| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883449
Identifier: 218883449
GI number: 218883449
Start: 122419
End: 122955
Strand: Reverse
Name: 218883449
Synonym: DKAM_0135
Alternate gene names: NA
Gene position: 122955-122419 (Counterclockwise)
Preceding gene: 218883450
Following gene: 218883447
Centisome position: 9.01
GC content: 42.64
Gene sequence:
>537_bases ATGTTTAGGAGAAGCAGGGATCCTTTGAGAAAGGCCTTAGAGACGCTTTACCATGTAAGGCTGTTAAGAAATAAAATCGA CATGTTGTACAATAGGGTTAGTGAGAGAAGAGACGTGCTCTTTGAGAAACTAACTGACCTAGAGTCCAAGGGCGAGAAAT ACCTTGCAAAACGATACGCCGAGGAAATAGCTAAGCTCGATAAATTGCTTGCAAGGCTTGCGGCCGTGCAGCTGATATTA GAGAAAATAGACCTAGCACTCCAGTATGCTATAAACATGAGGGAGTTCTCGGGGCTAGCTTCGGAGATAAATAACTTGGT TAAAGACATGTCAAAGATACCGGAGCTCAATATACCTGACTTAAACCTAGTATTCATCGAGCTACAAGCATCAGCTAGAG AACTGAGTGAGGCAAGTGAGGCGAATAGCGTTGTAGACATTAACTACTCTATCTCGGAGGGAAGCGATGTAAAAAGAATA CTGGAAGAGGCTAGGGAAGTTATGAAGAAGAAACTTGAGAACGAGTTAACAGTTTAG
Upstream 100 bases:
>100_bases TATCATAGTGTTCTATCAATTAAACCCCGTATCCTGAAACCCTTTTTCTTTTAAAGCATTTACAAACCCATAATATGGTT AGGTAGCAAGGTGCTGACGA
Downstream 100 bases:
>100_bases GCATGCTTAAAAAAGATGGACAACCACTATAATTGCAGGGTATATCTTCTCTCTTCTCTAACAGTAGCAAAGCGTATTTT AAACCGGTCCAGCGTATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MFRRSRDPLRKALETLYHVRLLRNKIDMLYNRVSERRDVLFEKLTDLESKGEKYLAKRYAEEIAKLDKLLARLAAVQLIL EKIDLALQYAINMREFSGLASEINNLVKDMSKIPELNIPDLNLVFIELQASARELSEASEANSVVDINYSISEGSDVKRI LEEAREVMKKKLENELTV
Sequences:
>Translated_178_residues MFRRSRDPLRKALETLYHVRLLRNKIDMLYNRVSERRDVLFEKLTDLESKGEKYLAKRYAEEIAKLDKLLARLAAVQLIL EKIDLALQYAINMREFSGLASEINNLVKDMSKIPELNIPDLNLVFIELQASARELSEASEANSVVDINYSISEGSDVKRI LEEAREVMKKKLENELTV >Mature_178_residues MFRRSRDPLRKALETLYHVRLLRNKIDMLYNRVSERRDVLFEKLTDLESKGEKYLAKRYAEEIAKLDKLLARLAAVQLIL EKIDLALQYAINMREFSGLASEINNLVKDMSKIPELNIPDLNLVFIELQASARELSEASEANSVVDINYSISEGSDVKRI LEEAREVMKKKLENELTV
Specific function: Unknown
COG id: COG5491
COG function: function code N; Conserved protein implicated in secretion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20613; Mature: 20613
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRRSRDPLRKALETLYHVRLLRNKIDMLYNRVSERRDVLFEKLTDLESKGEKYLAKRYA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEIAKLDKLLARLAAVQLILEKIDLALQYAINMREFSGLASEINNLVKDMSKIPELNIPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LNLVFIELQASARELSEASEANSVVDINYSISEGSDVKRILEEAREVMKKKLENELTV CEEEEEEEHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFRRSRDPLRKALETLYHVRLLRNKIDMLYNRVSERRDVLFEKLTDLESKGEKYLAKRYA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEIAKLDKLLARLAAVQLILEKIDLALQYAINMREFSGLASEINNLVKDMSKIPELNIPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LNLVFIELQASARELSEASEANSVVDINYSISEGSDVKRILEEAREVMKKKLENELTV CEEEEEEEHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA