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The map label for this gene is 218883729

Identifier: 218883729

GI number: 218883729

Start: 390423

End: 390866

Strand: Reverse

Name: 218883729

Synonym: DKAM_0418

Alternate gene names: NA

Gene position: 390866-390423 (Counterclockwise)

Preceding gene: 218883730

Following gene: 218883728

Centisome position: 28.63

GC content: 44.14

Gene sequence:

>444_bases
GTGGAGGAAAAGCTTAGCTTCATGGATAAATATGTGATTGAGAAAGGCTTTGTTAAACCAAATAGAAGGCTCTTCACTAT
TAGATCAGAGCATGTGAGACAAGTGTTCACAGAGTTTATTGAGAAGCTGGGAAGGGAGAACTTCTATCTCTCAACAATAG
TCGGCACCGATATGAAGGATGAGGGGAGGATACGGCTGGACTACTATGTTGTACTACTCCCCGAGGAGGAAACTATTGTT
ATACGAACCTATCTACCCCGCGATAATCCTGTGGTAGACTCCATAATAGACTTACTACCGGGGGCTCTATCAGGTGAATG
CGAAACATATGATCTTCTCGGAGTGGTTTTCAAGGGTAATTCATTCTTAAAGCGCGGCTTCTTCATCCCGCAGGATTTAG
TTGAACAGGATAGGTATCCCCTGAGAAAAGATAGCGGGGTGTAG

Upstream 100 bases:

>100_bases
TCAATGTATATCCCGGGATGCCCTCCACGCCCGGAGGCCATTCTAGATGGTATTGTGAAGCTCCTTAAGAAGCTTGAGAG
TGGCGAGAGCGGTGATGGCT

Downstream 100 bases:

>100_bases
ACGTATGGCTGTAACAAAGATAATCGAGGTCCCATTCACACTAGAGATTCCTGTAGGACCCCAACATCCCGCCCTCCACG
AGCCCGTATTATTGAAGGCT

Product: NADH dehydrogenase (ubiquinone), 30 kDa subunit

Products: NA

Alternate protein names: NAD(P)H-Quinone Oxidoreductase Subunit J

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MEEKLSFMDKYVIEKGFVKPNRRLFTIRSEHVRQVFTEFIEKLGRENFYLSTIVGTDMKDEGRIRLDYYVVLLPEEETIV
IRTYLPRDNPVVDSIIDLLPGALSGECETYDLLGVVFKGNSFLKRGFFIPQDLVEQDRYPLRKDSGV

Sequences:

>Translated_147_residues
MEEKLSFMDKYVIEKGFVKPNRRLFTIRSEHVRQVFTEFIEKLGRENFYLSTIVGTDMKDEGRIRLDYYVVLLPEEETIV
IRTYLPRDNPVVDSIIDLLPGALSGECETYDLLGVVFKGNSFLKRGFFIPQDLVEQDRYPLRKDSGV
>Mature_147_residues
MEEKLSFMDKYVIEKGFVKPNRRLFTIRSEHVRQVFTEFIEKLGRENFYLSTIVGTDMKDEGRIRLDYYVVLLPEEETIV
IRTYLPRDNPVVDSIIDLLPGALSGECETYDLLGVVFKGNSFLKRGFFIPQDLVEQDRYPLRKDSGV

Specific function: Unknown

COG id: COG0852

COG function: function code C; NADH:ubiquinone oxidoreductase 27 kD subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17177; Mature: 17177

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKLSFMDKYVIEKGFVKPNRRLFTIRSEHVRQVFTEFIEKLGRENFYLSTIVGTDMKD
CCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
EGRIRLDYYVVLLPEEETIVIRTYLPRDNPVVDSIIDLLPGALSGECETYDLLGVVFKGN
CCEEEEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEEECCC
SFLKRGFFIPQDLVEQDRYPLRKDSGV
HHHHCCCCCCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MEEKLSFMDKYVIEKGFVKPNRRLFTIRSEHVRQVFTEFIEKLGRENFYLSTIVGTDMKD
CCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
EGRIRLDYYVVLLPEEETIVIRTYLPRDNPVVDSIIDLLPGALSGECETYDLLGVVFKGN
CCEEEEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEEECCC
SFLKRGFFIPQDLVEQDRYPLRKDSGV
HHHHCCCCCCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA