| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883462
Identifier: 218883462
GI number: 218883462
Start: 134493
End: 135005
Strand: Direct
Name: 218883462
Synonym: DKAM_0148
Alternate gene names: NA
Gene position: 134493-135005 (Clockwise)
Preceding gene: 218883461
Following gene: 218883467
Centisome position: 9.85
GC content: 45.42
Gene sequence:
>513_bases ATGGATATAGAGTCCTATATTGTCTGGATCGTTAAATACTACTTGCCAGCAATGATCGCTAATGCCTCTCCACTACTAGT GAAGGGTGATAAAGTCATAGATAAGGGGAGACTGTTCATTGATGGTAAACCTATTCTAGGGAATCACAAGACCTGGGAGG GGTTTGCAATAGGGGTGATCAACTCATATTTAACTGGTTCAGCCGTGGGGATAGCCTTCGGGGATCCCTGTATACAAGTA CTCTCAGTAGTAGCTGGTGTTTCAAGCATGCTCGGAGACCTAGTAGGGGCCTTTATAAAACGAAGGCTTGGATTAAAACC GGGGAGACCTCTACCTATAATTGACCAGCTTAGTTTTGCATTGATGACGACTCTCTCATACCTTCTTCTCGGTGTAGTGG ATGTTATAAGCCGTCCCGACTACGTGCTATCAACGCTCGCGTTAATATTCATCCTACATGTGGCGGCGAACAATATCGCC TACATGCTTGGAGTGAAGGAGACAAGGTGGTAA
Upstream 100 bases:
>100_bases TAAATATAGGGGACTCAGTGAGATATGCTAGGATAGTTAAGCCAAAGCACATGGGCGGGGAGAAGATTCATCGCTTTAGA ATAACAAGGGAGGGTGTAGA
Downstream 100 bases:
>100_bases CTCTCAGCCAAGAGCACTCCTCGTAATTATATCTAGTAGTCTTTCAACTTCTCTCTCCACAGTTAATGGTATACCCGGTG CCTTTATACTCATGAAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MDIESYIVWIVKYYLPAMIANASPLLVKGDKVIDKGRLFIDGKPILGNHKTWEGFAIGVINSYLTGSAVGIAFGDPCIQV LSVVAGVSSMLGDLVGAFIKRRLGLKPGRPLPIIDQLSFALMTTLSYLLLGVVDVISRPDYVLSTLALIFILHVAANNIA YMLGVKETRW
Sequences:
>Translated_170_residues MDIESYIVWIVKYYLPAMIANASPLLVKGDKVIDKGRLFIDGKPILGNHKTWEGFAIGVINSYLTGSAVGIAFGDPCIQV LSVVAGVSSMLGDLVGAFIKRRLGLKPGRPLPIIDQLSFALMTTLSYLLLGVVDVISRPDYVLSTLALIFILHVAANNIA YMLGVKETRW >Mature_170_residues MDIESYIVWIVKYYLPAMIANASPLLVKGDKVIDKGRLFIDGKPILGNHKTWEGFAIGVINSYLTGSAVGIAFGDPCIQV LSVVAGVSSMLGDLVGAFIKRRLGLKPGRPLPIIDQLSFALMTTLSYLLLGVVDVISRPDYVLSTLALIFILHVAANNIA YMLGVKETRW
Specific function: Unknown
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0290 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002726 [H]
Pfam domain/function: PF01864 DUF46 [H]
EC number: NA
Molecular weight: Translated: 18479; Mature: 18479
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIESYIVWIVKYYLPAMIANASPLLVKGDKVIDKGRLFIDGKPILGNHKTWEGFAIGVI CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECCEEEECCCCCCCCCCCCCCCHHHHH NSYLTGSAVGIAFGDPCIQVLSVVAGVSSMLGDLVGAFIKRRLGLKPGRPLPIIDQLSFA HHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH LMTTLSYLLLGVVDVISRPDYVLSTLALIFILHVAANNIAYMLGVKETRW HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCC >Mature Secondary Structure MDIESYIVWIVKYYLPAMIANASPLLVKGDKVIDKGRLFIDGKPILGNHKTWEGFAIGVI CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECCEEEECCCCCCCCCCCCCCCHHHHH NSYLTGSAVGIAFGDPCIQVLSVVAGVSSMLGDLVGAFIKRRLGLKPGRPLPIIDQLSFA HHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH LMTTLSYLLLGVVDVISRPDYVLSTLALIFILHVAANNIAYMLGVKETRW HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA