| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883440
Identifier: 218883440
GI number: 218883440
Start: 114100
End: 115311
Strand: Direct
Name: 218883440
Synonym: DKAM_0126
Alternate gene names: NA
Gene position: 114100-115311 (Clockwise)
Preceding gene: 218883438
Following gene: 218883446
Centisome position: 8.36
GC content: 44.47
Gene sequence:
>1212_bases GTGGGTAGGATGTCAAGCGGCTTTGCTGAGCTACCCCTGCATGATGGACATGTGCCATTGTTTCTGCTTGAGAGAATGAA GAAGCTCGGTGGATTAATAGCTAGATATATTGTTGAATACTATGGCCCGAGGGAATTATTAACCCGTCTCTCAGACCCAT TATGGTTCCAGGCATTCAACAATGTCATCGGTATGGACTGGGATAGCAGTGGATCAACCACAATTGTTTTATATGTGTTG AAAAACATGTTCCCACCAAGTATGTTTAGAGATAACGAGATAGCTGTCTTGGGCGGTAAGGGACGTGATTCACGCAATGT GGTCGAAGAAGCATGGTTAGTGGGAGATGTAGTTGACTACAATACCGTTGTTGACACCAGTAGAATGGCTGCCAAAATAG ATGGGGTGGCCCTTCAAGATGGCTACAGTCTCTATATTCATGGCTTGGTCATTGATTCCAGGGGAGGAATACTCGTTATA CAGCAGGGCTTAAATGAGGAGTTAGGGATAGCTAGACGCTACCATATCTTCACCAGTAGCCACCCGTTAACGACCAACAG AGACCCGCATTCCGGTGTAGCGTCAGTGAAGATGGAGCCCTCACTCAACCTCGTTGATGCAGACAGCCTAAATGCACGGA GAGCGATTGTTGAGATAATTGCATCAACCCCGGTTAATTCTCTGCTTCAAAATATTGGGGAAGTTAACCGTCTCCTCCGG GGCGAACACTCTATTCTTTCATGGAGTAATAGTGGATCTATTACTAGGAAAACAGGAAACCGGAATTTAATCAAGGAGTG TCCCAGATACTATCGCCCAGTATCTAATATTAGGTTAATGGAGAAAATAGCTGAGGAGATAAAGGAGAGGGGTTTAAGGG AGTTTGACGAATTACTACGTATACAGGGTGTTGGTGCTGAGACCATAAGGGCTCTAGCACTGGTGGCTGACCTTATATAT GGCTACAGGCCATCGCTTAGGGATCCCACAACGAGTATCATGGATCCATTTATATATGCATATGCCCATGGAGGTAAAGA CGGTGTACCATACCCTATTAAGGTAGAGCATATTGATAAAACAATAGATTTCTTCATCAAACTGCTGAGCGATTTAAAAA CGGGGAATAAGGAGAGGGAATATATGCTGAAGAAATTGGCATCGTTTGCAGGCAAGATAAAACTACGGTATCTAGATGCC TCAGGAGATTAG
Upstream 100 bases:
>100_bases GGCTTTAATGGATGGGGGTGTGAAACCATTTGACGTTGCTACCCTAGATTAATAATCATGGTTTAAAGGATGGTTTATAC CTATTTAATAATGGGGATAA
Downstream 100 bases:
>100_bases AGGGATTTCTCAATTATATCTCTTAAGACATCGCTACTGGGTTTAAATGGTATAGACGTATACCGCGTGTTGATCATTCT CACGGCGAACTCTATTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MGRMSSGFAELPLHDGHVPLFLLERMKKLGGLIARYIVEYYGPRELLTRLSDPLWFQAFNNVIGMDWDSSGSTTIVLYVL KNMFPPSMFRDNEIAVLGGKGRDSRNVVEEAWLVGDVVDYNTVVDTSRMAAKIDGVALQDGYSLYIHGLVIDSRGGILVI QQGLNEELGIARRYHIFTSSHPLTTNRDPHSGVASVKMEPSLNLVDADSLNARRAIVEIIASTPVNSLLQNIGEVNRLLR GEHSILSWSNSGSITRKTGNRNLIKECPRYYRPVSNIRLMEKIAEEIKERGLREFDELLRIQGVGAETIRALALVADLIY GYRPSLRDPTTSIMDPFIYAYAHGGKDGVPYPIKVEHIDKTIDFFIKLLSDLKTGNKEREYMLKKLASFAGKIKLRYLDA SGD
Sequences:
>Translated_403_residues MGRMSSGFAELPLHDGHVPLFLLERMKKLGGLIARYIVEYYGPRELLTRLSDPLWFQAFNNVIGMDWDSSGSTTIVLYVL KNMFPPSMFRDNEIAVLGGKGRDSRNVVEEAWLVGDVVDYNTVVDTSRMAAKIDGVALQDGYSLYIHGLVIDSRGGILVI QQGLNEELGIARRYHIFTSSHPLTTNRDPHSGVASVKMEPSLNLVDADSLNARRAIVEIIASTPVNSLLQNIGEVNRLLR GEHSILSWSNSGSITRKTGNRNLIKECPRYYRPVSNIRLMEKIAEEIKERGLREFDELLRIQGVGAETIRALALVADLIY GYRPSLRDPTTSIMDPFIYAYAHGGKDGVPYPIKVEHIDKTIDFFIKLLSDLKTGNKEREYMLKKLASFAGKIKLRYLDA SGD >Mature_402_residues GRMSSGFAELPLHDGHVPLFLLERMKKLGGLIARYIVEYYGPRELLTRLSDPLWFQAFNNVIGMDWDSSGSTTIVLYVLK NMFPPSMFRDNEIAVLGGKGRDSRNVVEEAWLVGDVVDYNTVVDTSRMAAKIDGVALQDGYSLYIHGLVIDSRGGILVIQ QGLNEELGIARRYHIFTSSHPLTTNRDPHSGVASVKMEPSLNLVDADSLNARRAIVEIIASTPVNSLLQNIGEVNRLLRG EHSILSWSNSGSITRKTGNRNLIKECPRYYRPVSNIRLMEKIAEEIKERGLREFDELLRIQGVGAETIRALALVADLIYG YRPSLRDPTTSIMDPFIYAYAHGGKDGVPYPIKVEHIDKTIDFFIKLLSDLKTGNKEREYMLKKLASFAGKIKLRYLDAS GD
Specific function: Unknown
COG id: COG1415
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45162; Mature: 45030
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRMSSGFAELPLHDGHVPLFLLERMKKLGGLIARYIVEYYGPRELLTRLSDPLWFQAFN CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHH NVIGMDWDSSGSTTIVLYVLKNMFPPSMFRDNEIAVLGGKGRDSRNVVEEAWLVGDVVDY CCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCC NTVVDTSRMAAKIDGVALQDGYSLYIHGLVIDSRGGILVIQQGLNEELGIARRYHIFTSS CHHHHHHHHHHHHCCEEEECCCEEEEEEEEEECCCCEEEEECCCCCHHCCCEEEEEEECC HPLTTNRDPHSGVASVKMEPSLNLVDADSLNARRAIVEIIASTPVNSLLQNIGEVNRLLR CCCCCCCCCCCCCEEEEECCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC GEHSILSWSNSGSITRKTGNRNLIKECPRYYRPVSNIRLMEKIAEEIKERGLREFDELLR CCCCEEEECCCCCEEEECCCCCHHHHCHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHH IQGVGAETIRALALVADLIYGYRPSLRDPTTSIMDPFIYAYAHGGKDGVPYPIKVEHIDK HCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEECCCCCCCCCCEEHHHHHH TIDFFIKLLSDLKTGNKEREYMLKKLASFAGKIKLRYLDASGD HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEEEEEECCCCC >Mature Secondary Structure GRMSSGFAELPLHDGHVPLFLLERMKKLGGLIARYIVEYYGPRELLTRLSDPLWFQAFN CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHH NVIGMDWDSSGSTTIVLYVLKNMFPPSMFRDNEIAVLGGKGRDSRNVVEEAWLVGDVVDY CCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCC NTVVDTSRMAAKIDGVALQDGYSLYIHGLVIDSRGGILVIQQGLNEELGIARRYHIFTSS CHHHHHHHHHHHHCCEEEECCCEEEEEEEEEECCCCEEEEECCCCCHHCCCEEEEEEECC HPLTTNRDPHSGVASVKMEPSLNLVDADSLNARRAIVEIIASTPVNSLLQNIGEVNRLLR CCCCCCCCCCCCCEEEEECCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC GEHSILSWSNSGSITRKTGNRNLIKECPRYYRPVSNIRLMEKIAEEIKERGLREFDELLR CCCCEEEECCCCCEEEECCCCCHHHHCHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHH IQGVGAETIRALALVADLIYGYRPSLRDPTTSIMDPFIYAYAHGGKDGVPYPIKVEHIDK HCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEECCCCCCCCCCEEHHHHHH TIDFFIKLLSDLKTGNKEREYMLKKLASFAGKIKLRYLDASGD HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA