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The map label for this gene is gap [H]

Identifier: 218883498

GI number: 218883498

Start: 173154

End: 174215

Strand: Direct

Name: gap [H]

Synonym: DKAM_0185

Alternate gene names: 218883498

Gene position: 173154-174215 (Clockwise)

Preceding gene: 218883497

Following gene: 218883499

Centisome position: 12.68

GC content: 45.67

Gene sequence:

>1062_bases
ATGGTAGCCATGTCTGTTAAAGTAGCTGTAAATGGCTCGGGAACCATAGGTAAGAGAATTGTTGACTCAGTATTGTTGAA
CAAGGACTTTAAGCTAGTTGGAGTCGCCAAGTATAAGCCGGATTACCAGGCATACCTAATGATAGAGAAAGGTATACCAG
TGTTTGTTCCACGGGATAGAGCAGGGGAATTTATTAACTCGGGCATCGAGCCAAGTGGATACATAGACTACCTGTTTGAA
GAAGCAGATCTAATATATGACGCCTCACCAGGTGGTAAAGGTGTATTAAATAAGAAGATATATGAGAAACACGGCAAACC
AGTTGTCTTCCAGGGAGGCGAGGACCCAGAGATAGCTGAGATCAGCTATAGTACGTTCTGTAATTACAGTGATGCAATAA
ATAAGAAAAATGTAAGGGTCGTCAGCTGTAATACAACAGGTATGCTGAGACTGCTATGTATACTAGAAAAGGAGTATGGT
GTCAAGAAGGCGCTGGCAGTAATTATCAGGAGAGCGGCGGATCCCAAGGAGGATAACAAGGGCCCCGTCAACTCCATACT
ACTGGATCCCCCGGAGATACCTAGTCACCACGGGGTAGATGCCCGTACAGTGGCTCCATGGCTTAATATCACGAGCGCTG
CCGTCGTGGTTCCAACAACCCTTATGCATATGCAGTTTATAGAGGTCGAGCTAAAGTCCCCTGTCAAGAAGGATGAGGTG
CTGGAGGTGCTAGGAAGATATAGGAGGTTTCTACTTATAGATTCAACTCGGACAGGCATCGATTCCACCAGTAAGCTCAT
GGAACTAGCCAGAGATGCTGGTAGGATGCGTGGTGACATATATGAGAACTCAGTGTTCATCGATACAGTCAAGATCGAGG
ATACACGGCTCTACATGTTCCAGGGGATCCACCAGGAGTCAATTGTTATCCCGGAAAACATGGATGTAGCATACGCGATA
CTGGGCCTTGAACACGACCAGTATAGGGTTGTGGAGAAAACAGATAGCCTACTGGGAATCGGTTCCCTGGAAAAATTGAT
TAAGACAAGTAGACATAGATAA

Upstream 100 bases:

>100_bases
TACATGTGTCAACAGGCGGCAACGCACTCCTACTATTCCTCTCCGGCGAAGAACTCCCAGCGTTAAAGGCACTGGAGTTA
TCGGCTAAAATGTTCCTGGG

Downstream 100 bases:

>100_bases
AAAGGTGAGAACCATGAGTGAAGCACCTACATACGAGATAAGCTTCTACTTCAGGAAAATCCTTGTCCCAGTGGATGGGA
GCGAGAATAGTTTGAAAGCG

Product: glyceraldehyde-3-phosphate dehydrogenase

Products: NA

Alternate protein names: GAPDH; NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase [H]

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MVAMSVKVAVNGSGTIGKRIVDSVLLNKDFKLVGVAKYKPDYQAYLMIEKGIPVFVPRDRAGEFINSGIEPSGYIDYLFE
EADLIYDASPGGKGVLNKKIYEKHGKPVVFQGGEDPEIAEISYSTFCNYSDAINKKNVRVVSCNTTGMLRLLCILEKEYG
VKKALAVIIRRAADPKEDNKGPVNSILLDPPEIPSHHGVDARTVAPWLNITSAAVVVPTTLMHMQFIEVELKSPVKKDEV
LEVLGRYRRFLLIDSTRTGIDSTSKLMELARDAGRMRGDIYENSVFIDTVKIEDTRLYMFQGIHQESIVIPENMDVAYAI
LGLEHDQYRVVEKTDSLLGIGSLEKLIKTSRHR

Sequences:

>Translated_353_residues
MVAMSVKVAVNGSGTIGKRIVDSVLLNKDFKLVGVAKYKPDYQAYLMIEKGIPVFVPRDRAGEFINSGIEPSGYIDYLFE
EADLIYDASPGGKGVLNKKIYEKHGKPVVFQGGEDPEIAEISYSTFCNYSDAINKKNVRVVSCNTTGMLRLLCILEKEYG
VKKALAVIIRRAADPKEDNKGPVNSILLDPPEIPSHHGVDARTVAPWLNITSAAVVVPTTLMHMQFIEVELKSPVKKDEV
LEVLGRYRRFLLIDSTRTGIDSTSKLMELARDAGRMRGDIYENSVFIDTVKIEDTRLYMFQGIHQESIVIPENMDVAYAI
LGLEHDQYRVVEKTDSLLGIGSLEKLIKTSRHR
>Mature_353_residues
MVAMSVKVAVNGSGTIGKRIVDSVLLNKDFKLVGVAKYKPDYQAYLMIEKGIPVFVPRDRAGEFINSGIEPSGYIDYLFE
EADLIYDASPGGKGVLNKKIYEKHGKPVVFQGGEDPEIAEISYSTFCNYSDAINKKNVRVVSCNTTGMLRLLCILEKEYG
VKKALAVIIRRAADPKEDNKGPVNSILLDPPEIPSHHGVDARTVAPWLNITSAAVVVPTTLMHMQFIEVELKSPVKKDEV
LEVLGRYRRFLLIDSTRTGIDSTSKLMELARDAGRMRGDIYENSVFIDTVKIEDTRLYMFQGIHQESIVIPENMDVAYAI
LGLEHDQYRVVEKTDSLLGIGSLEKLIKTSRHR

Specific function: Unknown

COG id: COG0057

COG function: function code G; Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020831
- InterPro:   IPR020830
- InterPro:   IPR020829
- InterPro:   IPR020828
- InterPro:   IPR006436
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02800 Gp_dh_C; PF00044 Gp_dh_N [H]

EC number: =1.2.1.59 [H]

Molecular weight: Translated: 39383; Mature: 39383

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: PS00071 GAPDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAMSVKVAVNGSGTIGKRIVDSVLLNKDFKLVGVAKYKPDYQAYLMIEKGIPVFVPRDR
CEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEECCCEEEEECCH
AGEFINSGIEPSGYIDYLFEEADLIYDASPGGKGVLNKKIYEKHGKPVVFQGGEDPEIAE
HHHHHHCCCCCCCHHHHHCCCCCEEEECCCCCCCCHHHHHHHHCCCEEEEECCCCCCEEE
ISYSTFCNYSDAINKKNVRVVSCNTTGMLRLLCILEKEYGVKKALAVIIRRAADPKEDNK
EEHHHHCCCHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC
GPVNSILLDPPEIPSHHGVDARTVAPWLNITSAAVVVPTTLMHMQFIEVELKSPVKKDEV
CCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHEEEHCCCCCCHHHH
LEVLGRYRRFLLIDSTRTGIDSTSKLMELARDAGRMRGDIYENSVFIDTVKIEDTRLYMF
HHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEECCCEEEEEEEEECCEEEEE
QGIHQESIVIPENMDVAYAILGLEHDQYRVVEKTDSLLGIGSLEKLIKTSRHR
ECCCCCCEECCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MVAMSVKVAVNGSGTIGKRIVDSVLLNKDFKLVGVAKYKPDYQAYLMIEKGIPVFVPRDR
CEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEECCCEEEEECCH
AGEFINSGIEPSGYIDYLFEEADLIYDASPGGKGVLNKKIYEKHGKPVVFQGGEDPEIAE
HHHHHHCCCCCCCHHHHHCCCCCEEEECCCCCCCCHHHHHHHHCCCEEEEECCCCCCEEE
ISYSTFCNYSDAINKKNVRVVSCNTTGMLRLLCILEKEYGVKKALAVIIRRAADPKEDNK
EEHHHHCCCHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC
GPVNSILLDPPEIPSHHGVDARTVAPWLNITSAAVVVPTTLMHMQFIEVELKSPVKKDEV
CCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHEEEHCCCCCCHHHH
LEVLGRYRRFLLIDSTRTGIDSTSKLMELARDAGRMRGDIYENSVFIDTVKIEDTRLYMF
HHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEECCCEEEEEEEEECCEEEEE
QGIHQESIVIPENMDVAYAILGLEHDQYRVVEKTDSLLGIGSLEKLIKTSRHR
ECCCCCCEECCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]