| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883386
Identifier: 218883386
GI number: 218883386
Start: 65573
End: 66220
Strand: Direct
Name: 218883386
Synonym: DKAM_0072
Alternate gene names: NA
Gene position: 65573-66220 (Clockwise)
Preceding gene: 218883383
Following gene: 218883387
Centisome position: 4.8
GC content: 40.74
Gene sequence:
>648_bases ATGGTGGATAGGGATGGATTCAACGAGTTCTTCAGTAAAGTAGTGGGAAAACTAGAGGTAGATAAGTTATTGGAGAGTAT AGGGGGCTTAGTGAAGTCTAGGTTGCAACATGGTATCAATGAGTTGGAGTGCAGTATATCGATCCTAGATACATTGAGCG AGATAGGGTTAGCCGATAAGGTGTACAGGGTTATTGATGCGTTGCTCTCGAAGTTAATAAAGGTTGGGAACCTGGGTGGA CAGTATGTGAGACTCCTTGAATACATTATAGATGGCCCCTTTGAAAACATGCCACCACTTGAATCAGCGTTTTTCATGGA GAGACTCATTGAAATGAATGGTGACATATGGCTTGCAGTAAAGATAAGGACTATTAGGGAGGCTAGCATAGTCAAAAACC CTGGGTTCATGGCTGAATACAGGTACTTATATGCACTAGTGAACCTAGTCGATAACGTGTTAACCACTTTACTTGAATCA AAGCCTATGGAGGCACATAAATATTATAGTGATTTAAACACCGCTTACACGCATATATGGAAGAATTGTGTTGTTAATCA ACCAAGGAACACCTGCATCAAACTACTTGAGGGAATAAGTGGAAAACTAGCTACACTAGCTGAATTAACACAGGGATTCA GTAAGTAG
Upstream 100 bases:
>100_bases ATCGGAAGGATATGTGGAAGCCTTGTCAAGAACCCTTATACGAGATGAGGATCCTGGGTCACTATCTACTATTCTGAATA CTTTGTGTACGGTGAAACAG
Downstream 100 bases:
>100_bases TCTTAGAGGGTATCAGAGTGATTGGTGATGTATTACTAGTAAATACGCTCATAATTTTTGCTTTATCAATAGTGGGCATT ATTCCAGTTCTAGTAGGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MVDRDGFNEFFSKVVGKLEVDKLLESIGGLVKSRLQHGINELECSISILDTLSEIGLADKVYRVIDALLSKLIKVGNLGG QYVRLLEYIIDGPFENMPPLESAFFMERLIEMNGDIWLAVKIRTIREASIVKNPGFMAEYRYLYALVNLVDNVLTTLLES KPMEAHKYYSDLNTAYTHIWKNCVVNQPRNTCIKLLEGISGKLATLAELTQGFSK
Sequences:
>Translated_215_residues MVDRDGFNEFFSKVVGKLEVDKLLESIGGLVKSRLQHGINELECSISILDTLSEIGLADKVYRVIDALLSKLIKVGNLGG QYVRLLEYIIDGPFENMPPLESAFFMERLIEMNGDIWLAVKIRTIREASIVKNPGFMAEYRYLYALVNLVDNVLTTLLES KPMEAHKYYSDLNTAYTHIWKNCVVNQPRNTCIKLLEGISGKLATLAELTQGFSK >Mature_215_residues MVDRDGFNEFFSKVVGKLEVDKLLESIGGLVKSRLQHGINELECSISILDTLSEIGLADKVYRVIDALLSKLIKVGNLGG QYVRLLEYIIDGPFENMPPLESAFFMERLIEMNGDIWLAVKIRTIREASIVKNPGFMAEYRYLYALVNLVDNVLTTLLES KPMEAHKYYSDLNTAYTHIWKNCVVNQPRNTCIKLLEGISGKLATLAELTQGFSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24268; Mature: 24268
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDRDGFNEFFSKVVGKLEVDKLLESIGGLVKSRLQHGINELECSISILDTLSEIGLADK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHH VYRVIDALLSKLIKVGNLGGQYVRLLEYIIDGPFENMPPLESAFFMERLIEMNGDIWLAV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEE KIRTIREASIVKNPGFMAEYRYLYALVNLVDNVLTTLLESKPMEAHKYYSDLNTAYTHIW EHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH KNCVVNQPRNTCIKLLEGISGKLATLAELTQGFSK HHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MVDRDGFNEFFSKVVGKLEVDKLLESIGGLVKSRLQHGINELECSISILDTLSEIGLADK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHH VYRVIDALLSKLIKVGNLGGQYVRLLEYIIDGPFENMPPLESAFFMERLIEMNGDIWLAV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEE KIRTIREASIVKNPGFMAEYRYLYALVNLVDNVLTTLLESKPMEAHKYYSDLNTAYTHIW EHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH KNCVVNQPRNTCIKLLEGISGKLATLAELTQGFSK HHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA