEECCCEEEEECCCCHHHCHHHHH MGRPPWLVDVGGIVEVLGEPLKTMDIPYSNTSEFNDFIDLLVEFITSYQ CCCCCEEEEHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRLLITGLLPHDSGKTVIALNLSKALSKSLRVFYFKPIAGHSGWYQAETVKHSLEAGILV CEEEEEEECCCCCCCEEEEEEHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCEEE GHDAYTAARELGLLDRVRLVNPVDLLTMPPDPLKYIKSIRLYLGILADVASQTVLMRISR CCHHHHHHHHHCHHHHHHHCCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PLEGVDEYFIVRENARRLNKVALTVLEGLIERFSARGNVVFHDAEPGLIMKLFSNREALN CCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEHHHHCCCHHHH WLNNIYGLLSEYDVVVTESYNNAATPIEASLDSDLVLVTAPTRLLIYRGTRYRQGVEAFS HHHHHHHHHHCCCEEEEECCCCCCCCEECCCCCCEEEEECCCEEEEECCCCHHHCHHHHH MGRPPWLVDVGGIVEVLGEPLKTMDIPYSNTSEFNDFIDLLVEFITSYQ CCCCCEEEEHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA