| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883624
Identifier: 218883624
GI number: 218883624
Start: 288907
End: 289572
Strand: Reverse
Name: 218883624
Synonym: DKAM_0313
Alternate gene names: NA
Gene position: 289572-288907 (Counterclockwise)
Preceding gene: 218883625
Following gene: 218883623
Centisome position: 21.21
GC content: 59.76
Gene sequence:
>666_bases GTGAACATTGACGCCCATATATTTTTGGCAAATACGATCTCTGAAAGACTCAGGGTCTTCTACGCGTACTTCTACCCGTC GACCGTGCTCTACCTCAACCAGACAACAGGTAACGTGACGGTCTCGCAGGGGTCTACACCCGGTCTCCGGCTCGTCGGGT GGTCGGGCTACACGGTCACACTAAGCCTGCCCGGCGTCACCGTGGACAACCTCTACGTCCCCTTCGACGACATGGTGCTC AACATAACCGTCCCCGCCGCAACAAGCGTCATGATCTCCGTGGACCCGGTCAAGAGGGTCGCGCTGGTGCAGAACTACAG CCCGCCCCCAAGTCTTCACCACGTCCGTTGCGGTGACAGTGCCCGGGGTGCCTCCACAGCTCGTCGTAGCCCCGAGCGTG GGGCTGGACCTGAAGGCTTGGCACACACAGCTGTTGTTCTACACCACCTTCGCGGCGCTGGGCGTCGCCACGTACATGCA GACGAGGAAGCCGAGCTACGCGCTCTACGTCCCCGGCGTCGCGGCGCTACTCTACGGGGTCGCGATCTTGGACAGGACGG TCGTCGCGGTCGCCACGCTTGTTCTGATGGTCGCCCTCGTGGTCTCGCTCATGCTCGAATGAGCCCTGCTTACTCCTTTA TTAATGATATTGAAAGTAATATGTAG
Upstream 100 bases:
>100_bases GAATCAAATACAACATATTTATCGATCCCGTGAGGAAACTCGAGTTCAATAAAACATATCATAAACCTAGAGAATTAATC CTAGCACTGTAAGTAGTATT
Downstream 100 bases:
>100_bases TATTGAAACACCCGAACCATGCGGTGCTGCCACATGGTCGTCATCCTCTCGATGGTGACCTTCCGCTCCGTCGAGCGGCT TGGAAGAGATCTCTTTTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MNIDAHIFLANTISERLRVFYAYFYPSTVLYLNQTTGNVTVSQGSTPGLRLVGWSGYTVTLSLPGVTVDNLYVPFDDMVL NITVPAATSVMISVDPVKRVALVQNYSPPPSLHHVRCGDSARGASTARRSPERGAGPEGLAHTAVVLHHLRGAGRRHVHA DEEAELRALRPRRRGATLRGRDLGQDGRRGRHACSDGRPRGLAHARMSPAYSFINDIESNM
Sequences:
>Translated_221_residues MNIDAHIFLANTISERLRVFYAYFYPSTVLYLNQTTGNVTVSQGSTPGLRLVGWSGYTVTLSLPGVTVDNLYVPFDDMVL NITVPAATSVMISVDPVKRVALVQNYSPPPSLHHVRCGDSARGASTARRSPERGAGPEGLAHTAVVLHHLRGAGRRHVHA DEEAELRALRPRRRGATLRGRDLGQDGRRGRHACSDGRPRGLAHARMSPAYSFINDIESNM >Mature_221_residues MNIDAHIFLANTISERLRVFYAYFYPSTVLYLNQTTGNVTVSQGSTPGLRLVGWSGYTVTLSLPGVTVDNLYVPFDDMVL NITVPAATSVMISVDPVKRVALVQNYSPPPSLHHVRCGDSARGASTARRSPERGAGPEGLAHTAVVLHHLRGAGRRHVHA DEEAELRALRPRRRGATLRGRDLGQDGRRGRHACSDGRPRGLAHARMSPAYSFINDIESNM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24149; Mature: 24149
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIDAHIFLANTISERLRVFYAYFYPSTVLYLNQTTGNVTVSQGSTPGLRLVGWSGYTVT CCCCEEEEEHHHHHHHHHHHHEEECCCEEEEEECCCCEEEEECCCCCCEEEEEECCEEEE LSLPGVTVDNLYVPFDDMVLNITVPAATSVMISVDPVKRVALVQNYSPPPSLHHVRCGDS EEECCEEECCEEECCCCEEEEEECCCCEEEEEEECCHHHHHHHHCCCCCCCCEEEECCCC ARGASTARRSPERGAGPEGLAHTAVVLHHLRGAGRRHVHADEEAELRALRPRRRGATLRG CCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCHHHCCCCCCC RDLGQDGRRGRHACSDGRPRGLAHARMSPAYSFINDIESNM CCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MNIDAHIFLANTISERLRVFYAYFYPSTVLYLNQTTGNVTVSQGSTPGLRLVGWSGYTVT CCCCEEEEEHHHHHHHHHHHHEEECCCEEEEEECCCCEEEEECCCCCCEEEEEECCEEEE LSLPGVTVDNLYVPFDDMVLNITVPAATSVMISVDPVKRVALVQNYSPPPSLHHVRCGDS EEECCEEECCEEECCCCEEEEEECCCCEEEEEEECCHHHHHHHHCCCCCCCCEEEECCCC ARGASTARRSPERGAGPEGLAHTAVVLHHLRGAGRRHVHADEEAELRALRPRRRGATLRG CCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCHHHCCCCCCC RDLGQDGRRGRHACSDGRPRGLAHARMSPAYSFINDIESNM CCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA